RNA–Protein interactions for RNA: ENST00000486724.5

APTX-228, Transcript of aprataxin, humanhuman

TSL 4

Gene APTX, Length 556 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-228ENST00000486724 FAM135AQ9P2D6 1515 aa14.11□□□□□ -0.15
APTX-228ENST00000486724 THEMISQ8N1K5 641 aaPredicted RBP14.11□□□□□ -0.15
APTX-228ENST00000486724 UGGT1Q9NYU2 1555 aa14.11□□□□□ -0.15
APTX-228ENST00000486724 INO80Q9ULG1 1556 aaPredicted RBP14.1□□□□□ -0.15
APTX-228ENST00000486724 FMN1Q68DA7 1419 aa14.09□□□□□ -0.15
APTX-228ENST00000486724 NLRP1Q9C000 1473 aa14.09□□□□□ -0.15
APTX-228ENST00000486724 SYCP2Q9BX26 1530 aa14.09□□□□□ -0.15
APTX-228ENST00000486724 PZPP20742 1482 aa14.08□□□□□ -0.16
APTX-228ENST00000486724 XIRP1Q702N8 1843 aaKnown RBP14.08□□□□□ -0.16
APTX-228ENST00000486724 ROBO1Q9Y6N7 1651 aa14.07□□□□□ -0.16
APTX-228ENST00000486724 CDC42BPAQ5VT25 1732 aa14.07□□□□□ -0.16
APTX-228ENST00000486724 CSRNP3Q8WYN3 585 aa14.07□□□□□ -0.16
APTX-228ENST00000486724 ADGBQ8N7X0 1667 aa14.07□□□□□ -0.16
APTX-228ENST00000486724 TRIM52Q96A61 297 aa14.06□□□□□ -0.16
APTX-228ENST00000486724 ZC3H13Q5T200 1668 aaKnown RBP14.06□□□□□ -0.16
APTX-228ENST00000486724 FBXO31Q5XUX0 539 aaPredicted RBP14.05□□□□□ -0.16
APTX-228ENST00000486724 KDM5DQ9BY66 1539 aa14.04□□□□□ -0.16
APTX-228ENST00000486724 LRRIQ1Q96JM4 1722 aa14.03□□□□□ -0.16
APTX-228ENST00000486724 MIA2Q96PC5 1412 aa14.02□□□□□ -0.16
APTX-228ENST00000486724 JCADQ9P266 1359 aa14.02□□□□□ -0.17
APTX-228ENST00000486724 ZNF772Q68DY9 489 aaPredicted RBP14.02□□□□□ -0.17
APTX-228ENST00000486724 LRRC9Q6ZRR7 1453 aa14.01□□□□□ -0.17
APTX-228ENST00000486724 CDK12Q9NYV4 1490 aaPredicted RBP14.01□□□□□ -0.17
APTX-228ENST00000486724 ZNF777Q9ULD5 760 aaPredicted RBP14□□□□□ -0.17
APTX-228ENST00000486724 PHLPP1O60346 1717 aa14□□□□□ -0.17
APTX-228ENST00000486724 HNRNPMP52272 730 aaKnown RBP eCLIP13.99□□□□□ -0.17
APTX-228ENST00000486724 PLEKHH2Q8IVE3 1493 aa13.99□□□□□ -0.17
APTX-228ENST00000486724 KIAA1107Q9UPP5 1409 aa13.98□□□□□ -0.17
APTX-228ENST00000486724 LRP6O75581 1613 aa13.97□□□□□ -0.17
APTX-228ENST00000486724 SCAF11Q99590 1463 aaKnown RBP13.96□□□□□ -0.17
APTX-228ENST00000486724 RXRBP28702 533 aa13.96□□□□□ -0.17
APTX-228ENST00000486724 MEX3CQ5U5Q3 659 aaKnown RBP13.96□□□□□ -0.17
APTX-228ENST00000486724 TMEM94Q12767 1356 aa13.95□□□□□ -0.18
APTX-228ENST00000486724 SPATA31A6Q5VVP1 1343 aa13.94□□□□□ -0.18
APTX-228ENST00000486724 CCDC18Q5T9S5 1454 aa13.94□□□□□ -0.18
APTX-228ENST00000486724 FOXD1Q16676 465 aa13.94□□□□□ -0.18
APTX-228ENST00000486724 MAP3K1Q13233 1512 aa13.94□□□□□ -0.18
APTX-228ENST00000486724 COL16A1Q07092 1604 aaPredicted RBP13.93□□□□□ -0.18
APTX-228ENST00000486724 ARHGAP35Q9NRY4 1499 aa13.93□□□□□ -0.18
APTX-228ENST00000486724 WASHC2CQ9Y4E1 1318 aa13.92□□□□□ -0.18
APTX-228ENST00000486724 EEA1Q15075 1411 aa13.92□□□□□ -0.18
APTX-228ENST00000486724 GPATCH8Q9UKJ3 1502 aaKnown RBP13.92□□□□□ -0.18
APTX-228ENST00000486724 DHX29Q7Z478 1369 aaKnown RBP13.92□□□□□ -0.18
APTX-228ENST00000486724 FGD6Q6ZV73 1430 aa13.91□□□□□ -0.18
APTX-228ENST00000486724 UBR1Q8IWV7 1749 aa13.91□□□□□ -0.18
APTX-228ENST00000486724 ZRANB1Q9UGI0 708 aa13.91□□□□□ -0.18
APTX-228ENST00000486724 SETBP1Q9Y6X0 1596 aa13.9□□□□□ -0.18
APTX-228ENST00000486724 KIF3BO15066 747 aa13.89□□□□□ -0.19
APTX-228ENST00000486724 SHPRHQ149N8 1683 aa13.88□□□□□ -0.19
APTX-228ENST00000486724 SLIT1O75093 1534 aa13.88□□□□□ -0.19
APTX-228ENST00000486724 RTEL1-TNFRSF6BF6WH68 1400 aa13.88□□□□□ -0.19
APTX-228ENST00000486724 RGS12O14924 1447 aa13.88□□□□□ -0.19
APTX-228ENST00000486724 TIAM1Q13009 1591 aa13.88□□□□□ -0.19
APTX-228ENST00000486724 ARHGAP23Q9P227 1491 aa13.87□□□□□ -0.19
APTX-228ENST00000486724 CFDP1Q9UEE9 299 aaPredicted RBP13.86□□□□□ -0.19
APTX-228ENST00000486724 PRDM15P57071 1507 aaPredicted RBP13.85□□□□□ -0.19
APTX-228ENST00000486724 MSH6P52701 1360 aa13.85□□□□□ -0.19
APTX-228ENST00000486724 LTKP29376 864 aa13.85□□□□□ -0.19
APTX-228ENST00000486724 TXNDC2Q86VQ3 553 aa13.85□□□□□ -0.19
APTX-228ENST00000486724 SLAIN2Q9P270 581 aa13.85□□□□□ -0.19
APTX-228ENST00000486724 ERVK-7P63135 1459 aa13.85□□□□□ -0.19
APTX-228ENST00000486724 PROSER2Q86WR7 435 aaPredicted RBP13.84□□□□□ -0.19
APTX-228ENST00000486724 NKTRP30414 1462 aaKnown RBP13.84□□□□□ -0.19
APTX-228ENST00000486724 NCOA2Q15596 1464 aa13.84□□□□□ -0.19
APTX-228ENST00000486724 ABCC3O15438 1527 aa13.84□□□□□ -0.19
APTX-228ENST00000486724 CASKIN1Q8WXD9 1431 aa13.83□□□□□ -0.2
APTX-228ENST00000486724 EP400Q96L91 3159 aa13.83□□□□□ -0.2
APTX-228ENST00000486724 NUTM2BA6NNL0 878 aaPredicted RBP13.83□□□□□ -0.2
APTX-228ENST00000486724 NUTM2EB1AL46 878 aaPredicted RBP13.83□□□□□ -0.2
APTX-228ENST00000486724 NUTM2DQ5VT03 806 aaPredicted RBP13.83□□□□□ -0.2
APTX-228ENST00000486724 NUTM2AQ8IVF1 878 aaPredicted RBP13.83□□□□□ -0.2
APTX-228ENST00000486724 ATAD2Q6PL18 1390 aa13.83□□□□□ -0.2
APTX-228ENST00000486724 KCNA6P17658 529 aa13.82□□□□□ -0.2
APTX-228ENST00000486724 EID1Q9Y6B2 187 aa13.82□□□□□ -0.2
APTX-228ENST00000486724 MBD5Q9P267 1494 aa13.81□□□□□ -0.2
APTX-228ENST00000486724 NWD1Q149M9 1564 aa13.81□□□□□ -0.2
APTX-228ENST00000486724 RBM33Q96EV2 1170 aaKnown RBP13.81□□□□□ -0.2
APTX-228ENST00000486724 AHDC1Q5TGY3 1603 aaPredicted RBP13.81□□□□□ -0.2
APTX-228ENST00000486724 AFF2P51816 1311 aa13.81□□□□□ -0.2
APTX-228ENST00000486724 CCNB3Q8WWL7 1395 aa13.81□□□□□ -0.2
APTX-228ENST00000486724 KDM5AP29375 1690 aaKnown RBP13.79□□□□□ -0.2
APTX-228ENST00000486724 RBM6P78332 1123 aaKnown RBP13.79□□□□□ -0.2
APTX-228ENST00000486724 LRP5O75197 1615 aa13.77□□□□□ -0.21
APTX-228ENST00000486724 CAMSAP2Q08AD1 1489 aa13.77□□□□□ -0.21
APTX-228ENST00000486724 DIP2AQ14689 1571 aa13.75□□□□□ -0.21
APTX-228ENST00000486724 FYCO1Q9BQS8 1478 aa13.75□□□□□ -0.21
APTX-228ENST00000486724 TMEM2Q9UHN6 1383 aa13.75□□□□□ -0.21
APTX-228ENST00000486724 ZNF644Q9H582 1327 aaPredicted RBP13.75□□□□□ -0.21
APTX-228ENST00000486724 UBTFP17480 764 aaKnown RBP13.75□□□□□ -0.21
APTX-228ENST00000486724 CCDC141Q6ZP82 1450 aa13.74□□□□□ -0.21
APTX-228ENST00000486724 QTRT2Q9H974 415 aaKnown RBP13.74□□□□□ -0.21
APTX-228ENST00000486724 TET3O43151 1660 aa13.74□□□□□ -0.21
APTX-228ENST00000486724 NGLY1Q96IV0 654 aa13.73□□□□□ -0.21
APTX-228ENST00000486724 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
APTX-228ENST00000486724 SLC26A8Q96RN1 970 aa13.72□□□□□ -0.21
APTX-228ENST00000486724 CEP152O94986 1710 aa13.71□□□□□ -0.21
APTX-228ENST00000486724 CFAP65Q6ZU64 1925 aaKnown RBP13.7□□□□□ -0.22
APTX-228ENST00000486724 CCDC125Q86Z20 511 aa13.7□□□□□ -0.22
APTX-228ENST00000486724 C8orf37Q96NL8 207 aa13.7□□□□□ -0.22
APTX-228ENST00000486724 EFCAB6Q5THR3 1501 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms