RNA–Protein interactions for RNA: ENST00000486978.5

CTDSPL-208, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 609 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-208ENST00000486978 HNRNPMP52272 730 aaKnown RBP eCLIP10.54□□□□□ -0.72
CTDSPL-208ENST00000486978 MED14O60244 1454 aa10.54□□□□□ -0.72
CTDSPL-208ENST00000486978 IQGAP1P46940 1657 aa10.53□□□□□ -0.72
CTDSPL-208ENST00000486978 SYCP2Q9BX26 1530 aa10.53□□□□□ -0.72
CTDSPL-208ENST00000486978 DEPDC5O75140 1603 aa10.52□□□□□ -0.73
CTDSPL-208ENST00000486978 ANKLE2Q86XL3 938 aa10.52□□□□□ -0.73
CTDSPL-208ENST00000486978 A2MP01023 1474 aa10.52□□□□□ -0.73
CTDSPL-208ENST00000486978 ZC3H13Q5T200 1668 aaKnown RBP10.52□□□□□ -0.73
CTDSPL-208ENST00000486978 ATP7AQ04656 1500 aa10.52□□□□□ -0.73
CTDSPL-208ENST00000486978 SPAG9O60271 1321 aaKnown RBP10.52□□□□□ -0.73
CTDSPL-208ENST00000486978 INO80Q9ULG1 1556 aaPredicted RBP10.52□□□□□ -0.73
CTDSPL-208ENST00000486978 TNRQ92752 1358 aa10.51□□□□□ -0.73
CTDSPL-208ENST00000486978 ZNF777Q9ULD5 760 aaPredicted RBP10.5□□□□□ -0.73
CTDSPL-208ENST00000486978 CDK11AQ9UQ88 783 aaPredicted RBP10.5□□□□□ -0.73
CTDSPL-208ENST00000486978 SYNMO15061 1565 aa10.5□□□□□ -0.73
CTDSPL-208ENST00000486978 ARHGAP35Q9NRY4 1499 aa10.49□□□□□ -0.73
CTDSPL-208ENST00000486978 CLIP1P30622 1438 aa10.48□□□□□ -0.73
CTDSPL-208ENST00000486978 FMN1Q68DA7 1419 aa10.48□□□□□ -0.73
CTDSPL-208ENST00000486978 UGGT1Q9NYU2 1555 aa10.48□□□□□ -0.73
CTDSPL-208ENST00000486978 ROBO1Q9Y6N7 1651 aa10.47□□□□□ -0.73
CTDSPL-208ENST00000486978 FAM135BQ49AJ0 1406 aa10.47□□□□□ -0.73
CTDSPL-208ENST00000486978 THEMISQ8N1K5 641 aaPredicted RBP10.46□□□□□ -0.73
CTDSPL-208ENST00000486978 TRIM52Q96A61 297 aa10.46□□□□□ -0.73
CTDSPL-208ENST00000486978 ADGBQ8N7X0 1667 aa10.46□□□□□ -0.74
CTDSPL-208ENST00000486978 PZPP20742 1482 aa10.45□□□□□ -0.74
CTDSPL-208ENST00000486978 MIA2Q96PC5 1412 aa10.45□□□□□ -0.74
CTDSPL-208ENST00000486978 GPATCH8Q9UKJ3 1502 aaKnown RBP10.44□□□□□ -0.74
CTDSPL-208ENST00000486978 RBM33Q96EV2 1170 aaKnown RBP10.44□□□□□ -0.74
CTDSPL-208ENST00000486978 CFAP65Q6ZU64 1925 aaKnown RBP10.44□□□□□ -0.74
CTDSPL-208ENST00000486978 LRP6O75581 1613 aa10.44□□□□□ -0.74
CTDSPL-208ENST00000486978 MAPK8IP2Q13387 824 aaPredicted RBP10.43□□□□□ -0.74
CTDSPL-208ENST00000486978 PHLPP1O60346 1717 aa10.42□□□□□ -0.74
CTDSPL-208ENST00000486978 LTKP29376 864 aa10.42□□□□□ -0.74
CTDSPL-208ENST00000486978 POTEDQ86YR6 584 aa10.42□□□□□ -0.74
CTDSPL-208ENST00000486978 FAM135AQ9P2D6 1515 aa10.42□□□□□ -0.74
CTDSPL-208ENST00000486978 ZNF644Q9H582 1327 aaPredicted RBP10.41□□□□□ -0.74
CTDSPL-208ENST00000486978 PPP4R3CPQ6ZMV5 832 aa10.41□□□□□ -0.74
CTDSPL-208ENST00000486978 NLRP1Q9C000 1473 aa10.41□□□□□ -0.74
CTDSPL-208ENST00000486978 UBR1Q8IWV7 1749 aa10.41□□□□□ -0.74
CTDSPL-208ENST00000486978 DHX29Q7Z478 1369 aaKnown RBP10.39□□□□□ -0.75
CTDSPL-208ENST00000486978 MAP3K1Q13233 1512 aa10.39□□□□□ -0.75
CTDSPL-208ENST00000486978 KIF3BO15066 747 aa10.39□□□□□ -0.75
CTDSPL-208ENST00000486978 KIAA1107Q9UPP5 1409 aa10.39□□□□□ -0.75
CTDSPL-208ENST00000486978 EP400Q96L91 3159 aa10.38□□□□□ -0.75
CTDSPL-208ENST00000486978 KDM5DQ9BY66 1539 aa10.38□□□□□ -0.75
CTDSPL-208ENST00000486978 NCOA2Q15596 1464 aa10.38□□□□□ -0.75
CTDSPL-208ENST00000486978 CASKIN1Q8WXD9 1431 aa10.38□□□□□ -0.75
CTDSPL-208ENST00000486978 TMEM94Q12767 1356 aa10.38□□□□□ -0.75
CTDSPL-208ENST00000486978 MBD5Q9P267 1494 aa10.37□□□□□ -0.75
CTDSPL-208ENST00000486978 COL16A1Q07092 1604 aaPredicted RBP10.37□□□□□ -0.75
CTDSPL-208ENST00000486978 SETBP1Q9Y6X0 1596 aa10.37□□□□□ -0.75
CTDSPL-208ENST00000486978 CCDC18Q5T9S5 1454 aa10.36□□□□□ -0.75
CTDSPL-208ENST00000486978 WASHC2CQ9Y4E1 1318 aa10.36□□□□□ -0.75
CTDSPL-208ENST00000486978 FYCO1Q9BQS8 1478 aa10.36□□□□□ -0.75
CTDSPL-208ENST00000486978 JCADQ9P266 1359 aa10.35□□□□□ -0.75
CTDSPL-208ENST00000486978 SCAF11Q99590 1463 aaKnown RBP10.35□□□□□ -0.75
CTDSPL-208ENST00000486978 CFDP1Q9UEE9 299 aaPredicted RBP10.34□□□□□ -0.75
CTDSPL-208ENST00000486978 ARHGAP23Q9P227 1491 aa10.34□□□□□ -0.75
CTDSPL-208ENST00000486978 RXRBP28702 533 aa10.33□□□□□ -0.76
CTDSPL-208ENST00000486978 TXNDC2Q86VQ3 553 aa10.33□□□□□ -0.76
CTDSPL-208ENST00000486978 ERVK-7P63135 1459 aa10.32□□□□□ -0.76
CTDSPL-208ENST00000486978 PLEKHH2Q8IVE3 1493 aa10.32□□□□□ -0.76
CTDSPL-208ENST00000486978 ZNF772Q68DY9 489 aaPredicted RBP10.32□□□□□ -0.76
CTDSPL-208ENST00000486978 SLIT1O75093 1534 aa10.32□□□□□ -0.76
CTDSPL-208ENST00000486978 RTEL1-TNFRSF6BF6WH68 1400 aa10.32□□□□□ -0.76
CTDSPL-208ENST00000486978 CEP162Q5TB80 1403 aa10.32□□□□□ -0.76
CTDSPL-208ENST00000486978 CEP152O94986 1710 aa10.31□□□□□ -0.76
CTDSPL-208ENST00000486978 PROSER2Q86WR7 435 aaPredicted RBP10.31□□□□□ -0.76
CTDSPL-208ENST00000486978 SLAIN2Q9P270 581 aa10.31□□□□□ -0.76
CTDSPL-208ENST00000486978 RGS12O14924 1447 aa10.31□□□□□ -0.76
CTDSPL-208ENST00000486978 ABCC3O15438 1527 aa10.3□□□□□ -0.76
CTDSPL-208ENST00000486978 TET3O43151 1660 aa10.3□□□□□ -0.76
CTDSPL-208ENST00000486978 CDK12Q9NYV4 1490 aaPredicted RBP10.3□□□□□ -0.76
CTDSPL-208ENST00000486978 SHPRHQ149N8 1683 aa10.29□□□□□ -0.76
CTDSPL-208ENST00000486978 KCNA6P17658 529 aa10.29□□□□□ -0.76
CTDSPL-208ENST00000486978 MEX3CQ5U5Q3 659 aaKnown RBP10.29□□□□□ -0.76
CTDSPL-208ENST00000486978 SLC26A8Q96RN1 970 aa10.29□□□□□ -0.76
CTDSPL-208ENST00000486978 TIAM1Q13009 1591 aa10.29□□□□□ -0.76
CTDSPL-208ENST00000486978 PRDM15P57071 1507 aaPredicted RBP10.28□□□□□ -0.76
CTDSPL-208ENST00000486978 CCNB3Q8WWL7 1395 aa10.28□□□□□ -0.76
CTDSPL-208ENST00000486978 PIK3C2BO00750 1634 aa10.28□□□□□ -0.76
CTDSPL-208ENST00000486978 MROH1Q8NDA8 1641 aa10.28□□□□□ -0.76
CTDSPL-208ENST00000486978 LRRC9Q6ZRR7 1453 aa10.27□□□□□ -0.77
CTDSPL-208ENST00000486978 AFF2P51816 1311 aa10.27□□□□□ -0.77
CTDSPL-208ENST00000486978 SPATA31A6Q5VVP1 1343 aa10.27□□□□□ -0.77
CTDSPL-208ENST00000486978 DIP2AQ14689 1571 aa10.26□□□□□ -0.77
CTDSPL-208ENST00000486978 LOC105371045A0A1W2PR82 267 aa10.26□□□□□ -0.77
CTDSPL-208ENST00000486978 NUTM2BA6NNL0 878 aaPredicted RBP10.26□□□□□ -0.77
CTDSPL-208ENST00000486978 NUTM2EB1AL46 878 aaPredicted RBP10.26□□□□□ -0.77
CTDSPL-208ENST00000486978 NUTM2AQ8IVF1 878 aaPredicted RBP10.26□□□□□ -0.77
CTDSPL-208ENST00000486978 NWD1Q149M9 1564 aa10.26□□□□□ -0.77
CTDSPL-208ENST00000486978 KDM5AP29375 1690 aaKnown RBP10.25□□□□□ -0.77
CTDSPL-208ENST00000486978 NUTM2DQ5VT03 806 aaPredicted RBP10.25□□□□□ -0.77
CTDSPL-208ENST00000486978 FGD6Q6ZV73 1430 aa10.24□□□□□ -0.77
CTDSPL-208ENST00000486978 CHD2O14647 1828 aaKnown RBP10.24□□□□□ -0.77
CTDSPL-208ENST00000486978 QTRT2Q9H974 415 aaKnown RBP10.24□□□□□ -0.77
CTDSPL-208ENST00000486978 MTUS2Q5JR59 1369 aa10.24□□□□□ -0.77
CTDSPL-208ENST00000486978 MAST1Q9Y2H9 1570 aa10.23□□□□□ -0.77
CTDSPL-208ENST00000486978 AHDC1Q5TGY3 1603 aaPredicted RBP10.23□□□□□ -0.77
CTDSPL-208ENST00000486978 ZRANB1Q9UGI0 708 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms