RNA–Protein interactions for RNA: ENST00000486420.1

C9orf16-202, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 5

Gene C9orf16, Length 434 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-202ENST00000486420 NCOA1Q15788 1441 aa18.78■□□□□ 0.6
C9orf16-202ENST00000486420 SETD1BQ9UPS6 1966 aaKnown RBP18.77■□□□□ 0.59
C9orf16-202ENST00000486420 ACIN1Q9UKV3 1341 aaKnown RBP18.76■□□□□ 0.59
C9orf16-202ENST00000486420 KIF3BO15066 747 aa18.73■□□□□ 0.59
C9orf16-202ENST00000486420 RRP7BPQ9NSQ0 103 aa18.73■□□□□ 0.59
C9orf16-202ENST00000486420 PLPPR3Q6T4P5 718 aa18.72■□□□□ 0.59
C9orf16-202ENST00000486420 CLTCQ00610 1675 aaKnown RBP18.72■□□□□ 0.59
C9orf16-202ENST00000486420 KANK1Q14678 1352 aa18.71■□□□□ 0.59
C9orf16-202ENST00000486420 CHIC2Q9UKJ5 165 aa18.71■□□□□ 0.59
C9orf16-202ENST00000486420 UHRF1BP1Q6BDS2 1440 aa18.71■□□□□ 0.59
C9orf16-202ENST00000486420 GGT6Q6P531 493 aa18.7■□□□□ 0.58
C9orf16-202ENST00000486420 ANKRD50Q9ULJ7 1429 aa18.68■□□□□ 0.58
C9orf16-202ENST00000486420 RNF17Q9BXT8 1623 aaKnown RBP18.68■□□□□ 0.58
C9orf16-202ENST00000486420 KDM5DQ9BY66 1539 aa18.67■□□□□ 0.58
C9orf16-202ENST00000486420 ZC3H13Q5T200 1668 aaKnown RBP18.66■□□□□ 0.58
C9orf16-202ENST00000486420 ITGAEP38570 1179 aa18.66■□□□□ 0.58
C9orf16-202ENST00000486420 WASHC2CQ9Y4E1 1318 aa18.66■□□□□ 0.58
C9orf16-202ENST00000486420 NPATQ14207 1427 aa18.66■□□□□ 0.58
C9orf16-202ENST00000486420 CEBPAP49715 358 aaPredicted RBP18.65■□□□□ 0.58
C9orf16-202ENST00000486420 ZNF142P52746 1687 aaPredicted RBP18.64■□□□□ 0.57
C9orf16-202ENST00000486420 HSPA2P54652 639 aa18.63■□□□□ 0.57
C9orf16-202ENST00000486420 PTPRKQ15262 1439 aa18.63■□□□□ 0.57
C9orf16-202ENST00000486420 PRDM15P57071 1507 aaPredicted RBP18.63■□□□□ 0.57
C9orf16-202ENST00000486420 MYO3AQ8NEV4 1616 aa18.62■□□□□ 0.57
C9orf16-202ENST00000486420 DEPDC5O75140 1603 aa18.61■□□□□ 0.57
C9orf16-202ENST00000486420 HFM1A2PYH4 1435 aa18.61■□□□□ 0.57
C9orf16-202ENST00000486420 STRCQ7RTU9 1775 aa18.6■□□□□ 0.57
C9orf16-202ENST00000486420 ZMYM3Q14202 1370 aa18.6■□□□□ 0.57
C9orf16-202ENST00000486420 LMTK2Q8IWU2 1503 aa18.56■□□□□ 0.56
C9orf16-202ENST00000486420 ARHGAP31Q2M1Z3 1444 aa18.56■□□□□ 0.56
C9orf16-202ENST00000486420 ABCC3O15438 1527 aa18.55■□□□□ 0.56
C9orf16-202ENST00000486420 GCC2Q8IWJ2 1684 aa18.55■□□□□ 0.56
C9orf16-202ENST00000486420 PZPP20742 1482 aa18.55■□□□□ 0.56
C9orf16-202ENST00000486420 NAIPQ13075 1403 aa18.55■□□□□ 0.56
C9orf16-202ENST00000486420 CEP170BQ9Y4F5 1589 aaPredicted RBP18.55■□□□□ 0.56
C9orf16-202ENST00000486420 MROH1Q8NDA8 1641 aa18.54■□□□□ 0.56
C9orf16-202ENST00000486420 UNC13BO14795 1591 aa18.54■□□□□ 0.56
C9orf16-202ENST00000486420 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.53■□□□□ 0.56
C9orf16-202ENST00000486420 RPRD2Q5VT52 1461 aaKnown RBP18.52■□□□□ 0.56
C9orf16-202ENST00000486420 VWDEQ8N2E2 1590 aa18.52■□□□□ 0.56
C9orf16-202ENST00000486420 ILDR1Q86SU0 546 aaPredicted RBP18.51■□□□□ 0.55
C9orf16-202ENST00000486420 CAMSAP1Q5T5Y3 1602 aa18.51■□□□□ 0.55
C9orf16-202ENST00000486420 DMRT2Q9Y5R5 561 aa18.49■□□□□ 0.55
C9orf16-202ENST00000486420 PTPRTO14522 1441 aa18.49■□□□□ 0.55
C9orf16-202ENST00000486420 PLA2R1Q13018 1463 aa18.48■□□□□ 0.55
C9orf16-202ENST00000486420 NUP155O75694 1391 aa18.48■□□□□ 0.55
C9orf16-202ENST00000486420 HRCP23327 699 aa18.48■□□□□ 0.55
C9orf16-202ENST00000486420 CEP152O94986 1710 aa18.48■□□□□ 0.55
C9orf16-202ENST00000486420 NLRP1Q9C000 1473 aa18.46■□□□□ 0.55
C9orf16-202ENST00000486420 IQGAP3Q86VI3 1631 aa18.46■□□□□ 0.55
C9orf16-202ENST00000486420 EFCAB6Q5THR3 1501 aa18.46■□□□□ 0.55
C9orf16-202ENST00000486420 TET3O43151 1660 aa18.46■□□□□ 0.55
C9orf16-202ENST00000486420 SETD5Q9C0A6 1442 aa18.46■□□□□ 0.55
C9orf16-202ENST00000486420 A2ML1A8K2U0 1454 aa18.46■□□□□ 0.54
C9orf16-202ENST00000486420 TNRQ92752 1358 aa18.45■□□□□ 0.54
C9orf16-202ENST00000486420 POLR1AO95602 1720 aaPredicted RBP18.44■□□□□ 0.54
C9orf16-202ENST00000486420 FBXO41Q8TF61 875 aa18.44■□□□□ 0.54
C9orf16-202ENST00000486420 SPATA31D1Q6ZQQ2 1576 aa18.43■□□□□ 0.54
C9orf16-202ENST00000486420 ERVK-7P63135 1459 aa18.42■□□□□ 0.54
C9orf16-202ENST00000486420 TRIM52Q96A61 297 aa18.41■□□□□ 0.54
C9orf16-202ENST00000486420 SLC52A1Q9NWF4 448 aa18.41■□□□□ 0.54
C9orf16-202ENST00000486420 TRIM26Q12899 539 aaPredicted RBP18.4■□□□□ 0.54
C9orf16-202ENST00000486420 THEMISQ8N1K5 641 aaPredicted RBP18.38■□□□□ 0.53
C9orf16-202ENST00000486420 NOS1P29475 1434 aa18.36■□□□□ 0.53
C9orf16-202ENST00000486420 PKD2Q13563 968 aa18.36■□□□□ 0.53
C9orf16-202ENST00000486420 FBXO31Q5XUX0 539 aaPredicted RBP18.36■□□□□ 0.53
C9orf16-202ENST00000486420 SLC4A1APQ9BWU0 796 aaKnown RBP18.36■□□□□ 0.53
C9orf16-202ENST00000486420 UGGT1Q9NYU2 1555 aa18.35■□□□□ 0.53
C9orf16-202ENST00000486420 CERKQ8TCT0 537 aa18.35■□□□□ 0.53
C9orf16-202ENST00000486420 LTBP4Q8N2S1 1624 aa18.34■□□□□ 0.53
C9orf16-202ENST00000486420 NEURL4Q96JN8 1562 aa18.34■□□□□ 0.53
C9orf16-202ENST00000486420 IQSEC2Q5JU85 1478 aa18.33■□□□□ 0.53
C9orf16-202ENST00000486420 RAB3GAP2Q9H2M9 1393 aa18.33■□□□□ 0.53
C9orf16-202ENST00000486420 KDM5AP29375 1690 aaKnown RBP18.33■□□□□ 0.52
C9orf16-202ENST00000486420 CFAP65Q6ZU64 1925 aaKnown RBP18.33■□□□□ 0.52
C9orf16-202ENST00000486420 HDGFP51858 240 aaKnown RBP18.31■□□□□ 0.52
C9orf16-202ENST00000486420 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
C9orf16-202ENST00000486420 UBR1Q8IWV7 1749 aa18.31■□□□□ 0.52
C9orf16-202ENST00000486420 E9PCH4 1651 aa18.3■□□□□ 0.52
C9orf16-202ENST00000486420 NCKAP5LQ9HCH0 1330 aa18.29■□□□□ 0.52
C9orf16-202ENST00000486420 MPHOSPH9Q99550 1183 aa18.28■□□□□ 0.52
C9orf16-202ENST00000486420 IQGAP1P46940 1657 aa18.26■□□□□ 0.51
C9orf16-202ENST00000486420 ANKLE2Q86XL3 938 aa18.26■□□□□ 0.51
C9orf16-202ENST00000486420 EID1Q9Y6B2 187 aa18.26■□□□□ 0.51
C9orf16-202ENST00000486420 TRPM2O94759 1503 aa18.25■□□□□ 0.51
C9orf16-202ENST00000486420 IDI1Q13907 227 aa18.25■□□□□ 0.51
C9orf16-202ENST00000486420 MED14O60244 1454 aa18.25■□□□□ 0.51
C9orf16-202ENST00000486420 SYNMO15061 1565 aa18.25■□□□□ 0.51
C9orf16-202ENST00000486420 SPHKAPQ2M3C7 1700 aa18.24■□□□□ 0.51
C9orf16-202ENST00000486420 ADGRB3O60242 1522 aa18.23■□□□□ 0.51
C9orf16-202ENST00000486420 PIK3C2BO00750 1634 aa18.23■□□□□ 0.51
C9orf16-202ENST00000486420 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.22■□□□□ 0.51
C9orf16-202ENST00000486420 SLIT1O75093 1534 aa18.21■□□□□ 0.51
C9orf16-202ENST00000486420 CPS1P31327 1500 aa18.2■□□□□ 0.5
C9orf16-202ENST00000486420 CCDC144AA2RUR9 1427 aa18.2■□□□□ 0.5
C9orf16-202ENST00000486420 NPHP4O75161 1426 aaPredicted RBP18.2■□□□□ 0.5
C9orf16-202ENST00000486420 ZNF335Q9H4Z2 1342 aaPredicted RBP18.2■□□□□ 0.5
C9orf16-202ENST00000486420 TMEM2Q9UHN6 1383 aa18.19■□□□□ 0.5
C9orf16-202ENST00000486420 ARHGAP23Q9P227 1491 aa18.19■□□□□ 0.5
C9orf16-202ENST00000486420 SCAF11Q99590 1463 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms