RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 CNTLNQ9NXG0 1405 aa17.62■□□□□ 0.41
LINC00996-202ENST00000486954 FAM135AQ9P2D6 1515 aa17.62■□□□□ 0.41
LINC00996-202ENST00000486954 GCC2Q8IWJ2 1684 aa17.6■□□□□ 0.41
LINC00996-202ENST00000486954 PPP6R1Q9UPN7 881 aa17.59■□□□□ 0.41
LINC00996-202ENST00000486954 KDM5DQ9BY66 1539 aa17.58■□□□□ 0.41
LINC00996-202ENST00000486954 ZC3H13Q5T200 1668 aaKnown RBP17.58■□□□□ 0.4
LINC00996-202ENST00000486954 PRDM15P57071 1507 aaPredicted RBP17.57■□□□□ 0.4
LINC00996-202ENST00000486954 CLTCQ00610 1675 aaKnown RBP17.57■□□□□ 0.4
LINC00996-202ENST00000486954 DEPDC5O75140 1603 aa17.57■□□□□ 0.4
LINC00996-202ENST00000486954 PTPRMP28827 1452 aa17.56■□□□□ 0.4
LINC00996-202ENST00000486954 HFM1A2PYH4 1435 aa17.56■□□□□ 0.4
LINC00996-202ENST00000486954 KANK1Q14678 1352 aa17.56■□□□□ 0.4
LINC00996-202ENST00000486954 MROH2AA6NES4 1674 aa17.56■□□□□ 0.4
LINC00996-202ENST00000486954 AEBP2Q6ZN18 517 aaPredicted RBP17.56■□□□□ 0.4
LINC00996-202ENST00000486954 MROH1Q8NDA8 1641 aa17.54■□□□□ 0.4
LINC00996-202ENST00000486954 NAIPQ13075 1403 aa17.54■□□□□ 0.4
LINC00996-202ENST00000486954 WASHC2CQ9Y4E1 1318 aa17.53■□□□□ 0.4
LINC00996-202ENST00000486954 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.52■□□□□ 0.4
LINC00996-202ENST00000486954 UNC13BO14795 1591 aa17.52■□□□□ 0.39
LINC00996-202ENST00000486954 CEP152O94986 1710 aa17.51■□□□□ 0.39
LINC00996-202ENST00000486954 PLPPR3Q6T4P5 718 aa17.51■□□□□ 0.39
LINC00996-202ENST00000486954 ABCC3O15438 1527 aa17.51■□□□□ 0.39
LINC00996-202ENST00000486954 C3P01024 1663 aa17.5■□□□□ 0.39
LINC00996-202ENST00000486954 CAMSAP1Q5T5Y3 1602 aa17.48■□□□□ 0.39
LINC00996-202ENST00000486954 ZMYM3Q14202 1370 aa17.48■□□□□ 0.39
LINC00996-202ENST00000486954 VWDEQ8N2E2 1590 aa17.47■□□□□ 0.39
LINC00996-202ENST00000486954 LMTK2Q8IWU2 1503 aa17.46■□□□□ 0.39
LINC00996-202ENST00000486954 IQGAP3Q86VI3 1631 aa17.45■□□□□ 0.38
LINC00996-202ENST00000486954 PZPP20742 1482 aa17.44■□□□□ 0.38
LINC00996-202ENST00000486954 NUP155O75694 1391 aa17.44■□□□□ 0.38
LINC00996-202ENST00000486954 CEBPAP49715 358 aaPredicted RBP17.44■□□□□ 0.38
LINC00996-202ENST00000486954 SETD5Q9C0A6 1442 aa17.44■□□□□ 0.38
LINC00996-202ENST00000486954 ACIN1Q9UKV3 1341 aaKnown RBP17.44■□□□□ 0.38
LINC00996-202ENST00000486954 TET3O43151 1660 aa17.43■□□□□ 0.38
LINC00996-202ENST00000486954 NPATQ14207 1427 aa17.43■□□□□ 0.38
LINC00996-202ENST00000486954 EFCAB6Q5THR3 1501 aa17.42■□□□□ 0.38
LINC00996-202ENST00000486954 TRIM26Q12899 539 aaPredicted RBP17.42■□□□□ 0.38
LINC00996-202ENST00000486954 ARHGAP31Q2M1Z3 1444 aa17.41■□□□□ 0.38
LINC00996-202ENST00000486954 TRIM52Q96A61 297 aa17.41■□□□□ 0.38
LINC00996-202ENST00000486954 PREX1Q8TCU6 1659 aa17.4■□□□□ 0.38
LINC00996-202ENST00000486954 RAB3GAP2Q9H2M9 1393 aa17.38■□□□□ 0.37
LINC00996-202ENST00000486954 UHRF1BP1Q6BDS2 1440 aa17.38■□□□□ 0.37
LINC00996-202ENST00000486954 ERVK-7P63135 1459 aa17.37■□□□□ 0.37
LINC00996-202ENST00000486954 RPRD2Q5VT52 1461 aaKnown RBP17.37■□□□□ 0.37
LINC00996-202ENST00000486954 SETD1BQ9UPS6 1966 aaKnown RBP17.37■□□□□ 0.37
LINC00996-202ENST00000486954 TNRQ92752 1358 aa17.37■□□□□ 0.37
LINC00996-202ENST00000486954 SPATA31D1Q6ZQQ2 1576 aa17.36■□□□□ 0.37
LINC00996-202ENST00000486954 MYO3AQ8NEV4 1616 aa17.36■□□□□ 0.37
LINC00996-202ENST00000486954 CFAP65Q6ZU64 1925 aaKnown RBP17.33■□□□□ 0.37
LINC00996-202ENST00000486954 E9PCH4 1651 aa17.33■□□□□ 0.37
LINC00996-202ENST00000486954 FBXO31Q5XUX0 539 aaPredicted RBP17.33■□□□□ 0.36
LINC00996-202ENST00000486954 SLC4A1APQ9BWU0 796 aaKnown RBP17.32■□□□□ 0.36
LINC00996-202ENST00000486954 ZNF142P52746 1687 aaPredicted RBP17.32■□□□□ 0.36
LINC00996-202ENST00000486954 NLRP1Q9C000 1473 aa17.31■□□□□ 0.36
LINC00996-202ENST00000486954 CEP170BQ9Y4F5 1589 aaPredicted RBP17.31■□□□□ 0.36
LINC00996-202ENST00000486954 LMTK3Q96Q04 1460 aa17.31■□□□□ 0.36
LINC00996-202ENST00000486954 HRCP23327 699 aa17.29■□□□□ 0.36
LINC00996-202ENST00000486954 NOS1P29475 1434 aa17.29■□□□□ 0.36
LINC00996-202ENST00000486954 A2ML1A8K2U0 1454 aa17.28■□□□□ 0.36
LINC00996-202ENST00000486954 SPHKAPQ2M3C7 1700 aa17.27■□□□□ 0.36
LINC00996-202ENST00000486954 SYNMO15061 1565 aa17.27■□□□□ 0.35
LINC00996-202ENST00000486954 PKD2Q13563 968 aa17.26■□□□□ 0.35
LINC00996-202ENST00000486954 MPHOSPH9Q99550 1183 aa17.25■□□□□ 0.35
LINC00996-202ENST00000486954 UGGT1Q9NYU2 1555 aa17.24■□□□□ 0.35
LINC00996-202ENST00000486954 SLC52A1Q9NWF4 448 aa17.23■□□□□ 0.35
LINC00996-202ENST00000486954 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
LINC00996-202ENST00000486954 TRPM2O94759 1503 aa17.22■□□□□ 0.35
LINC00996-202ENST00000486954 PIK3C2BO00750 1634 aa17.21■□□□□ 0.35
LINC00996-202ENST00000486954 ADGRB3O60242 1522 aa17.21■□□□□ 0.34
LINC00996-202ENST00000486954 PTPRTO14522 1441 aa17.21■□□□□ 0.34
LINC00996-202ENST00000486954 HSPA2P54652 639 aa17.2■□□□□ 0.34
LINC00996-202ENST00000486954 UBR1Q8IWV7 1749 aa17.2■□□□□ 0.34
LINC00996-202ENST00000486954 KDM5AP29375 1690 aaKnown RBP17.2■□□□□ 0.34
LINC00996-202ENST00000486954 PLA2R1Q13018 1463 aa17.18■□□□□ 0.34
LINC00996-202ENST00000486954 IDI1Q13907 227 aa17.18■□□□□ 0.34
LINC00996-202ENST00000486954 THEMISQ8N1K5 641 aaPredicted RBP17.18■□□□□ 0.34
LINC00996-202ENST00000486954 PCGF6Q9BYE7 350 aa17.18■□□□□ 0.34
LINC00996-202ENST00000486954 CCDC144AA2RUR9 1427 aa17.16■□□□□ 0.34
LINC00996-202ENST00000486954 CHGAP10645 457 aaKnown RBP17.16■□□□□ 0.34
LINC00996-202ENST00000486954 FOXD1Q16676 465 aa17.16■□□□□ 0.34
LINC00996-202ENST00000486954 CLTCL1P53675 1640 aa17.16■□□□□ 0.34
LINC00996-202ENST00000486954 KIF1BO60333 1816 aa17.14■□□□□ 0.34
LINC00996-202ENST00000486954 POLR1AO95602 1720 aaPredicted RBP17.13■□□□□ 0.33
LINC00996-202ENST00000486954 TMEM131LA2VDJ0 1609 aa17.13■□□□□ 0.33
LINC00996-202ENST00000486954 MYO5BQ9ULV0 1848 aa17.11■□□□□ 0.33
LINC00996-202ENST00000486954 SLIT1O75093 1534 aa17.11■□□□□ 0.33
LINC00996-202ENST00000486954 ANKLE2Q86XL3 938 aa17.1■□□□□ 0.33
LINC00996-202ENST00000486954 EID1Q9Y6B2 187 aa17.1■□□□□ 0.33
LINC00996-202ENST00000486954 TMEM2Q9UHN6 1383 aa17.1■□□□□ 0.33
LINC00996-202ENST00000486954 ARHGAP23Q9P227 1491 aa17.1■□□□□ 0.33
LINC00996-202ENST00000486954 STRCQ7RTU9 1775 aa17.08■□□□□ 0.33
LINC00996-202ENST00000486954 SCAF11Q99590 1463 aaKnown RBP17.08■□□□□ 0.32
LINC00996-202ENST00000486954 HDGFP51858 240 aaKnown RBP17.08■□□□□ 0.32
LINC00996-202ENST00000486954 ZNF326Q5BKZ1 582 aaKnown RBP17.08■□□□□ 0.32
LINC00996-202ENST00000486954 DMRT2Q9Y5R5 561 aa17.08■□□□□ 0.32
LINC00996-202ENST00000486954 ANKRD30BQ9BXX2 1392 aa17.07■□□□□ 0.32
LINC00996-202ENST00000486954 RIMS2Q9UQ26 1411 aa17.06■□□□□ 0.32
LINC00996-202ENST00000486954 DHX57Q6P158 1386 aaKnown RBP17.06■□□□□ 0.32
LINC00996-202ENST00000486954 NCKAP5LQ9HCH0 1330 aa17.06■□□□□ 0.32
LINC00996-202ENST00000486954 PPP1R15AO75807 674 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms