RNA–Protein interactions for RNA: ENST00000486766.2

ATG9A-221, Transcript of autophagy related 9A, humanhuman

TSL 4

Gene ATG9A, Length 579 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-221ENST00000486766 DEPDC5O75140 1603 aa28.72■■■□□ 2.19
ATG9A-221ENST00000486766 HFM1A2PYH4 1435 aa28.7■■■□□ 2.19
ATG9A-221ENST00000486766 NAIPQ13075 1403 aa28.7■■■□□ 2.19
ATG9A-221ENST00000486766 KDM4FA0A1W2PPD8 638 aa28.7■■■□□ 2.18
ATG9A-221ENST00000486766 CLTCQ00610 1675 aaKnown RBP28.7■■■□□ 2.18
ATG9A-221ENST00000486766 MROH1Q8NDA8 1641 aa28.69■■■□□ 2.18
ATG9A-221ENST00000486766 ESF1Q9H501 851 aaKnown RBP28.68■■■□□ 2.18
ATG9A-221ENST00000486766 PRDM15P57071 1507 aaPredicted RBP28.67■■■□□ 2.18
ATG9A-221ENST00000486766 ZC3H13Q5T200 1668 aaKnown RBP28.66■■■□□ 2.18
ATG9A-221ENST00000486766 CEP152O94986 1710 aa28.66■■■□□ 2.18
ATG9A-221ENST00000486766 KDM5DQ9BY66 1539 aa28.64■■■□□ 2.18
ATG9A-221ENST00000486766 FAM135AQ9P2D6 1515 aa28.64■■■□□ 2.18
ATG9A-221ENST00000486766 UNC13BO14795 1591 aa28.64■■■□□ 2.18
ATG9A-221ENST00000486766 MROH2AA6NES4 1674 aa28.64■■■□□ 2.17
ATG9A-221ENST00000486766 TRIM26Q12899 539 aaPredicted RBP28.62■■■□□ 2.17
ATG9A-221ENST00000486766 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.62■■■□□ 2.17
ATG9A-221ENST00000486766 PPP6R1Q9UPN7 881 aa28.62■■■□□ 2.17
ATG9A-221ENST00000486766 CNTLNQ9NXG0 1405 aa28.61■■■□□ 2.17
ATG9A-221ENST00000486766 KANK1Q14678 1352 aa28.6■■■□□ 2.17
ATG9A-221ENST00000486766 C3P01024 1663 aa28.58■■■□□ 2.17
ATG9A-221ENST00000486766 WASHC2CQ9Y4E1 1318 aa28.58■■■□□ 2.17
ATG9A-221ENST00000486766 PTPRMP28827 1452 aa28.58■■■□□ 2.17
ATG9A-221ENST00000486766 ABCC3O15438 1527 aa28.58■■■□□ 2.17
ATG9A-221ENST00000486766 CAMSAP1Q5T5Y3 1602 aa28.56■■■□□ 2.16
ATG9A-221ENST00000486766 VWDEQ8N2E2 1590 aa28.55■■■□□ 2.16
ATG9A-221ENST00000486766 SETD5Q9C0A6 1442 aa28.55■■■□□ 2.16
ATG9A-221ENST00000486766 IQGAP3Q86VI3 1631 aa28.53■■■□□ 2.16
ATG9A-221ENST00000486766 PLPPR3Q6T4P5 718 aa28.52■■■□□ 2.16
ATG9A-221ENST00000486766 NUP155O75694 1391 aa28.49■■■□□ 2.15
ATG9A-221ENST00000486766 ZMYM3Q14202 1370 aa28.49■■■□□ 2.15
ATG9A-221ENST00000486766 TET3O43151 1660 aa28.48■■■□□ 2.15
ATG9A-221ENST00000486766 LMTK2Q8IWU2 1503 aa28.48■■■□□ 2.15
ATG9A-221ENST00000486766 RAB3GAP2Q9H2M9 1393 aa28.47■■■□□ 2.15
ATG9A-221ENST00000486766 CFAP65Q6ZU64 1925 aaKnown RBP28.45■■■□□ 2.15
ATG9A-221ENST00000486766 CEBPAP49715 358 aaPredicted RBP28.45■■■□□ 2.14
ATG9A-221ENST00000486766 TRIM52Q96A61 297 aa28.45■■■□□ 2.14
ATG9A-221ENST00000486766 EFCAB6Q5THR3 1501 aa28.44■■■□□ 2.14
ATG9A-221ENST00000486766 PZPP20742 1482 aa28.42■■■□□ 2.14
ATG9A-221ENST00000486766 PREX1Q8TCU6 1659 aa28.39■■■□□ 2.14
ATG9A-221ENST00000486766 E9PCH4 1651 aa28.38■■■□□ 2.13
ATG9A-221ENST00000486766 ACIN1Q9UKV3 1341 aaKnown RBP28.38■■■□□ 2.13
ATG9A-221ENST00000486766 ARHGAP31Q2M1Z3 1444 aa28.37■■■□□ 2.13
ATG9A-221ENST00000486766 NPATQ14207 1427 aa28.35■■■□□ 2.13
ATG9A-221ENST00000486766 SETD1BQ9UPS6 1966 aaKnown RBP28.34■■■□□ 2.13
ATG9A-221ENST00000486766 RPRD2Q5VT52 1461 aaKnown RBP28.33■■■□□ 2.13
ATG9A-221ENST00000486766 ERVK-7P63135 1459 aa28.32■■■□□ 2.12
ATG9A-221ENST00000486766 SPATA31D1Q6ZQQ2 1576 aa28.32■■■□□ 2.12
ATG9A-221ENST00000486766 FBXO31Q5XUX0 539 aaPredicted RBP28.31■■■□□ 2.12
ATG9A-221ENST00000486766 MYO3AQ8NEV4 1616 aa28.29■■■□□ 2.12
ATG9A-221ENST00000486766 HRCP23327 699 aa28.29■■■□□ 2.12
ATG9A-221ENST00000486766 SLC4A1APQ9BWU0 796 aaKnown RBP28.29■■■□□ 2.12
ATG9A-221ENST00000486766 PCGF6Q9BYE7 350 aa28.29■■■□□ 2.12
ATG9A-221ENST00000486766 SPHKAPQ2M3C7 1700 aa28.27■■■□□ 2.12
ATG9A-221ENST00000486766 TNRQ92752 1358 aa28.26■■■□□ 2.12
ATG9A-221ENST00000486766 MPHOSPH9Q99550 1183 aa28.23■■■□□ 2.11
ATG9A-221ENST00000486766 UHRF1BP1Q6BDS2 1440 aa28.23■■■□□ 2.11
ATG9A-221ENST00000486766 SYNMO15061 1565 aa28.23■■■□□ 2.11
ATG9A-221ENST00000486766 ZNF142P52746 1687 aaPredicted RBP28.23■■■□□ 2.11
ATG9A-221ENST00000486766 PKD2Q13563 968 aa28.22■■■□□ 2.11
ATG9A-221ENST00000486766 NOS1P29475 1434 aa28.2■■■□□ 2.11
ATG9A-221ENST00000486766 CEP170BQ9Y4F5 1589 aaPredicted RBP28.19■■■□□ 2.1
ATG9A-221ENST00000486766 NLRP1Q9C000 1473 aa28.17■■■□□ 2.1
ATG9A-221ENST00000486766 LMTK3Q96Q04 1460 aa28.15■■■□□ 2.1
ATG9A-221ENST00000486766 A2ML1A8K2U0 1454 aa28.14■■■□□ 2.09
ATG9A-221ENST00000486766 PIK3C2BO00750 1634 aa28.14■■■□□ 2.09
ATG9A-221ENST00000486766 TRPM2O94759 1503 aa28.13■■■□□ 2.09
ATG9A-221ENST00000486766 FOXD1Q16676 465 aa28.13■■■□□ 2.09
ATG9A-221ENST00000486766 UGGT1Q9NYU2 1555 aa28.11■■■□□ 2.09
ATG9A-221ENST00000486766 PTPRTO14522 1441 aa28.11■■■□□ 2.09
ATG9A-221ENST00000486766 UBR1Q8IWV7 1749 aa28.1■■■□□ 2.09
ATG9A-221ENST00000486766 CLTCL1P53675 1640 aa28.08■■■□□ 2.09
ATG9A-221ENST00000486766 SLC52A1Q9NWF4 448 aa28.08■■■□□ 2.09
ATG9A-221ENST00000486766 KDM5AP29375 1690 aaKnown RBP28.07■■■□□ 2.08
ATG9A-221ENST00000486766 MYO5BQ9ULV0 1848 aa28.07■■■□□ 2.08
ATG9A-221ENST00000486766 KIF1BO60333 1816 aa28.06■■■□□ 2.08
ATG9A-221ENST00000486766 ADGRB3O60242 1522 aa28.05■■■□□ 2.08
ATG9A-221ENST00000486766 PLA2R1Q13018 1463 aa28.05■■■□□ 2.08
ATG9A-221ENST00000486766 IDI1Q13907 227 aa28.05■■■□□ 2.08
ATG9A-221ENST00000486766 STAG3Q9UJ98 1225 aa28.03■■■□□ 2.08
ATG9A-221ENST00000486766 HSPA2P54652 639 aa28.01■■■□□ 2.07
ATG9A-221ENST00000486766 TMEM131LA2VDJ0 1609 aa28■■■□□ 2.07
ATG9A-221ENST00000486766 CCDC144AA2RUR9 1427 aa27.99■■■□□ 2.07
ATG9A-221ENST00000486766 CHGAP10645 457 aaKnown RBP27.98■■■□□ 2.07
ATG9A-221ENST00000486766 THEMISQ8N1K5 641 aaPredicted RBP27.97■■■□□ 2.07
ATG9A-221ENST00000486766 DHX57Q6P158 1386 aaKnown RBP27.97■■■□□ 2.07
ATG9A-221ENST00000486766 POLR1AO95602 1720 aaPredicted RBP27.95■■■□□ 2.07
ATG9A-221ENST00000486766 ANKRD30BQ9BXX2 1392 aa27.95■■■□□ 2.06
ATG9A-221ENST00000486766 STRCQ7RTU9 1775 aa27.91■■■□□ 2.06
ATG9A-221ENST00000486766 ILDR1Q86SU0 546 aaPredicted RBP27.9■■■□□ 2.06
ATG9A-221ENST00000486766 SLIT1O75093 1534 aa27.89■■■□□ 2.06
ATG9A-221ENST00000486766 TMEM2Q9UHN6 1383 aa27.86■■■□□ 2.05
ATG9A-221ENST00000486766 ARHGAP23Q9P227 1491 aa27.86■■■□□ 2.05
ATG9A-221ENST00000486766 ZNF326Q5BKZ1 582 aaKnown RBP27.85■■■□□ 2.05
ATG9A-221ENST00000486766 NEURL4Q96JN8 1562 aa27.82■■■□□ 2.04
ATG9A-221ENST00000486766 ANKLE2Q86XL3 938 aa27.82■■■□□ 2.04
ATG9A-221ENST00000486766 RIMS2Q9UQ26 1411 aa27.82■■■□□ 2.04
ATG9A-221ENST00000486766 SCAF11Q99590 1463 aaKnown RBP27.82■■■□□ 2.04
ATG9A-221ENST00000486766 EID1Q9Y6B2 187 aa27.81■■■□□ 2.04
ATG9A-221ENST00000486766 NCKAP5LQ9HCH0 1330 aa27.81■■■□□ 2.04
ATG9A-221ENST00000486766 ZFYVE9O95405 1425 aa27.8■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms