RNA–Protein interactions for RNA: ENST00000487084.1

CDHR3-212, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 834 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-212ENST00000487084 RRP7BPQ9NSQ0 103 aa34.51■■■■□ 3.12
CDHR3-212ENST00000487084 DUOX2Q9NRD8 1548 aa34.49■■■■□ 3.11
CDHR3-212ENST00000487084 WASHC2CQ9Y4E1 1318 aa34.46■■■■□ 3.11
CDHR3-212ENST00000487084 KDM5DQ9BY66 1539 aa34.45■■■■□ 3.11
CDHR3-212ENST00000487084 ANKRD30AQ9BXX3 1397 aa34.44■■■■□ 3.1
CDHR3-212ENST00000487084 NPATQ14207 1427 aa34.44■■■■□ 3.1
CDHR3-212ENST00000487084 EIF2AK4Q9P2K8 1649 aaKnown RBP34.44■■■■□ 3.1
CDHR3-212ENST00000487084 SETD1BQ9UPS6 1966 aaKnown RBP34.43■■■■□ 3.1
CDHR3-212ENST00000487084 RNF17Q9BXT8 1623 aaKnown RBP34.41■■■■□ 3.1
CDHR3-212ENST00000487084 FAM135AQ9P2D6 1515 aa34.4■■■■□ 3.1
CDHR3-212ENST00000487084 PTPRKQ15262 1439 aa34.39■■■■□ 3.1
CDHR3-212ENST00000487084 ERBINQ96RT1 1412 aa34.39■■■■□ 3.1
CDHR3-212ENST00000487084 NCOA1Q15788 1441 aa34.35■■■■□ 3.09
CDHR3-212ENST00000487084 ADGRL2O95490 1459 aa34.33■■■■□ 3.09
CDHR3-212ENST00000487084 MROH1Q8NDA8 1641 aa34.31■■■■□ 3.08
CDHR3-212ENST00000487084 ABCC3O15438 1527 aa34.3■■■■□ 3.08
CDHR3-212ENST00000487084 PZPP20742 1482 aa34.3■■■■□ 3.08
CDHR3-212ENST00000487084 FBXO31Q5XUX0 539 aaPredicted RBP34.29■■■■□ 3.08
CDHR3-212ENST00000487084 ITGAEP38570 1179 aa34.28■■■■□ 3.08
CDHR3-212ENST00000487084 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.28■■■■□ 3.08
CDHR3-212ENST00000487084 MYO3AQ8NEV4 1616 aa34.27■■■■□ 3.08
CDHR3-212ENST00000487084 ZC3H13Q5T200 1668 aaKnown RBP34.27■■■■□ 3.08
CDHR3-212ENST00000487084 PRDM15P57071 1507 aaPredicted RBP34.24■■■■□ 3.07
CDHR3-212ENST00000487084 TNRQ92752 1358 aa34.23■■■■□ 3.07
CDHR3-212ENST00000487084 CEP152O94986 1710 aa34.21■■■■□ 3.07
CDHR3-212ENST00000487084 KANK1Q14678 1352 aa34.21■■■■□ 3.07
CDHR3-212ENST00000487084 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.21■■■■□ 3.07
CDHR3-212ENST00000487084 CEP170BQ9Y4F5 1589 aaPredicted RBP34.19■■■■□ 3.06
CDHR3-212ENST00000487084 ANKRD50Q9ULJ7 1429 aa34.19■■■■□ 3.06
CDHR3-212ENST00000487084 DEPDC5O75140 1603 aa34.18■■■■□ 3.06
CDHR3-212ENST00000487084 ZNF142P52746 1687 aaPredicted RBP34.17■■■■□ 3.06
CDHR3-212ENST00000487084 CAMSAP1Q5T5Y3 1602 aa34.17■■■■□ 3.06
CDHR3-212ENST00000487084 RRBP1Q9P2E9 1410 aaKnown RBP34.15■■■■□ 3.06
CDHR3-212ENST00000487084 ROCK1Q13464 1354 aa34.14■■■■□ 3.06
CDHR3-212ENST00000487084 A2ML1A8K2U0 1454 aa34.14■■■■□ 3.06
CDHR3-212ENST00000487084 STRCQ7RTU9 1775 aa34.13■■■■□ 3.05
CDHR3-212ENST00000487084 DMRT2Q9Y5R5 561 aa34.11■■■■□ 3.05
CDHR3-212ENST00000487084 ERVK-7P63135 1459 aa34.1■■■■□ 3.05
CDHR3-212ENST00000487084 SPATA31D1Q6ZQQ2 1576 aa34.07■■■■□ 3.05
CDHR3-212ENST00000487084 NLRP1Q9C000 1473 aa34.06■■■■□ 3.04
CDHR3-212ENST00000487084 VWDEQ8N2E2 1590 aa34.05■■■■□ 3.04
CDHR3-212ENST00000487084 NCKAP5LQ9HCH0 1330 aa34.04■■■■□ 3.04
CDHR3-212ENST00000487084 ARHGAP31Q2M1Z3 1444 aa34.04■■■■□ 3.04
CDHR3-212ENST00000487084 LMTK2Q8IWU2 1503 aa34.03■■■■□ 3.04
CDHR3-212ENST00000487084 PLA2R1Q13018 1463 aa34.02■■■■□ 3.04
CDHR3-212ENST00000487084 CFAP65Q6ZU64 1925 aaKnown RBP34.01■■■■□ 3.04
CDHR3-212ENST00000487084 PTPRTO14522 1441 aa34■■■■□ 3.03
CDHR3-212ENST00000487084 UGGT1Q9NYU2 1555 aa33.98■■■■□ 3.03
CDHR3-212ENST00000487084 PKD2Q13563 968 aa33.96■■■■□ 3.03
CDHR3-212ENST00000487084 THEMISQ8N1K5 641 aaPredicted RBP33.95■■■■□ 3.03
CDHR3-212ENST00000487084 EFCAB6Q5THR3 1501 aa33.94■■■■□ 3.02
CDHR3-212ENST00000487084 UNC13BO14795 1591 aa33.94■■■■□ 3.02
CDHR3-212ENST00000487084 NUP155O75694 1391 aa33.86■■■■□ 3.01
CDHR3-212ENST00000487084 ILDR1Q86SU0 546 aaPredicted RBP33.86■■■■□ 3.01
CDHR3-212ENST00000487084 TET3O43151 1660 aa33.86■■■■□ 3.01
CDHR3-212ENST00000487084 ANKLE2Q86XL3 938 aa33.85■■■■□ 3.01
CDHR3-212ENST00000487084 RPRD2Q5VT52 1461 aaKnown RBP33.82■■■■□ 3.01
CDHR3-212ENST00000487084 STAG3Q9UJ98 1225 aa33.82■■■■□ 3
CDHR3-212ENST00000487084 POLR1AO95602 1720 aaPredicted RBP33.82■■■■□ 3
CDHR3-212ENST00000487084 NOS1P29475 1434 aa33.81■■■■□ 3
CDHR3-212ENST00000487084 NAIPQ13075 1403 aa33.81■■■■□ 3
CDHR3-212ENST00000487084 CERKQ8TCT0 537 aa33.81■■■■□ 3
CDHR3-212ENST00000487084 IQGAP3Q86VI3 1631 aa33.81■■■■□ 3
CDHR3-212ENST00000487084 SYNMO15061 1565 aa33.81■■■■□ 3
CDHR3-212ENST00000487084 GCC2Q8IWJ2 1684 aa33.8■■■■□ 3
CDHR3-212ENST00000487084 UBR1Q8IWV7 1749 aa33.79■■■■□ 3
CDHR3-212ENST00000487084 NEURL4Q96JN8 1562 aa33.78■■■■□ 3
CDHR3-212ENST00000487084 IDI1Q13907 227 aa33.78■■■■□ 3
CDHR3-212ENST00000487084 PIK3C2BO00750 1634 aa33.78■■■■□ 3
CDHR3-212ENST00000487084 HFM1A2PYH4 1435 aa33.75■■■□□ 2.99
CDHR3-212ENST00000487084 ZNF335Q9H4Z2 1342 aaPredicted RBP33.74■■■□□ 2.99
CDHR3-212ENST00000487084 FBXO41Q8TF61 875 aa33.73■■■□□ 2.99
CDHR3-212ENST00000487084 NPHP4O75161 1426 aaPredicted RBP33.72■■■□□ 2.99
CDHR3-212ENST00000487084 E9PCH4 1651 aa33.72■■■□□ 2.99
CDHR3-212ENST00000487084 SLC52A1Q9NWF4 448 aa33.71■■■□□ 2.99
CDHR3-212ENST00000487084 LTBP4Q8N2S1 1624 aa33.68■■■□□ 2.98
CDHR3-212ENST00000487084 MED14O60244 1454 aa33.68■■■□□ 2.98
CDHR3-212ENST00000487084 SCAF11Q99590 1463 aaKnown RBP33.67■■■□□ 2.98
CDHR3-212ENST00000487084 SLIT1O75093 1534 aa33.67■■■□□ 2.98
CDHR3-212ENST00000487084 ADGRB3O60242 1522 aa33.66■■■□□ 2.98
CDHR3-212ENST00000487084 TXNDC2Q86VQ3 553 aa33.66■■■□□ 2.98
CDHR3-212ENST00000487084 TRIM52Q96A61 297 aa33.66■■■□□ 2.98
CDHR3-212ENST00000487084 ARHGAP23Q9P227 1491 aa33.66■■■□□ 2.98
CDHR3-212ENST00000487084 EID1Q9Y6B2 187 aa33.66■■■□□ 2.98
CDHR3-212ENST00000487084 TMEM2Q9UHN6 1383 aa33.65■■■□□ 2.98
CDHR3-212ENST00000487084 LTKP29376 864 aa33.64■■■□□ 2.98
CDHR3-212ENST00000487084 IQGAP1P46940 1657 aa33.64■■■□□ 2.98
CDHR3-212ENST00000487084 KDM5AP29375 1690 aaKnown RBP33.62■■■□□ 2.97
CDHR3-212ENST00000487084 CHGAP10645 457 aaKnown RBP33.6■■■□□ 2.97
CDHR3-212ENST00000487084 TMEM131LA2VDJ0 1609 aa33.5■■■□□ 2.95
CDHR3-212ENST00000487084 SPHKAPQ2M3C7 1700 aa33.49■■■□□ 2.95
CDHR3-212ENST00000487084 SLC4A1APQ9BWU0 796 aaKnown RBP33.49■■■□□ 2.95
CDHR3-212ENST00000487084 IQSEC2Q5JU85 1478 aa33.48■■■□□ 2.95
CDHR3-212ENST00000487084 MYO5BQ9ULV0 1848 aa33.47■■■□□ 2.95
CDHR3-212ENST00000487084 RIMS2Q9UQ26 1411 aa33.46■■■□□ 2.95
CDHR3-212ENST00000487084 PPP1R15AO75807 674 aaPredicted RBP33.46■■■□□ 2.95
CDHR3-212ENST00000487084 CPS1P31327 1500 aa33.46■■■□□ 2.95
CDHR3-212ENST00000487084 BCANQ96GW7 911 aa33.45■■■□□ 2.95
CDHR3-212ENST00000487084 SENP3Q9H4L4 574 aaPredicted RBP33.45■■■□□ 2.95
CDHR3-212ENST00000487084 ZFYVE9O95405 1425 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms