RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 SETD1BQ9UPS6 1966 aaKnown RBP22.69■■□□□ 1.22
CLDN11-207ENST00000486975 DHX29Q7Z478 1369 aaKnown RBP22.69■■□□□ 1.22
CLDN11-207ENST00000486975 UHRF1BP1Q6BDS2 1440 aa22.68■■□□□ 1.22
CLDN11-207ENST00000486975 NPATQ14207 1427 aa22.66■■□□□ 1.22
CLDN11-207ENST00000486975 APLP2Q06481 763 aa22.66■■□□□ 1.22
CLDN11-207ENST00000486975 ZMYM3Q14202 1370 aa22.64■■□□□ 1.22
CLDN11-207ENST00000486975 MAST1Q9Y2H9 1570 aa22.63■■□□□ 1.21
CLDN11-207ENST00000486975 TSPY4P0CV99 314 aa22.63■■□□□ 1.21
CLDN11-207ENST00000486975 TSPY10P0CW01 314 aa22.63■■□□□ 1.21
CLDN11-207ENST00000486975 FAM135AQ9P2D6 1515 aa22.62■■□□□ 1.21
CLDN11-207ENST00000486975 GGT6Q6P531 493 aa22.61■■□□□ 1.21
CLDN11-207ENST00000486975 CLTCQ00610 1675 aaKnown RBP22.6■■□□□ 1.21
CLDN11-207ENST00000486975 ILDR1Q86SU0 546 aaPredicted RBP22.57■■□□□ 1.2
CLDN11-207ENST00000486975 PTPRKQ15262 1439 aa22.56■■□□□ 1.2
CLDN11-207ENST00000486975 KIF3BO15066 747 aa22.55■■□□□ 1.2
CLDN11-207ENST00000486975 SHANK2Q9UPX8 1470 aa22.54■■□□□ 1.2
CLDN11-207ENST00000486975 KDM5DQ9BY66 1539 aa22.53■■□□□ 1.2
CLDN11-207ENST00000486975 FGD6Q6ZV73 1430 aa22.53■■□□□ 1.2
CLDN11-207ENST00000486975 TCOF1Q13428 1488 aaKnown RBP22.53■■□□□ 1.2
CLDN11-207ENST00000486975 PTPN23Q9H3S7 1636 aa22.53■■□□□ 1.2
CLDN11-207ENST00000486975 STRCQ7RTU9 1775 aa22.51■■□□□ 1.19
CLDN11-207ENST00000486975 RNF17Q9BXT8 1623 aaKnown RBP22.49■■□□□ 1.19
CLDN11-207ENST00000486975 EIF2AK4Q9P2K8 1649 aaKnown RBP22.49■■□□□ 1.19
CLDN11-207ENST00000486975 ZNF142P52746 1687 aaPredicted RBP22.49■■□□□ 1.19
CLDN11-207ENST00000486975 ABCC5O15440 1437 aa22.48■■□□□ 1.19
CLDN11-207ENST00000486975 MYO3AQ8NEV4 1616 aa22.48■■□□□ 1.19
CLDN11-207ENST00000486975 NCOA1Q15788 1441 aa22.48■■□□□ 1.19
CLDN11-207ENST00000486975 DUOX2Q9NRD8 1548 aa22.47■■□□□ 1.19
CLDN11-207ENST00000486975 CROCC2H7BZ55 1655 aa22.47■■□□□ 1.19
CLDN11-207ENST00000486975 PTPRTO14522 1441 aa22.47■■□□□ 1.19
CLDN11-207ENST00000486975 PZPP20742 1482 aa22.47■■□□□ 1.19
CLDN11-207ENST00000486975 DNMT1P26358 1616 aaKnown RBP22.46■■□□□ 1.19
CLDN11-207ENST00000486975 FBXO41Q8TF61 875 aa22.45■■□□□ 1.18
CLDN11-207ENST00000486975 WASHC2CQ9Y4E1 1318 aa22.45■■□□□ 1.18
CLDN11-207ENST00000486975 DAPK1P53355 1430 aa22.45■■□□□ 1.18
CLDN11-207ENST00000486975 CEP170BQ9Y4F5 1589 aaPredicted RBP22.45■■□□□ 1.18
CLDN11-207ENST00000486975 CAMSAP1Q5T5Y3 1602 aa22.42■■□□□ 1.18
CLDN11-207ENST00000486975 PLA2R1Q13018 1463 aa22.42■■□□□ 1.18
CLDN11-207ENST00000486975 KIF15Q9NS87 1388 aa22.42■■□□□ 1.18
CLDN11-207ENST00000486975 ZC3H13Q5T200 1668 aaKnown RBP22.42■■□□□ 1.18
CLDN11-207ENST00000486975 ERBINQ96RT1 1412 aa22.41■■□□□ 1.18
CLDN11-207ENST00000486975 MROH1Q8NDA8 1641 aa22.41■■□□□ 1.18
CLDN11-207ENST00000486975 ABCC3O15438 1527 aa22.41■■□□□ 1.18
CLDN11-207ENST00000486975 A2ML1A8K2U0 1454 aa22.41■■□□□ 1.18
CLDN11-207ENST00000486975 TNRQ92752 1358 aa22.39■■□□□ 1.18
CLDN11-207ENST00000486975 U3KPZ7 1027 aaPredicted RBP22.38■■□□□ 1.17
CLDN11-207ENST00000486975 FBXO31Q5XUX0 539 aaPredicted RBP22.37■■□□□ 1.17
CLDN11-207ENST00000486975 PRDM15P57071 1507 aaPredicted RBP22.36■■□□□ 1.17
CLDN11-207ENST00000486975 CERKQ8TCT0 537 aa22.36■■□□□ 1.17
CLDN11-207ENST00000486975 ANKRD30AQ9BXX3 1397 aa22.36■■□□□ 1.17
CLDN11-207ENST00000486975 NLRP1Q9C000 1473 aa22.34■■□□□ 1.17
CLDN11-207ENST00000486975 PKD2Q13563 968 aa22.34■■□□□ 1.17
CLDN11-207ENST00000486975 RRP7BPQ9NSQ0 103 aa22.34■■□□□ 1.17
CLDN11-207ENST00000486975 ADGRL2O95490 1459 aa22.34■■□□□ 1.17
CLDN11-207ENST00000486975 SPATA31D1Q6ZQQ2 1576 aa22.32■■□□□ 1.16
CLDN11-207ENST00000486975 DEPDC5O75140 1603 aa22.31■■□□□ 1.16
CLDN11-207ENST00000486975 ARHGAP31Q2M1Z3 1444 aa22.3■■□□□ 1.16
CLDN11-207ENST00000486975 NCKAP5LQ9HCH0 1330 aa22.29■■□□□ 1.16
CLDN11-207ENST00000486975 ERVK-7P63135 1459 aa22.28■■□□□ 1.16
CLDN11-207ENST00000486975 LTBP4Q8N2S1 1624 aa22.28■■□□□ 1.16
CLDN11-207ENST00000486975 CEP152O94986 1710 aa22.27■■□□□ 1.16
CLDN11-207ENST00000486975 FAM50AQ14320 339 aaKnown RBP22.27■■□□□ 1.16
CLDN11-207ENST00000486975 CHIC2Q9UKJ5 165 aa22.27■■□□□ 1.16
CLDN11-207ENST00000486975 SLC4A2P04920 1241 aa22.25■■□□□ 1.15
CLDN11-207ENST00000486975 LMTK2Q8IWU2 1503 aa22.25■■□□□ 1.15
CLDN11-207ENST00000486975 VWDEQ8N2E2 1590 aa22.25■■□□□ 1.15
CLDN11-207ENST00000486975 UGGT1Q9NYU2 1555 aa22.25■■□□□ 1.15
CLDN11-207ENST00000486975 KANK1Q14678 1352 aa22.25■■□□□ 1.15
CLDN11-207ENST00000486975 THEMISQ8N1K5 641 aaPredicted RBP22.24■■□□□ 1.15
CLDN11-207ENST00000486975 IQSEC2Q5JU85 1478 aa22.22■■□□□ 1.15
CLDN11-207ENST00000486975 NEURL4Q96JN8 1562 aa22.21■■□□□ 1.15
CLDN11-207ENST00000486975 POLR1AO95602 1720 aaPredicted RBP22.2■■□□□ 1.14
CLDN11-207ENST00000486975 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.2■■□□□ 1.14
CLDN11-207ENST00000486975 ANKRD50Q9ULJ7 1429 aa22.19■■□□□ 1.14
CLDN11-207ENST00000486975 MED14O60244 1454 aa22.17■■□□□ 1.14
CLDN11-207ENST00000486975 ROCK1Q13464 1354 aa22.17■■□□□ 1.14
CLDN11-207ENST00000486975 ANKLE2Q86XL3 938 aa22.17■■□□□ 1.14
CLDN11-207ENST00000486975 ZNF335Q9H4Z2 1342 aaPredicted RBP22.15■■□□□ 1.14
CLDN11-207ENST00000486975 EFCAB6Q5THR3 1501 aa22.15■■□□□ 1.14
CLDN11-207ENST00000486975 UBR1Q8IWV7 1749 aa22.12■■□□□ 1.13
CLDN11-207ENST00000486975 NPHP4O75161 1426 aaPredicted RBP22.11■■□□□ 1.13
CLDN11-207ENST00000486975 NOS1P29475 1434 aa22.1■■□□□ 1.13
CLDN11-207ENST00000486975 RPRD2Q5VT52 1461 aaKnown RBP22.09■■□□□ 1.13
CLDN11-207ENST00000486975 ARHGAP23Q9P227 1491 aa22.09■■□□□ 1.13
CLDN11-207ENST00000486975 UNC13BO14795 1591 aa22.09■■□□□ 1.13
CLDN11-207ENST00000486975 SLIT1O75093 1534 aa22.09■■□□□ 1.13
CLDN11-207ENST00000486975 CFAP65Q6ZU64 1925 aaKnown RBP22.08■■□□□ 1.13
CLDN11-207ENST00000486975 KDM5AP29375 1690 aaKnown RBP22.07■■□□□ 1.12
CLDN11-207ENST00000486975 CPS1P31327 1500 aa22.06■■□□□ 1.12
CLDN11-207ENST00000486975 SYNMO15061 1565 aa22.06■■□□□ 1.12
CLDN11-207ENST00000486975 PIK3C2BO00750 1634 aa22.06■■□□□ 1.12
CLDN11-207ENST00000486975 RRBP1Q9P2E9 1410 aaKnown RBP22.06■■□□□ 1.12
CLDN11-207ENST00000486975 TET3O43151 1660 aa22.05■■□□□ 1.12
CLDN11-207ENST00000486975 IQGAP1P46940 1657 aa22.05■■□□□ 1.12
CLDN11-207ENST00000486975 SCAF11Q99590 1463 aaKnown RBP22.05■■□□□ 1.12
CLDN11-207ENST00000486975 PPARGC1BQ86YN6 1023 aaKnown RBP22.05■■□□□ 1.12
CLDN11-207ENST00000486975 IDI1Q13907 227 aa22.02■■□□□ 1.12
CLDN11-207ENST00000486975 SPINK5Q9NQ38 1064 aaPredicted RBP22.02■■□□□ 1.12
CLDN11-207ENST00000486975 SLC52A1Q9NWF4 448 aa22.02■■□□□ 1.12
CLDN11-207ENST00000486975 TMEM2Q9UHN6 1383 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms