RNA–Protein interactions for RNA: ENST00000486335.1

CCDC142-208, Transcript of coiled-coil domain containing 142, humanhuman

TSL 5

Gene CCDC142, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC142-208ENST00000486335 CPS1P31327 1500 aa15.08■□□□□ 0.01
CCDC142-208ENST00000486335 DHX29Q7Z478 1369 aaKnown RBP15.08■□□□□ 0
CCDC142-208ENST00000486335 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.08■□□□□ 0
CCDC142-208ENST00000486335 TNRQ92752 1358 aa15.07■□□□□ 0
CCDC142-208ENST00000486335 PLEKHH2Q8IVE3 1493 aa15.06■□□□□ 0
CCDC142-208ENST00000486335 FYCO1Q9BQS8 1478 aa15.06■□□□□ 0
CCDC142-208ENST00000486335 ANKLE2Q86XL3 938 aa15.05■□□□□ -0
CCDC142-208ENST00000486335 MED14O60244 1454 aa15.04■□□□□ -0
CCDC142-208ENST00000486335 RTEL1-TNFRSF6BF6WH68 1400 aa15.04■□□□□ -0
CCDC142-208ENST00000486335 MIA2Q96PC5 1412 aa15.04■□□□□ -0
CCDC142-208ENST00000486335 CCNB3Q8WWL7 1395 aa15.04■□□□□ -0
CCDC142-208ENST00000486335 KIF3BO15066 747 aa15.03■□□□□ -0
CCDC142-208ENST00000486335 PZPP20742 1482 aa15.02■□□□□ -0
CCDC142-208ENST00000486335 NPHP4O75161 1426 aaPredicted RBP15.01□□□□□ -0.01
CCDC142-208ENST00000486335 THEMISQ8N1K5 641 aaPredicted RBP15.01□□□□□ -0.01
CCDC142-208ENST00000486335 LRRC7Q96NW7 1537 aa15.01□□□□□ -0.01
CCDC142-208ENST00000486335 STRCP1A6NGW2 1772 aa15.01□□□□□ -0.01
CCDC142-208ENST00000486335 ADGBQ8N7X0 1667 aa15□□□□□ -0.01
CCDC142-208ENST00000486335 PHF23Q9BUL5 403 aaPredicted RBP14.99□□□□□ -0.01
CCDC142-208ENST00000486335 SENP3Q9H4L4 574 aaPredicted RBP14.99□□□□□ -0.01
CCDC142-208ENST00000486335 POLR1AO95602 1720 aaPredicted RBP14.99□□□□□ -0.01
CCDC142-208ENST00000486335 TIAM1Q13009 1591 aa14.98□□□□□ -0.01
CCDC142-208ENST00000486335 WASHC2CQ9Y4E1 1318 aa14.97□□□□□ -0.01
CCDC142-208ENST00000486335 DEPDC5O75140 1603 aa14.95□□□□□ -0.02
CCDC142-208ENST00000486335 NLRP1Q9C000 1473 aa14.95□□□□□ -0.02
CCDC142-208ENST00000486335 UGGT1Q9NYU2 1555 aa14.95□□□□□ -0.02
CCDC142-208ENST00000486335 KDM5DQ9BY66 1539 aa14.95□□□□□ -0.02
CCDC142-208ENST00000486335 MTUS2Q5JR59 1369 aa14.95□□□□□ -0.02
CCDC142-208ENST00000486335 LTKP29376 864 aa14.94□□□□□ -0.02
CCDC142-208ENST00000486335 POTEAQ6S8J7 498 aa14.94□□□□□ -0.02
CCDC142-208ENST00000486335 FAM135AQ9P2D6 1515 aa14.92□□□□□ -0.02
CCDC142-208ENST00000486335 CEP162Q5TB80 1403 aa14.92□□□□□ -0.02
CCDC142-208ENST00000486335 NCOA2Q15596 1464 aa14.9□□□□□ -0.02
CCDC142-208ENST00000486335 IQGAP1P46940 1657 aa14.9□□□□□ -0.02
CCDC142-208ENST00000486335 CCDC141Q6ZP82 1450 aa14.89□□□□□ -0.03
CCDC142-208ENST00000486335 RSPH4AQ5TD94 716 aa14.88□□□□□ -0.03
CCDC142-208ENST00000486335 ZC3H13Q5T200 1668 aaKnown RBP14.87□□□□□ -0.03
CCDC142-208ENST00000486335 ERVK-7P63135 1459 aa14.87□□□□□ -0.03
CCDC142-208ENST00000486335 ABCC3O15438 1527 aa14.87□□□□□ -0.03
CCDC142-208ENST00000486335 FAM135BQ49AJ0 1406 aa14.86□□□□□ -0.03
CCDC142-208ENST00000486335 CAMSAP2Q08AD1 1489 aa14.86□□□□□ -0.03
CCDC142-208ENST00000486335 ARHGAP23Q9P227 1491 aa14.86□□□□□ -0.03
CCDC142-208ENST00000486335 RNF17Q9BXT8 1623 aaKnown RBP14.85□□□□□ -0.03
CCDC142-208ENST00000486335 XIRP1Q702N8 1843 aaKnown RBP14.85□□□□□ -0.03
CCDC142-208ENST00000486335 EHBP1L1Q8N3D4 1523 aa14.84□□□□□ -0.03
CCDC142-208ENST00000486335 TXNDC2Q86VQ3 553 aa14.83□□□□□ -0.04
CCDC142-208ENST00000486335 MROH1Q8NDA8 1641 aa14.83□□□□□ -0.04
CCDC142-208ENST00000486335 SYNMO15061 1565 aa14.82□□□□□ -0.04
CCDC142-208ENST00000486335 SCAF11Q99590 1463 aaKnown RBP14.82□□□□□ -0.04
CCDC142-208ENST00000486335 RBM33Q96EV2 1170 aaKnown RBP14.81□□□□□ -0.04
CCDC142-208ENST00000486335 SLIT1O75093 1534 aa14.81□□□□□ -0.04
CCDC142-208ENST00000486335 TSPY4P0CV99 314 aa14.8□□□□□ -0.04
CCDC142-208ENST00000486335 TSPY10P0CW01 314 aa14.8□□□□□ -0.04
CCDC142-208ENST00000486335 ARHGEF5Q12774 1597 aa14.8□□□□□ -0.04
CCDC142-208ENST00000486335 UBR1Q8IWV7 1749 aa14.8□□□□□ -0.04
CCDC142-208ENST00000486335 TMEM94Q12767 1356 aa14.78□□□□□ -0.04
CCDC142-208ENST00000486335 CFAP65Q6ZU64 1925 aaKnown RBP14.76□□□□□ -0.05
CCDC142-208ENST00000486335 TMEM2Q9UHN6 1383 aa14.76□□□□□ -0.05
CCDC142-208ENST00000486335 KCNA6P17658 529 aa14.76□□□□□ -0.05
CCDC142-208ENST00000486335 ARHGAP31Q2M1Z3 1444 aa14.75□□□□□ -0.05
CCDC142-208ENST00000486335 MAP3K1Q13233 1512 aa14.75□□□□□ -0.05
CCDC142-208ENST00000486335 MAST1Q9Y2H9 1570 aa14.74□□□□□ -0.05
CCDC142-208ENST00000486335 IDI1Q13907 227 aa14.74□□□□□ -0.05
CCDC142-208ENST00000486335 TET3O43151 1660 aa14.74□□□□□ -0.05
CCDC142-208ENST00000486335 SLC26A8Q96RN1 970 aa14.73□□□□□ -0.05
CCDC142-208ENST00000486335 KANK4Q5T7N3 995 aaPredicted RBP14.72□□□□□ -0.05
CCDC142-208ENST00000486335 PROSER2Q86WR7 435 aaPredicted RBP14.71□□□□□ -0.05
CCDC142-208ENST00000486335 EID1Q9Y6B2 187 aa14.71□□□□□ -0.05
CCDC142-208ENST00000486335 CEP152O94986 1710 aa14.71□□□□□ -0.05
CCDC142-208ENST00000486335 UPF1Q92900 1129 aaKnown RBP eCLIP14.7□□□□□ -0.06
CCDC142-208ENST00000486335 ROBO1Q9Y6N7 1651 aa14.7□□□□□ -0.06
CCDC142-208ENST00000486335 EIF2AK4Q9P2K8 1649 aaKnown RBP14.7□□□□□ -0.06
CCDC142-208ENST00000486335 SLAIN2Q9P270 581 aa14.69□□□□□ -0.06
CCDC142-208ENST00000486335 SETD1AO15047 1707 aaKnown RBP14.69□□□□□ -0.06
CCDC142-208ENST00000486335 PIK3C2BO00750 1634 aa14.68□□□□□ -0.06
CCDC142-208ENST00000486335 LRRC9Q6ZRR7 1453 aa14.68□□□□□ -0.06
CCDC142-208ENST00000486335 PRDM15P57071 1507 aaPredicted RBP14.67□□□□□ -0.06
CCDC142-208ENST00000486335 DUOX2Q9NRD8 1548 aa14.66□□□□□ -0.06
CCDC142-208ENST00000486335 RRP7BPQ9NSQ0 103 aa14.66□□□□□ -0.06
CCDC142-208ENST00000486335 LRP6O75581 1613 aa14.66□□□□□ -0.06
CCDC142-208ENST00000486335 ABCC5O15440 1437 aa14.66□□□□□ -0.06
CCDC142-208ENST00000486335 JCADQ9P266 1359 aa14.65□□□□□ -0.06
CCDC142-208ENST00000486335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.65□□□□□ -0.06
CCDC142-208ENST00000486335 SRCAPQ6ZRS2 3230 aa14.65□□□□□ -0.06
CCDC142-208ENST00000486335 KIF15Q9NS87 1388 aa14.64□□□□□ -0.07
CCDC142-208ENST00000486335 NOS1P29475 1434 aa14.63□□□□□ -0.07
CCDC142-208ENST00000486335 EFCAB6Q5THR3 1501 aa14.62□□□□□ -0.07
CCDC142-208ENST00000486335 NWD1Q149M9 1564 aa14.62□□□□□ -0.07
CCDC142-208ENST00000486335 MYOM3Q5VTT5 1437 aa14.62□□□□□ -0.07
CCDC142-208ENST00000486335 ERBINQ96RT1 1412 aa14.61□□□□□ -0.07
CCDC142-208ENST00000486335 STAG3Q9UJ98 1225 aa14.61□□□□□ -0.07
CCDC142-208ENST00000486335 NKTRP30414 1462 aaKnown RBP14.61□□□□□ -0.07
CCDC142-208ENST00000486335 COL16A1Q07092 1604 aaPredicted RBP14.6□□□□□ -0.07
CCDC142-208ENST00000486335 LMTK2Q8IWU2 1503 aa14.6□□□□□ -0.07
CCDC142-208ENST00000486335 MSH6P52701 1360 aa14.6□□□□□ -0.07
CCDC142-208ENST00000486335 TRIM52Q96A61 297 aa14.59□□□□□ -0.07
CCDC142-208ENST00000486335 ZFYVE9O95405 1425 aa14.58□□□□□ -0.07
CCDC142-208ENST00000486335 KDM5AP29375 1690 aaKnown RBP14.58□□□□□ -0.08
CCDC142-208ENST00000486335 PHLPP1O60346 1717 aa14.58□□□□□ -0.08
CCDC142-208ENST00000486335 SPATA31A6Q5VVP1 1343 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms