RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 TRIM26Q12899 539 aaPredicted RBP29.15■■■□□ 2.26
PCOLCE-208ENST00000487172 DEPDC5O75140 1603 aa29.12■■■□□ 2.25
PCOLCE-208ENST00000487172 MADDQ8WXG6 1647 aa29.12■■■□□ 2.25
PCOLCE-208ENST00000487172 FAM135AQ9P2D6 1515 aa29.11■■■□□ 2.25
PCOLCE-208ENST00000487172 MROH1Q8NDA8 1641 aa29.11■■■□□ 2.25
PCOLCE-208ENST00000487172 FER1L4A9Z1Z3 1794 aa29.11■■■□□ 2.25
PCOLCE-208ENST00000487172 CNTLNQ9NXG0 1405 aa29.09■■■□□ 2.25
PCOLCE-208ENST00000487172 PRDM15P57071 1507 aaPredicted RBP29.09■■■□□ 2.25
PCOLCE-208ENST00000487172 ESF1Q9H501 851 aaKnown RBP29.08■■■□□ 2.25
PCOLCE-208ENST00000487172 KDM5DQ9BY66 1539 aa29.07■■■□□ 2.24
PCOLCE-208ENST00000487172 UNC13BO14795 1591 aa29.05■■■□□ 2.24
PCOLCE-208ENST00000487172 SETD5Q9C0A6 1442 aa29.04■■■□□ 2.24
PCOLCE-208ENST00000487172 RIMS1Q86UR5 1692 aaKnown RBP29.04■■■□□ 2.24
PCOLCE-208ENST00000487172 KANK1Q14678 1352 aa29.03■■■□□ 2.24
PCOLCE-208ENST00000487172 WASHC2CQ9Y4E1 1318 aa29.03■■■□□ 2.24
PCOLCE-208ENST00000487172 VWDEQ8N2E2 1590 aa29.02■■■□□ 2.24
PCOLCE-208ENST00000487172 ZC3H13Q5T200 1668 aaKnown RBP29.02■■■□□ 2.24
PCOLCE-208ENST00000487172 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.01■■■□□ 2.23
PCOLCE-208ENST00000487172 MROH2AA6NES4 1674 aa29.01■■■□□ 2.23
PCOLCE-208ENST00000487172 CLTCQ00610 1675 aaKnown RBP29.01■■■□□ 2.23
PCOLCE-208ENST00000487172 PTPRMP28827 1452 aa29■■■□□ 2.23
PCOLCE-208ENST00000487172 ABCC3O15438 1527 aa28.99■■■□□ 2.23
PCOLCE-208ENST00000487172 ACIN1Q9UKV3 1341 aaKnown RBP28.99■■■□□ 2.23
PCOLCE-208ENST00000487172 ZMYM3Q14202 1370 aa28.98■■■□□ 2.23
PCOLCE-208ENST00000487172 LMTK2Q8IWU2 1503 aa28.97■■■□□ 2.23
PCOLCE-208ENST00000487172 HRCP23327 699 aa28.95■■■□□ 2.22
PCOLCE-208ENST00000487172 NUP155O75694 1391 aa28.95■■■□□ 2.22
PCOLCE-208ENST00000487172 CEP152O94986 1710 aa28.94■■■□□ 2.22
PCOLCE-208ENST00000487172 IQGAP3Q86VI3 1631 aa28.93■■■□□ 2.22
PCOLCE-208ENST00000487172 C3P01024 1663 aa28.93■■■□□ 2.22
PCOLCE-208ENST00000487172 RAB3GAP2Q9H2M9 1393 aa28.92■■■□□ 2.22
PCOLCE-208ENST00000487172 CAMSAP1Q5T5Y3 1602 aa28.9■■■□□ 2.22
PCOLCE-208ENST00000487172 ARHGAP31Q2M1Z3 1444 aa28.89■■■□□ 2.22
PCOLCE-208ENST00000487172 CEBPAP49715 358 aaPredicted RBP28.88■■■□□ 2.21
PCOLCE-208ENST00000487172 TRIM52Q96A61 297 aa28.87■■■□□ 2.21
PCOLCE-208ENST00000487172 TET3O43151 1660 aa28.86■■■□□ 2.21
PCOLCE-208ENST00000487172 PZPP20742 1482 aa28.86■■■□□ 2.21
PCOLCE-208ENST00000487172 EFCAB6Q5THR3 1501 aa28.84■■■□□ 2.21
PCOLCE-208ENST00000487172 NPATQ14207 1427 aa28.83■■■□□ 2.21
PCOLCE-208ENST00000487172 RPRD2Q5VT52 1461 aaKnown RBP28.8■■■□□ 2.2
PCOLCE-208ENST00000487172 PLPPR3Q6T4P5 718 aa28.8■■■□□ 2.2
PCOLCE-208ENST00000487172 SETD1BQ9UPS6 1966 aaKnown RBP28.79■■■□□ 2.2
PCOLCE-208ENST00000487172 FBXO31Q5XUX0 539 aaPredicted RBP28.77■■■□□ 2.2
PCOLCE-208ENST00000487172 SLC4A1APQ9BWU0 796 aaKnown RBP28.76■■■□□ 2.19
PCOLCE-208ENST00000487172 E9PCH4 1651 aa28.76■■■□□ 2.19
PCOLCE-208ENST00000487172 SPATA31D1Q6ZQQ2 1576 aa28.75■■■□□ 2.19
PCOLCE-208ENST00000487172 AEBP2Q6ZN18 517 aaPredicted RBP28.75■■■□□ 2.19
PCOLCE-208ENST00000487172 ERVK-7P63135 1459 aa28.74■■■□□ 2.19
PCOLCE-208ENST00000487172 PREX1Q8TCU6 1659 aa28.74■■■□□ 2.19
PCOLCE-208ENST00000487172 MPHOSPH9Q99550 1183 aa28.73■■■□□ 2.19
PCOLCE-208ENST00000487172 PCGF6Q9BYE7 350 aa28.73■■■□□ 2.19
PCOLCE-208ENST00000487172 CFAP65Q6ZU64 1925 aaKnown RBP28.72■■■□□ 2.19
PCOLCE-208ENST00000487172 NOS1P29475 1434 aa28.7■■■□□ 2.19
PCOLCE-208ENST00000487172 PKD2Q13563 968 aa28.7■■■□□ 2.18
PCOLCE-208ENST00000487172 TNRQ92752 1358 aa28.7■■■□□ 2.18
PCOLCE-208ENST00000487172 PTPRTO14522 1441 aa28.64■■■□□ 2.18
PCOLCE-208ENST00000487172 UHRF1BP1Q6BDS2 1440 aa28.63■■■□□ 2.17
PCOLCE-208ENST00000487172 NLRP1Q9C000 1473 aa28.62■■■□□ 2.17
PCOLCE-208ENST00000487172 SYNMO15061 1565 aa28.62■■■□□ 2.17
PCOLCE-208ENST00000487172 SLC52A1Q9NWF4 448 aa28.61■■■□□ 2.17
PCOLCE-208ENST00000487172 MYO3AQ8NEV4 1616 aa28.61■■■□□ 2.17
PCOLCE-208ENST00000487172 SPHKAPQ2M3C7 1700 aa28.6■■■□□ 2.17
PCOLCE-208ENST00000487172 A2ML1A8K2U0 1454 aa28.56■■■□□ 2.16
PCOLCE-208ENST00000487172 ZNF142P52746 1687 aaPredicted RBP28.56■■■□□ 2.16
PCOLCE-208ENST00000487172 LMTK3Q96Q04 1460 aa28.56■■■□□ 2.16
PCOLCE-208ENST00000487172 CEP170BQ9Y4F5 1589 aaPredicted RBP28.55■■■□□ 2.16
PCOLCE-208ENST00000487172 PLA2R1Q13018 1463 aa28.55■■■□□ 2.16
PCOLCE-208ENST00000487172 IDI1Q13907 227 aa28.55■■■□□ 2.16
PCOLCE-208ENST00000487172 FOXD1Q16676 465 aa28.55■■■□□ 2.16
PCOLCE-208ENST00000487172 PIK3C2BO00750 1634 aa28.54■■■□□ 2.16
PCOLCE-208ENST00000487172 TRPM2O94759 1503 aa28.54■■■□□ 2.16
PCOLCE-208ENST00000487172 UGGT1Q9NYU2 1555 aa28.49■■■□□ 2.15
PCOLCE-208ENST00000487172 KDM5AP29375 1690 aaKnown RBP28.48■■■□□ 2.15
PCOLCE-208ENST00000487172 ANKRD30BQ9BXX2 1392 aa28.47■■■□□ 2.15
PCOLCE-208ENST00000487172 THEMISQ8N1K5 641 aaPredicted RBP28.46■■■□□ 2.15
PCOLCE-208ENST00000487172 DHX57Q6P158 1386 aaKnown RBP28.46■■■□□ 2.15
PCOLCE-208ENST00000487172 UBR1Q8IWV7 1749 aa28.46■■■□□ 2.15
PCOLCE-208ENST00000487172 CLTCL1P53675 1640 aa28.44■■■□□ 2.14
PCOLCE-208ENST00000487172 ADGRB3O60242 1522 aa28.43■■■□□ 2.14
PCOLCE-208ENST00000487172 STAG3Q9UJ98 1225 aa28.42■■■□□ 2.14
PCOLCE-208ENST00000487172 CCDC144AA2RUR9 1427 aa28.42■■■□□ 2.14
PCOLCE-208ENST00000487172 TMEM131LA2VDJ0 1609 aa28.41■■■□□ 2.14
PCOLCE-208ENST00000487172 HSPA2P54652 639 aa28.4■■■□□ 2.14
PCOLCE-208ENST00000487172 KIF1BO60333 1816 aa28.38■■■□□ 2.13
PCOLCE-208ENST00000487172 CHGAP10645 457 aaKnown RBP28.35■■■□□ 2.13
PCOLCE-208ENST00000487172 ARHGAP23Q9P227 1491 aa28.34■■■□□ 2.13
PCOLCE-208ENST00000487172 SLIT1O75093 1534 aa28.34■■■□□ 2.13
PCOLCE-208ENST00000487172 MYO5BQ9ULV0 1848 aa28.34■■■□□ 2.13
PCOLCE-208ENST00000487172 TMEM2Q9UHN6 1383 aa28.33■■■□□ 2.13
PCOLCE-208ENST00000487172 NEURL4Q96JN8 1562 aa28.33■■■□□ 2.12
PCOLCE-208ENST00000487172 SPATA31E1Q6ZUB1 1445 aa28.29■■■□□ 2.12
PCOLCE-208ENST00000487172 ANKLE2Q86XL3 938 aa28.29■■■□□ 2.12
PCOLCE-208ENST00000487172 HDGFP51858 240 aaKnown RBP28.27■■■□□ 2.12
PCOLCE-208ENST00000487172 STRCQ7RTU9 1775 aa28.27■■■□□ 2.12
PCOLCE-208ENST00000487172 ZFYVE9O95405 1425 aa28.26■■■□□ 2.11
PCOLCE-208ENST00000487172 RPGRIP1LQ68CZ1 1315 aa28.25■■■□□ 2.11
PCOLCE-208ENST00000487172 EID1Q9Y6B2 187 aa28.25■■■□□ 2.11
PCOLCE-208ENST00000487172 RIMS2Q9UQ26 1411 aa28.25■■■□□ 2.11
PCOLCE-208ENST00000487172 LTKP29376 864 aa28.24■■■□□ 2.11
PCOLCE-208ENST00000487172 ZNF326Q5BKZ1 582 aaKnown RBP28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms