RNA–Protein interactions for RNA: ENST00000486704.1

HDAC8-218, Transcript of histone deacetylase 8, humanhuman

TSL 2

Gene HDAC8, Length 330 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-218ENST00000486704 UHRF1BP1Q6BDS2 1440 aa24.77■■□□□ 1.56
HDAC8-218ENST00000486704 ZMYM3Q14202 1370 aa24.76■■□□□ 1.55
HDAC8-218ENST00000486704 MROH1Q8NDA8 1641 aa24.75■■□□□ 1.55
HDAC8-218ENST00000486704 KIF3BO15066 747 aa24.74■■□□□ 1.55
HDAC8-218ENST00000486704 ZNF142P52746 1687 aaPredicted RBP24.73■■□□□ 1.55
HDAC8-218ENST00000486704 MYO3AQ8NEV4 1616 aa24.72■■□□□ 1.55
HDAC8-218ENST00000486704 ERBINQ96RT1 1412 aa24.72■■□□□ 1.55
HDAC8-218ENST00000486704 KIF15Q9NS87 1388 aa24.72■■□□□ 1.55
HDAC8-218ENST00000486704 ADGRL2O95490 1459 aa24.71■■□□□ 1.55
HDAC8-218ENST00000486704 DEPDC5O75140 1603 aa24.71■■□□□ 1.55
HDAC8-218ENST00000486704 PTPRKQ15262 1439 aa24.7■■□□□ 1.55
HDAC8-218ENST00000486704 PRDM15P57071 1507 aaPredicted RBP24.69■■□□□ 1.54
HDAC8-218ENST00000486704 ABCC3O15438 1527 aa24.67■■□□□ 1.54
HDAC8-218ENST00000486704 CEP152O94986 1710 aa24.67■■□□□ 1.54
HDAC8-218ENST00000486704 PZPP20742 1482 aa24.67■■□□□ 1.54
HDAC8-218ENST00000486704 ANKRD30AQ9BXX3 1397 aa24.67■■□□□ 1.54
HDAC8-218ENST00000486704 HSPA2P54652 639 aa24.66■■□□□ 1.54
HDAC8-218ENST00000486704 STRCQ7RTU9 1775 aa24.65■■□□□ 1.54
HDAC8-218ENST00000486704 NCOA1Q15788 1441 aa24.65■■□□□ 1.54
HDAC8-218ENST00000486704 CAMSAP1Q5T5Y3 1602 aa24.64■■□□□ 1.53
HDAC8-218ENST00000486704 FAM50AQ14320 339 aaKnown RBP24.63■■□□□ 1.53
HDAC8-218ENST00000486704 CEP170BQ9Y4F5 1589 aaPredicted RBP24.63■■□□□ 1.53
HDAC8-218ENST00000486704 WASHC2CQ9Y4E1 1318 aa24.61■■□□□ 1.53
HDAC8-218ENST00000486704 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.61■■□□□ 1.53
HDAC8-218ENST00000486704 RRP7BPQ9NSQ0 103 aa24.6■■□□□ 1.53
HDAC8-218ENST00000486704 SPATA31D1Q6ZQQ2 1576 aa24.56■■□□□ 1.52
HDAC8-218ENST00000486704 VWDEQ8N2E2 1590 aa24.56■■□□□ 1.52
HDAC8-218ENST00000486704 CHIC2Q9UKJ5 165 aa24.56■■□□□ 1.52
HDAC8-218ENST00000486704 A2ML1A8K2U0 1454 aa24.54■■□□□ 1.52
HDAC8-218ENST00000486704 ROCK1Q13464 1354 aa24.53■■□□□ 1.52
HDAC8-218ENST00000486704 TNRQ92752 1358 aa24.53■■□□□ 1.52
HDAC8-218ENST00000486704 RRBP1Q9P2E9 1410 aaKnown RBP24.52■■□□□ 1.52
HDAC8-218ENST00000486704 LMTK2Q8IWU2 1503 aa24.52■■□□□ 1.52
HDAC8-218ENST00000486704 PLA2R1Q13018 1463 aa24.51■■□□□ 1.51
HDAC8-218ENST00000486704 PPARGC1BQ86YN6 1023 aaKnown RBP24.51■■□□□ 1.51
HDAC8-218ENST00000486704 ARHGAP31Q2M1Z3 1444 aa24.51■■□□□ 1.51
HDAC8-218ENST00000486704 ANKRD50Q9ULJ7 1429 aa24.5■■□□□ 1.51
HDAC8-218ENST00000486704 ERVK-7P63135 1459 aa24.5■■□□□ 1.51
HDAC8-218ENST00000486704 NLRP1Q9C000 1473 aa24.5■■□□□ 1.51
HDAC8-218ENST00000486704 UNC13BO14795 1591 aa24.49■■□□□ 1.51
HDAC8-218ENST00000486704 KANK1Q14678 1352 aa24.48■■□□□ 1.51
HDAC8-218ENST00000486704 FBXO31Q5XUX0 539 aaPredicted RBP24.48■■□□□ 1.51
HDAC8-218ENST00000486704 CFAP65Q6ZU64 1925 aaKnown RBP24.48■■□□□ 1.51
HDAC8-218ENST00000486704 POLR1AO95602 1720 aaPredicted RBP24.47■■□□□ 1.51
HDAC8-218ENST00000486704 PTPRTO14522 1441 aa24.46■■□□□ 1.51
HDAC8-218ENST00000486704 EFCAB6Q5THR3 1501 aa24.45■■□□□ 1.51
HDAC8-218ENST00000486704 DMRT2Q9Y5R5 561 aa24.44■■□□□ 1.5
HDAC8-218ENST00000486704 TET3O43151 1660 aa24.42■■□□□ 1.5
HDAC8-218ENST00000486704 GCC2Q8IWJ2 1684 aa24.42■■□□□ 1.5
HDAC8-218ENST00000486704 UGGT1Q9NYU2 1555 aa24.42■■□□□ 1.5
HDAC8-218ENST00000486704 UBR1Q8IWV7 1749 aa24.39■■□□□ 1.5
HDAC8-218ENST00000486704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.39■■□□□ 1.49
HDAC8-218ENST00000486704 IQGAP3Q86VI3 1631 aa24.39■■□□□ 1.49
HDAC8-218ENST00000486704 KDM5AP29375 1690 aaKnown RBP24.37■■□□□ 1.49
HDAC8-218ENST00000486704 RPRD2Q5VT52 1461 aaKnown RBP24.36■■□□□ 1.49
HDAC8-218ENST00000486704 NEURL4Q96JN8 1562 aa24.35■■□□□ 1.49
HDAC8-218ENST00000486704 PKD2Q13563 968 aa24.35■■□□□ 1.49
HDAC8-218ENST00000486704 SYNMO15061 1565 aa24.34■■□□□ 1.49
HDAC8-218ENST00000486704 PIK3C2BO00750 1634 aa24.32■■□□□ 1.48
HDAC8-218ENST00000486704 ITGAEP38570 1179 aa24.32■■□□□ 1.48
HDAC8-218ENST00000486704 NOS1P29475 1434 aa24.31■■□□□ 1.48
HDAC8-218ENST00000486704 E9PCH4 1651 aa24.3■■□□□ 1.48
HDAC8-218ENST00000486704 NCKAP5LQ9HCH0 1330 aa24.3■■□□□ 1.48
HDAC8-218ENST00000486704 THEMISQ8N1K5 641 aaPredicted RBP24.29■■□□□ 1.48
HDAC8-218ENST00000486704 LTBP4Q8N2S1 1624 aa24.28■■□□□ 1.48
HDAC8-218ENST00000486704 MED14O60244 1454 aa24.26■■□□□ 1.47
HDAC8-218ENST00000486704 NAIPQ13075 1403 aa24.26■■□□□ 1.47
HDAC8-218ENST00000486704 SLIT1O75093 1534 aa24.25■■□□□ 1.47
HDAC8-218ENST00000486704 IQGAP1P46940 1657 aa24.25■■□□□ 1.47
HDAC8-218ENST00000486704 ARHGAP23Q9P227 1491 aa24.24■■□□□ 1.47
HDAC8-218ENST00000486704 HFM1A2PYH4 1435 aa24.23■■□□□ 1.47
HDAC8-218ENST00000486704 ADGRB3O60242 1522 aa24.23■■□□□ 1.47
HDAC8-218ENST00000486704 ILDR1Q86SU0 546 aaPredicted RBP24.22■■□□□ 1.47
HDAC8-218ENST00000486704 ANKLE2Q86XL3 938 aa24.2■■□□□ 1.46
HDAC8-218ENST00000486704 CERKQ8TCT0 537 aa24.2■■□□□ 1.46
HDAC8-218ENST00000486704 NUP155O75694 1391 aa24.19■■□□□ 1.46
HDAC8-218ENST00000486704 MYO5BQ9ULV0 1848 aa24.19■■□□□ 1.46
HDAC8-218ENST00000486704 IQSEC2Q5JU85 1478 aa24.19■■□□□ 1.46
HDAC8-218ENST00000486704 NPHP4O75161 1426 aaPredicted RBP24.18■■□□□ 1.46
HDAC8-218ENST00000486704 FBXO41Q8TF61 875 aa24.18■■□□□ 1.46
HDAC8-218ENST00000486704 SCAF11Q99590 1463 aaKnown RBP24.18■■□□□ 1.46
HDAC8-218ENST00000486704 SPHKAPQ2M3C7 1700 aa24.18■■□□□ 1.46
HDAC8-218ENST00000486704 SLC52A1Q9NWF4 448 aa24.15■■□□□ 1.46
HDAC8-218ENST00000486704 TMEM131LA2VDJ0 1609 aa24.14■■□□□ 1.46
HDAC8-218ENST00000486704 IDI1Q13907 227 aa24.14■■□□□ 1.45
HDAC8-218ENST00000486704 TMEM2Q9UHN6 1383 aa24.13■■□□□ 1.45
HDAC8-218ENST00000486704 ZNF335Q9H4Z2 1342 aaPredicted RBP24.12■■□□□ 1.45
HDAC8-218ENST00000486704 CPS1P31327 1500 aa24.1■■□□□ 1.45
HDAC8-218ENST00000486704 STAG3Q9UJ98 1225 aa24.08■■□□□ 1.45
HDAC8-218ENST00000486704 STRCP1A6NGW2 1772 aa24.06■■□□□ 1.44
HDAC8-218ENST00000486704 LTKP29376 864 aa24.05■■□□□ 1.44
HDAC8-218ENST00000486704 EID1Q9Y6B2 187 aa24.05■■□□□ 1.44
HDAC8-218ENST00000486704 ZFYVE9O95405 1425 aa24.04■■□□□ 1.44
HDAC8-218ENST00000486704 TXNDC2Q86VQ3 553 aa24.04■■□□□ 1.44
HDAC8-218ENST00000486704 TRPM2O94759 1503 aa24.04■■□□□ 1.44
HDAC8-218ENST00000486704 CLTCL1P53675 1640 aa24■■□□□ 1.43
HDAC8-218ENST00000486704 KIF1BO60333 1816 aa23.98■■□□□ 1.43
HDAC8-218ENST00000486704 RIMS2Q9UQ26 1411 aa23.97■■□□□ 1.43
HDAC8-218ENST00000486704 PLEKHG1Q9ULL1 1385 aa23.93■■□□□ 1.42
HDAC8-218ENST00000486704 TRIM52Q96A61 297 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms