RNA–Protein interactions for RNA: ENST00000486851.5

ELL3-205, Transcript of elongation factor for RNA polymerase II 3, humanhuman

TSL 2

Gene ELL3, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3-205ENST00000486851 ZNF644Q9H582 1327 aaPredicted RBP17.23■□□□□ 0.35
ELL3-205ENST00000486851 GGT6Q6P531 493 aa17.23■□□□□ 0.35
ELL3-205ENST00000486851 CFDP1Q9UEE9 299 aaPredicted RBP17.23■□□□□ 0.35
ELL3-205ENST00000486851 HSPA1LP34931 641 aa17.22■□□□□ 0.35
ELL3-205ENST00000486851 DHX29Q7Z478 1369 aaKnown RBP17.22■□□□□ 0.35
ELL3-205ENST00000486851 CCNB3Q8WWL7 1395 aa17.22■□□□□ 0.35
ELL3-205ENST00000486851 MED14O60244 1454 aa17.22■□□□□ 0.35
ELL3-205ENST00000486851 DEPDC5O75140 1603 aa17.21■□□□□ 0.35
ELL3-205ENST00000486851 KDM5DQ9BY66 1539 aa17.21■□□□□ 0.34
ELL3-205ENST00000486851 STRCP1A6NGW2 1772 aa17.2■□□□□ 0.34
ELL3-205ENST00000486851 TNRQ92752 1358 aa17.19■□□□□ 0.34
ELL3-205ENST00000486851 FBXO31Q5XUX0 539 aaPredicted RBP17.19■□□□□ 0.34
ELL3-205ENST00000486851 CEP162Q5TB80 1403 aa17.19■□□□□ 0.34
ELL3-205ENST00000486851 EHBP1L1Q8N3D4 1523 aa17.18■□□□□ 0.34
ELL3-205ENST00000486851 NLRP1Q9C000 1473 aa17.15■□□□□ 0.34
ELL3-205ENST00000486851 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
ELL3-205ENST00000486851 MIA2Q96PC5 1412 aa17.14■□□□□ 0.33
ELL3-205ENST00000486851 CCDC141Q6ZP82 1450 aa17.14■□□□□ 0.33
ELL3-205ENST00000486851 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.14■□□□□ 0.33
ELL3-205ENST00000486851 RNF17Q9BXT8 1623 aaKnown RBP17.13■□□□□ 0.33
ELL3-205ENST00000486851 IQGAP1P46940 1657 aa17.13■□□□□ 0.33
ELL3-205ENST00000486851 ZC3H13Q5T200 1668 aaKnown RBP17.13■□□□□ 0.33
ELL3-205ENST00000486851 UGGT1Q9NYU2 1555 aa17.12■□□□□ 0.33
ELL3-205ENST00000486851 NPHP4O75161 1426 aaPredicted RBP17.12■□□□□ 0.33
ELL3-205ENST00000486851 CAMSAP2Q08AD1 1489 aa17.12■□□□□ 0.33
ELL3-205ENST00000486851 LRRC7Q96NW7 1537 aa17.11■□□□□ 0.33
ELL3-205ENST00000486851 ARHGEF5Q12774 1597 aa17.11■□□□□ 0.33
ELL3-205ENST00000486851 MROH1Q8NDA8 1641 aa17.11■□□□□ 0.33
ELL3-205ENST00000486851 TOM1O60784 492 aa17.1■□□□□ 0.33
ELL3-205ENST00000486851 PIP4K2BP78356 416 aa17.09■□□□□ 0.33
ELL3-205ENST00000486851 ABCC3O15438 1527 aa17.09■□□□□ 0.33
ELL3-205ENST00000486851 SYNMO15061 1565 aa17.09■□□□□ 0.33
ELL3-205ENST00000486851 KIF3BO15066 747 aa17.08■□□□□ 0.32
ELL3-205ENST00000486851 NCOA2Q15596 1464 aa17.07■□□□□ 0.32
ELL3-205ENST00000486851 ANKLE2Q86XL3 938 aa17.07■□□□□ 0.32
ELL3-205ENST00000486851 XIRP1Q702N8 1843 aaKnown RBP17.07■□□□□ 0.32
ELL3-205ENST00000486851 MAST1Q9Y2H9 1570 aa17.06■□□□□ 0.32
ELL3-205ENST00000486851 ERVK-7P63135 1459 aa17.05■□□□□ 0.32
ELL3-205ENST00000486851 UBR1Q8IWV7 1749 aa17.04■□□□□ 0.32
ELL3-205ENST00000486851 THEMISQ8N1K5 641 aaPredicted RBP17.04■□□□□ 0.32
ELL3-205ENST00000486851 WASHC2CQ9Y4E1 1318 aa17.03■□□□□ 0.32
ELL3-205ENST00000486851 ARHGAP23Q9P227 1491 aa17.03■□□□□ 0.32
ELL3-205ENST00000486851 EIF2AK4Q9P2K8 1649 aaKnown RBP17.03■□□□□ 0.32
ELL3-205ENST00000486851 RGS17Q9UGC6 210 aaPredicted RBP17.02■□□□□ 0.32
ELL3-205ENST00000486851 SCAF1Q9H7N4 1312 aaKnown RBP17.01■□□□□ 0.31
ELL3-205ENST00000486851 RSPH4AQ5TD94 716 aa17.01■□□□□ 0.31
ELL3-205ENST00000486851 SLIT1O75093 1534 aa17.01■□□□□ 0.31
ELL3-205ENST00000486851 CEP152O94986 1710 aa16.99■□□□□ 0.31
ELL3-205ENST00000486851 SCAF11Q99590 1463 aaKnown RBP16.97■□□□□ 0.31
ELL3-205ENST00000486851 PRDM15P57071 1507 aaPredicted RBP16.95■□□□□ 0.3
ELL3-205ENST00000486851 LTKP29376 864 aa16.94■□□□□ 0.3
ELL3-205ENST00000486851 ARHGAP31Q2M1Z3 1444 aa16.94■□□□□ 0.3
ELL3-205ENST00000486851 CFAP65Q6ZU64 1925 aaKnown RBP16.92■□□□□ 0.3
ELL3-205ENST00000486851 LRRC9Q6ZRR7 1453 aa16.92■□□□□ 0.3
ELL3-205ENST00000486851 MAP3K1Q13233 1512 aa16.91■□□□□ 0.3
ELL3-205ENST00000486851 FAM135BQ49AJ0 1406 aa16.9■□□□□ 0.3
ELL3-205ENST00000486851 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
ELL3-205ENST00000486851 PIK3C2BO00750 1634 aa16.89■□□□□ 0.29
ELL3-205ENST00000486851 KDM5AP29375 1690 aaKnown RBP16.89■□□□□ 0.29
ELL3-205ENST00000486851 TET3O43151 1660 aa16.88■□□□□ 0.29
ELL3-205ENST00000486851 DUOX2Q9NRD8 1548 aa16.88■□□□□ 0.29
ELL3-205ENST00000486851 TSPY4P0CV99 314 aa16.86■□□□□ 0.29
ELL3-205ENST00000486851 TSPY10P0CW01 314 aa16.86■□□□□ 0.29
ELL3-205ENST00000486851 CROCC2H7BZ55 1655 aa16.85■□□□□ 0.29
ELL3-205ENST00000486851 NWD1Q149M9 1564 aa16.85■□□□□ 0.29
ELL3-205ENST00000486851 POTEAQ6S8J7 498 aa16.84■□□□□ 0.29
ELL3-205ENST00000486851 TMEM2Q9UHN6 1383 aa16.84■□□□□ 0.29
ELL3-205ENST00000486851 ROBO1Q9Y6N7 1651 aa16.84■□□□□ 0.29
ELL3-205ENST00000486851 MYOM3Q5VTT5 1437 aa16.83■□□□□ 0.28
ELL3-205ENST00000486851 LMTK2Q8IWU2 1503 aa16.83■□□□□ 0.28
ELL3-205ENST00000486851 ERBINQ96RT1 1412 aa16.83■□□□□ 0.28
ELL3-205ENST00000486851 VPS8Q8N3P4 1428 aa16.82■□□□□ 0.28
ELL3-205ENST00000486851 TXNDC2Q86VQ3 553 aa16.82■□□□□ 0.28
ELL3-205ENST00000486851 TMEM94Q12767 1356 aa16.81■□□□□ 0.28
ELL3-205ENST00000486851 KANK4Q5T7N3 995 aaPredicted RBP16.81■□□□□ 0.28
ELL3-205ENST00000486851 SENP3Q9H4L4 574 aaPredicted RBP16.81■□□□□ 0.28
ELL3-205ENST00000486851 ABCC5O15440 1437 aa16.8■□□□□ 0.28
ELL3-205ENST00000486851 EFCAB6Q5THR3 1501 aa16.8■□□□□ 0.28
ELL3-205ENST00000486851 KIF15Q9NS87 1388 aa16.79■□□□□ 0.28
ELL3-205ENST00000486851 NOS1P29475 1434 aa16.79■□□□□ 0.28
ELL3-205ENST00000486851 NKTRP30414 1462 aaKnown RBP16.78■□□□□ 0.28
ELL3-205ENST00000486851 SETD1AO15047 1707 aaKnown RBP16.77■□□□□ 0.28
ELL3-205ENST00000486851 ADGRB3O60242 1522 aa16.75■□□□□ 0.27
ELL3-205ENST00000486851 KCNA6P17658 529 aa16.75■□□□□ 0.27
ELL3-205ENST00000486851 IDI1Q13907 227 aa16.74■□□□□ 0.27
ELL3-205ENST00000486851 COL16A1Q07092 1604 aaPredicted RBP16.74■□□□□ 0.27
ELL3-205ENST00000486851 ZFYVE9O95405 1425 aa16.73■□□□□ 0.27
ELL3-205ENST00000486851 DAPK1P53355 1430 aa16.72■□□□□ 0.27
ELL3-205ENST00000486851 PTPN23Q9H3S7 1636 aa16.72■□□□□ 0.27
ELL3-205ENST00000486851 CHD2O14647 1828 aaKnown RBP16.72■□□□□ 0.27
ELL3-205ENST00000486851 EID1Q9Y6B2 187 aa16.71■□□□□ 0.27
ELL3-205ENST00000486851 PHLPP1O60346 1717 aa16.7■□□□□ 0.26
ELL3-205ENST00000486851 LRP6O75581 1613 aa16.7■□□□□ 0.26
ELL3-205ENST00000486851 MYO5BQ9ULV0 1848 aa16.69■□□□□ 0.26
ELL3-205ENST00000486851 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
ELL3-205ENST00000486851 SLC26A8Q96RN1 970 aa16.69■□□□□ 0.26
ELL3-205ENST00000486851 RRP7BPQ9NSQ0 103 aa16.68■□□□□ 0.26
ELL3-205ENST00000486851 ADGRL2O95490 1459 aa16.66■□□□□ 0.26
ELL3-205ENST00000486851 JCADQ9P266 1359 aa16.65■□□□□ 0.26
ELL3-205ENST00000486851 FGD6Q6ZV73 1430 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms