RNA–Protein interactions for RNA: ENST00000486806.1

MCF2L-227, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-227ENST00000486806 MROH1Q8NDA8 1641 aa14.33□□□□□ -0.11
MCF2L-227ENST00000486806 KDM5DQ9BY66 1539 aa14.33□□□□□ -0.12
MCF2L-227ENST00000486806 HRCP23327 699 aa14.33□□□□□ -0.12
MCF2L-227ENST00000486806 VWDEQ8N2E2 1590 aa14.3□□□□□ -0.12
MCF2L-227ENST00000486806 KIF3BO15066 747 aa14.28□□□□□ -0.12
MCF2L-227ENST00000486806 ACIN1Q9UKV3 1341 aaKnown RBP14.28□□□□□ -0.12
MCF2L-227ENST00000486806 IQGAP3Q86VI3 1631 aa14.27□□□□□ -0.12
MCF2L-227ENST00000486806 FAM135AQ9P2D6 1515 aa14.27□□□□□ -0.12
MCF2L-227ENST00000486806 PZPP20742 1482 aa14.27□□□□□ -0.12
MCF2L-227ENST00000486806 LMTK2Q8IWU2 1503 aa14.25□□□□□ -0.13
MCF2L-227ENST00000486806 ABCC3O15438 1527 aa14.25□□□□□ -0.13
MCF2L-227ENST00000486806 NUP155O75694 1391 aa14.24□□□□□ -0.13
MCF2L-227ENST00000486806 ZC3H13Q5T200 1668 aaKnown RBP14.23□□□□□ -0.13
MCF2L-227ENST00000486806 DHX57Q6P158 1386 aaKnown RBP14.22□□□□□ -0.13
MCF2L-227ENST00000486806 KANK1Q14678 1352 aa14.22□□□□□ -0.13
MCF2L-227ENST00000486806 EFCAB6Q5THR3 1501 aa14.21□□□□□ -0.13
MCF2L-227ENST00000486806 GGT6Q6P531 493 aa14.21□□□□□ -0.13
MCF2L-227ENST00000486806 ARID4BQ4LE39 1312 aaPredicted RBP14.2□□□□□ -0.14
MCF2L-227ENST00000486806 TRIM52Q96A61 297 aa14.2□□□□□ -0.14
MCF2L-227ENST00000486806 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.2□□□□□ -0.143e-6■■■□□ 16.3
MCF2L-227ENST00000486806 PPP6R1Q9UPN7 881 aa14.2□□□□□ -0.14
MCF2L-227ENST00000486806 TET3O43151 1660 aa14.2□□□□□ -0.14
MCF2L-227ENST00000486806 CEP152O94986 1710 aa14.18□□□□□ -0.14
MCF2L-227ENST00000486806 CAMSAP1Q5T5Y3 1602 aa14.18□□□□□ -0.14
MCF2L-227ENST00000486806 ARHGAP31Q2M1Z3 1444 aa14.17□□□□□ -0.14
MCF2L-227ENST00000486806 CNTLNQ9NXG0 1405 aa14.17□□□□□ -0.14
MCF2L-227ENST00000486806 MPHOSPH9Q99550 1183 aa14.17□□□□□ -0.14
MCF2L-227ENST00000486806 ADAMTSL3P82987 1691 aa14.17□□□□□ -0.14
MCF2L-227ENST00000486806 WASHC2CQ9Y4E1 1318 aa14.16□□□□□ -0.14
MCF2L-227ENST00000486806 NPATQ14207 1427 aa14.16□□□□□ -0.14
MCF2L-227ENST00000486806 MLECQ14165 292 aa14.16□□□□□ -0.14
MCF2L-227ENST00000486806 SLC4A1APQ9BWU0 796 aaKnown RBP14.16□□□□□ -0.14
MCF2L-227ENST00000486806 RPRD2Q5VT52 1461 aaKnown RBP14.16□□□□□ -0.14
MCF2L-227ENST00000486806 E9PCH4 1651 aa14.15□□□□□ -0.14
MCF2L-227ENST00000486806 CLTCQ00610 1675 aaKnown RBP14.15□□□□□ -0.14
MCF2L-227ENST00000486806 MADDQ8WXG6 1647 aa14.15□□□□□ -0.14
MCF2L-227ENST00000486806 MROH2AA6NES4 1674 aa14.14□□□□□ -0.15
MCF2L-227ENST00000486806 FER1L4A9Z1Z3 1794 aa14.14□□□□□ -0.15
MCF2L-227ENST00000486806 PKD2Q13563 968 aa14.13□□□□□ -0.15
MCF2L-227ENST00000486806 PTPRTO14522 1441 aa14.12□□□□□ -0.15
MCF2L-227ENST00000486806 PLA2R1Q13018 1463 aa14.11□□□□□ -0.15
MCF2L-227ENST00000486806 TRPM2O94759 1503 aa14.1□□□□□ -0.15
MCF2L-227ENST00000486806 ZMYM3Q14202 1370 aa14.1□□□□□ -0.15
MCF2L-227ENST00000486806 ANKRD30BQ9BXX2 1392 aa14.1□□□□□ -0.15
MCF2L-227ENST00000486806 NOS1P29475 1434 aa14.1□□□□□ -0.15
MCF2L-227ENST00000486806 SPATA31D1Q6ZQQ2 1576 aa14.09□□□□□ -0.15
MCF2L-227ENST00000486806 FOXD1Q16676 465 aa14.09□□□□□ -0.15
MCF2L-227ENST00000486806 ERVK-7P63135 1459 aa14.09□□□□□ -0.15
MCF2L-227ENST00000486806 CLSPNQ9HAW4 1339 aa14.09□□□□□ -0.15
MCF2L-227ENST00000486806 RIMS1Q86UR5 1692 aaKnown RBP14.08□□□□□ -0.16
MCF2L-227ENST00000486806 ESF1Q9H501 851 aaKnown RBP14.08□□□□□ -0.16
MCF2L-227ENST00000486806 PREX1Q8TCU6 1659 aa14.07□□□□□ -0.16
MCF2L-227ENST00000486806 SPHKAPQ2M3C7 1700 aa14.07□□□□□ -0.16
MCF2L-227ENST00000486806 SYNMO15061 1565 aa14.07□□□□□ -0.16
MCF2L-227ENST00000486806 C3P01024 1663 aa14.07□□□□□ -0.16
MCF2L-227ENST00000486806 CCER1Q8TC90 406 aaPredicted RBP14.05□□□□□ -0.16
MCF2L-227ENST00000486806 PTPRMP28827 1452 aa14.05□□□□□ -0.16
MCF2L-227ENST00000486806 PIK3C2BO00750 1634 aa14.04□□□□□ -0.16
MCF2L-227ENST00000486806 KDM4FA0A1W2PPD8 638 aa14.03□□□□□ -0.16
MCF2L-227ENST00000486806 UGGT1Q9NYU2 1555 aa14.03□□□□□ -0.16
MCF2L-227ENST00000486806 CLTCL1P53675 1640 aa14.03□□□□□ -0.16
MCF2L-227ENST00000486806 CCDC144AA2RUR9 1427 aa14.02□□□□□ -0.16
MCF2L-227ENST00000486806 FBXO31Q5XUX0 539 aaPredicted RBP14.02□□□□□ -0.17
MCF2L-227ENST00000486806 TNRQ92752 1358 aa14□□□□□ -0.17
MCF2L-227ENST00000486806 CEBPAP49715 358 aaPredicted RBP14□□□□□ -0.17
MCF2L-227ENST00000486806 NEURL4Q96JN8 1562 aa14□□□□□ -0.17
MCF2L-227ENST00000486806 ADGRB3O60242 1522 aa13.99□□□□□ -0.17
MCF2L-227ENST00000486806 NLRP1Q9C000 1473 aa13.98□□□□□ -0.17
MCF2L-227ENST00000486806 SPATA31E1Q6ZUB1 1445 aa13.98□□□□□ -0.17
MCF2L-227ENST00000486806 MYO3AQ8NEV4 1616 aa13.97□□□□□ -0.17
MCF2L-227ENST00000486806 SIN3AQ96ST3 1273 aa13.97□□□□□ -0.17
MCF2L-227ENST00000486806 SLC52A1Q9NWF4 448 aa13.97□□□□□ -0.17
MCF2L-227ENST00000486806 IDI1Q13907 227 aa13.94□□□□□ -0.18
MCF2L-227ENST00000486806 KDM5AP29375 1690 aaKnown RBP13.94□□□□□ -0.18
MCF2L-227ENST00000486806 ZNF142P52746 1687 aaPredicted RBP13.94□□□□□ -0.18
MCF2L-227ENST00000486806 TMEM131LA2VDJ0 1609 aa13.93□□□□□ -0.18
MCF2L-227ENST00000486806 A2ML1A8K2U0 1454 aa13.93□□□□□ -0.18
MCF2L-227ENST00000486806 CEP170BQ9Y4F5 1589 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-227ENST00000486806 NEUROD1Q13562 356 aa13.91□□□□□ -0.18
MCF2L-227ENST00000486806 PLPPR3Q6T4P5 718 aa13.91□□□□□ -0.18
MCF2L-227ENST00000486806 UBR1Q8IWV7 1749 aa13.9□□□□□ -0.18
MCF2L-227ENST00000486806 CFAP65Q6ZU64 1925 aaKnown RBP13.9□□□□□ -0.18
MCF2L-227ENST00000486806 KIF1BO60333 1816 aa13.9□□□□□ -0.18
MCF2L-227ENST00000486806 UHRF1BP1Q6BDS2 1440 aa13.9□□□□□ -0.19
MCF2L-227ENST00000486806 TONSLQ96HA7 1378 aa13.88□□□□□ -0.19
MCF2L-227ENST00000486806 TIMELESSQ9UNS1 1208 aa13.88□□□□□ -0.19
MCF2L-227ENST00000486806 NEXMIFQ5QGS0 1516 aa13.88□□□□□ -0.19
MCF2L-227ENST00000486806 ZFYVE9O95405 1425 aa13.87□□□□□ -0.19
MCF2L-227ENST00000486806 IFT172Q9UG01 1749 aa13.87□□□□□ -0.19
MCF2L-227ENST00000486806 MYOM2P54296 1465 aa13.87□□□□□ -0.19
MCF2L-227ENST00000486806 ARHGAP23Q9P227 1491 aa13.87□□□□□ -0.19
MCF2L-227ENST00000486806 SLIT1O75093 1534 aa13.86□□□□□ -0.19
MCF2L-227ENST00000486806 L3MBTL2Q969R5 705 aa13.86□□□□□ -0.19
MCF2L-227ENST00000486806 LMTK3Q96Q04 1460 aa13.85□□□□□ -0.19
MCF2L-227ENST00000486806 NRXN1Q9ULB1 1477 aa13.85□□□□□ -0.19
MCF2L-227ENST00000486806 RPGRIP1LQ68CZ1 1315 aa13.85□□□□□ -0.19
MCF2L-227ENST00000486806 TMEM2Q9UHN6 1383 aa13.84□□□□□ -0.19
MCF2L-227ENST00000486806 CHGAP10645 457 aaKnown RBP13.84□□□□□ -0.19
MCF2L-227ENST00000486806 RGL3Q3MIN7 710 aa13.84□□□□□ -0.19
MCF2L-227ENST00000486806 MYO5BQ9ULV0 1848 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms