RNA–Protein interactions for RNA: ENST00000486461.1

PDZD11-204, Transcript of PDZ domain containing 11, humanhuman

TSL 3

Gene PDZD11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD11-204ENST00000486461 FAM135AQ9P2D6 1515 aa10.09□□□□□ -0.79
PDZD11-204ENST00000486461 FBXO31Q5XUX0 539 aaPredicted RBP10.09□□□□□ -0.79
PDZD11-204ENST00000486461 ZNF777Q9ULD5 760 aaPredicted RBP10.08□□□□□ -0.8
PDZD11-204ENST00000486461 UGGT1Q9NYU2 1555 aa10.08□□□□□ -0.8
PDZD11-204ENST00000486461 FMN1Q68DA7 1419 aa10.07□□□□□ -0.8
PDZD11-204ENST00000486461 ATP7AQ04656 1500 aa10.07□□□□□ -0.8
PDZD11-204ENST00000486461 NLRP1Q9C000 1473 aa10.06□□□□□ -0.8
PDZD11-204ENST00000486461 ZNF772Q68DY9 489 aaPredicted RBP10.06□□□□□ -0.8
PDZD11-204ENST00000486461 PZPP20742 1482 aa10.05□□□□□ -0.8
PDZD11-204ENST00000486461 HNRNPMP52272 730 aaKnown RBP eCLIP10.05□□□□□ -0.8
PDZD11-204ENST00000486461 SYCP2Q9BX26 1530 aa10.05□□□□□ -0.8
PDZD11-204ENST00000486461 XIRP1Q702N8 1843 aaKnown RBP10.05□□□□□ -0.8
PDZD11-204ENST00000486461 SRCAPQ6ZRS2 3230 aa10.05□□□□□ -0.8
PDZD11-204ENST00000486461 ROBO1Q9Y6N7 1651 aa10.04□□□□□ -0.8
PDZD11-204ENST00000486461 MIA2Q96PC5 1412 aa10.04□□□□□ -0.8
PDZD11-204ENST00000486461 CDC42BPAQ5VT25 1732 aa10.04□□□□□ -0.8
PDZD11-204ENST00000486461 JCADQ9P266 1359 aa10.03□□□□□ -0.8
PDZD11-204ENST00000486461 RXRBP28702 533 aa10.03□□□□□ -0.8
PDZD11-204ENST00000486461 MEX3CQ5U5Q3 659 aaKnown RBP10.03□□□□□ -0.8
PDZD11-204ENST00000486461 INO80Q9ULG1 1556 aaPredicted RBP10.03□□□□□ -0.8
PDZD11-204ENST00000486461 ADGBQ8N7X0 1667 aa10.02□□□□□ -0.8
PDZD11-204ENST00000486461 ZC3H13Q5T200 1668 aaKnown RBP10.02□□□□□ -0.81
PDZD11-204ENST00000486461 KDM5DQ9BY66 1539 aa10.02□□□□□ -0.81
PDZD11-204ENST00000486461 FOXD1Q16676 465 aa10.01□□□□□ -0.81
PDZD11-204ENST00000486461 PHLPP1O60346 1717 aa10□□□□□ -0.81
PDZD11-204ENST00000486461 LRRIQ1Q96JM4 1722 aa10□□□□□ -0.81
PDZD11-204ENST00000486461 WASHC2CQ9Y4E1 1318 aa10□□□□□ -0.81
PDZD11-204ENST00000486461 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
PDZD11-204ENST00000486461 LRRC9Q6ZRR7 1453 aa9.99□□□□□ -0.81
PDZD11-204ENST00000486461 CDK12Q9NYV4 1490 aaPredicted RBP9.99□□□□□ -0.81
PDZD11-204ENST00000486461 KIF3BO15066 747 aa9.99□□□□□ -0.81
PDZD11-204ENST00000486461 ZRANB1Q9UGI0 708 aa9.99□□□□□ -0.81
PDZD11-204ENST00000486461 TMEM94Q12767 1356 aa9.99□□□□□ -0.81
PDZD11-204ENST00000486461 PLEKHH2Q8IVE3 1493 aa9.98□□□□□ -0.81
PDZD11-204ENST00000486461 SPATA31A6Q5VVP1 1343 aa9.98□□□□□ -0.81
PDZD11-204ENST00000486461 SCAF11Q99590 1463 aaKnown RBP9.98□□□□□ -0.81
PDZD11-204ENST00000486461 LRP6O75581 1613 aa9.97□□□□□ -0.81
PDZD11-204ENST00000486461 DHX29Q7Z478 1369 aaKnown RBP9.97□□□□□ -0.81
PDZD11-204ENST00000486461 TXNDC2Q86VQ3 553 aa9.96□□□□□ -0.82
PDZD11-204ENST00000486461 CFDP1Q9UEE9 299 aaPredicted RBP9.96□□□□□ -0.82
PDZD11-204ENST00000486461 GPATCH8Q9UKJ3 1502 aaKnown RBP9.96□□□□□ -0.82
PDZD11-204ENST00000486461 PROSER2Q86WR7 435 aaPredicted RBP9.95□□□□□ -0.82
PDZD11-204ENST00000486461 EEA1Q15075 1411 aa9.95□□□□□ -0.82
PDZD11-204ENST00000486461 ARHGAP35Q9NRY4 1499 aa9.95□□□□□ -0.82
PDZD11-204ENST00000486461 CCDC18Q5T9S5 1454 aa9.94□□□□□ -0.82
PDZD11-204ENST00000486461 FGD6Q6ZV73 1430 aa9.94□□□□□ -0.82
PDZD11-204ENST00000486461 NUTM2BA6NNL0 878 aaPredicted RBP9.94□□□□□ -0.82
PDZD11-204ENST00000486461 NUTM2EB1AL46 878 aaPredicted RBP9.94□□□□□ -0.82
PDZD11-204ENST00000486461 LTKP29376 864 aa9.94□□□□□ -0.82
PDZD11-204ENST00000486461 NUTM2DQ5VT03 806 aaPredicted RBP9.94□□□□□ -0.82
PDZD11-204ENST00000486461 CHIC1Q5VXU3 224 aa9.94□□□□□ -0.82
PDZD11-204ENST00000486461 NUTM2AQ8IVF1 878 aaPredicted RBP9.94□□□□□ -0.82
PDZD11-204ENST00000486461 SLAIN2Q9P270 581 aa9.94□□□□□ -0.82
PDZD11-204ENST00000486461 MAP3K1Q13233 1512 aa9.93□□□□□ -0.82
PDZD11-204ENST00000486461 MSH6P52701 1360 aa9.93□□□□□ -0.82
PDZD11-204ENST00000486461 KCNA6P17658 529 aa9.93□□□□□ -0.82
PDZD11-204ENST00000486461 RBM33Q96EV2 1170 aaKnown RBP9.93□□□□□ -0.82
PDZD11-204ENST00000486461 EID1Q9Y6B2 187 aa9.93□□□□□ -0.82
PDZD11-204ENST00000486461 COL16A1Q07092 1604 aaPredicted RBP9.93□□□□□ -0.82
PDZD11-204ENST00000486461 SETBP1Q9Y6X0 1596 aa9.92□□□□□ -0.82
PDZD11-204ENST00000486461 RTEL1-TNFRSF6BF6WH68 1400 aa9.92□□□□□ -0.82
PDZD11-204ENST00000486461 UBR1Q8IWV7 1749 aa9.92□□□□□ -0.82
PDZD11-204ENST00000486461 UBTFP17480 764 aaKnown RBP9.91□□□□□ -0.82
PDZD11-204ENST00000486461 RGS12O14924 1447 aa9.9□□□□□ -0.82
PDZD11-204ENST00000486461 CFAP65Q6ZU64 1925 aaKnown RBP9.9□□□□□ -0.82
PDZD11-204ENST00000486461 AFF2P51816 1311 aa9.9□□□□□ -0.82
PDZD11-204ENST00000486461 RBM6P78332 1123 aaKnown RBP9.9□□□□□ -0.82
PDZD11-204ENST00000486461 SLIT1O75093 1534 aa9.9□□□□□ -0.82
PDZD11-204ENST00000486461 ARHGAP23Q9P227 1491 aa9.9□□□□□ -0.83
PDZD11-204ENST00000486461 ATAD2Q6PL18 1390 aa9.89□□□□□ -0.83
PDZD11-204ENST00000486461 CCNB3Q8WWL7 1395 aa9.89□□□□□ -0.83
PDZD11-204ENST00000486461 PRDM15P57071 1507 aaPredicted RBP9.89□□□□□ -0.83
PDZD11-204ENST00000486461 ERVK-7P63135 1459 aa9.89□□□□□ -0.83
PDZD11-204ENST00000486461 NCOA2Q15596 1464 aa9.89□□□□□ -0.83
PDZD11-204ENST00000486461 SHPRHQ149N8 1683 aa9.89□□□□□ -0.83
PDZD11-204ENST00000486461 TIAM1Q13009 1591 aa9.88□□□□□ -0.83
PDZD11-204ENST00000486461 QTRT2Q9H974 415 aaKnown RBP9.88□□□□□ -0.83
PDZD11-204ENST00000486461 CASKIN1Q8WXD9 1431 aa9.88□□□□□ -0.83
PDZD11-204ENST00000486461 EHMT2Q96KQ7 1210 aa9.87□□□□□ -0.83
PDZD11-204ENST00000486461 ABCC3O15438 1527 aa9.87□□□□□ -0.83
PDZD11-204ENST00000486461 ZNF644Q9H582 1327 aaPredicted RBP9.86□□□□□ -0.83
PDZD11-204ENST00000486461 NKTRP30414 1462 aaKnown RBP9.86□□□□□ -0.83
PDZD11-204ENST00000486461 MBD5Q9P267 1494 aa9.86□□□□□ -0.83
PDZD11-204ENST00000486461 SLC26A8Q96RN1 970 aa9.86□□□□□ -0.83
PDZD11-204ENST00000486461 NGLY1Q96IV0 654 aa9.85□□□□□ -0.83
PDZD11-204ENST00000486461 STAG3Q9UJ98 1225 aa9.84□□□□□ -0.83
PDZD11-204ENST00000486461 AHDC1Q5TGY3 1603 aaPredicted RBP9.84□□□□□ -0.83
PDZD11-204ENST00000486461 TMEM2Q9UHN6 1383 aa9.84□□□□□ -0.83
PDZD11-204ENST00000486461 CCDC125Q86Z20 511 aa9.83□□□□□ -0.84
PDZD11-204ENST00000486461 C8orf37Q96NL8 207 aa9.83□□□□□ -0.84
PDZD11-204ENST00000486461 NWD1Q149M9 1564 aa9.83□□□□□ -0.84
PDZD11-204ENST00000486461 KDM5AP29375 1690 aaKnown RBP9.83□□□□□ -0.84
PDZD11-204ENST00000486461 TET3O43151 1660 aa9.81□□□□□ -0.84
PDZD11-204ENST00000486461 CCDC141Q6ZP82 1450 aa9.81□□□□□ -0.84
PDZD11-204ENST00000486461 C14orf37Q86TY3 774 aa9.81□□□□□ -0.84
PDZD11-204ENST00000486461 BCANQ96GW7 911 aa9.81□□□□□ -0.84
PDZD11-204ENST00000486461 FYCO1Q9BQS8 1478 aa9.8□□□□□ -0.84
PDZD11-204ENST00000486461 RSPH4AQ5TD94 716 aa9.8□□□□□ -0.84
PDZD11-204ENST00000486461 CADPS2Q86UW7 1296 aa9.8□□□□□ -0.84
PDZD11-204ENST00000486461 LRP5O75197 1615 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms