RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 CNTLNQ9NXG0 1405 aa21.5■■□□□ 1.03
POLR2J3-204ENST00000486319 DAPK1P53355 1430 aa21.48■■□□□ 1.03
POLR2J3-204ENST00000486319 MAST1Q9Y2H9 1570 aa21.48■■□□□ 1.03
POLR2J3-204ENST00000486319 RRP7BPQ9NSQ0 103 aa21.47■■□□□ 1.03
POLR2J3-204ENST00000486319 NAIPQ13075 1403 aa21.47■■□□□ 1.03
POLR2J3-204ENST00000486319 CHIC2Q9UKJ5 165 aa21.46■■□□□ 1.03
POLR2J3-204ENST00000486319 CROCC2H7BZ55 1655 aa21.46■■□□□ 1.03
POLR2J3-204ENST00000486319 SHANK2Q9UPX8 1470 aa21.45■■□□□ 1.02
POLR2J3-204ENST00000486319 ZMYM3Q14202 1370 aa21.44■■□□□ 1.02
POLR2J3-204ENST00000486319 ROCK1Q13464 1354 aa21.43■■□□□ 1.02
POLR2J3-204ENST00000486319 KIF15Q9NS87 1388 aa21.43■■□□□ 1.02
POLR2J3-204ENST00000486319 ANKRD30AQ9BXX3 1397 aa21.41■■□□□ 1.02
POLR2J3-204ENST00000486319 WASHC2CQ9Y4E1 1318 aa21.41■■□□□ 1.02
POLR2J3-204ENST00000486319 LMTK3Q96Q04 1460 aa21.41■■□□□ 1.02
POLR2J3-204ENST00000486319 DUOX2Q9NRD8 1548 aa21.39■■□□□ 1.01
POLR2J3-204ENST00000486319 ACIN1Q9UKV3 1341 aaKnown RBP21.38■■□□□ 1.01
POLR2J3-204ENST00000486319 HSPA2P54652 639 aa21.37■■□□□ 1.01
POLR2J3-204ENST00000486319 NCOA1Q15788 1441 aa21.36■■□□□ 1.01
POLR2J3-204ENST00000486319 C3P01024 1663 aa21.36■■□□□ 1.01
POLR2J3-204ENST00000486319 CLTCQ00610 1675 aaKnown RBP21.35■■□□□ 1.01
POLR2J3-204ENST00000486319 UHRF1BP1Q6BDS2 1440 aa21.34■■□□□ 1.01
POLR2J3-204ENST00000486319 ADGRL2O95490 1459 aa21.34■■□□□ 1.01
POLR2J3-204ENST00000486319 MROH2AA6NES4 1674 aa21.34■■□□□ 1.01
POLR2J3-204ENST00000486319 NPATQ14207 1427 aa21.33■■□□□ 1.01
POLR2J3-204ENST00000486319 ERBINQ96RT1 1412 aa21.33■■□□□ 1.01
POLR2J3-204ENST00000486319 KDM5DQ9BY66 1539 aa21.32■■□□□ 1
POLR2J3-204ENST00000486319 SETD1BQ9UPS6 1966 aaKnown RBP21.31■■□□□ 1
POLR2J3-204ENST00000486319 EIF2AK4Q9P2K8 1649 aaKnown RBP21.31■■□□□ 1
POLR2J3-204ENST00000486319 FAM135AQ9P2D6 1515 aa21.3■■□□□ 1
POLR2J3-204ENST00000486319 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.29■■□□□ 1
POLR2J3-204ENST00000486319 PREX1Q8TCU6 1659 aa21.28■■□□□ 1
POLR2J3-204ENST00000486319 FBXO31Q5XUX0 539 aaPredicted RBP21.28■■□□□ 1
POLR2J3-204ENST00000486319 RNF17Q9BXT8 1623 aaKnown RBP21.27■■□□□ 1
POLR2J3-204ENST00000486319 ANKRD50Q9ULJ7 1429 aa21.24■□□□□ 0.99
POLR2J3-204ENST00000486319 PZPP20742 1482 aa21.24■□□□□ 0.99
POLR2J3-204ENST00000486319 ABCC3O15438 1527 aa21.24■□□□□ 0.99
POLR2J3-204ENST00000486319 KANK1Q14678 1352 aa21.23■□□□□ 0.99
POLR2J3-204ENST00000486319 MROH1Q8NDA8 1641 aa21.22■□□□□ 0.99
POLR2J3-204ENST00000486319 TNRQ92752 1358 aa21.21■□□□□ 0.99
POLR2J3-204ENST00000486319 PRDM15P57071 1507 aaPredicted RBP21.19■□□□□ 0.98
POLR2J3-204ENST00000486319 TRIM52Q96A61 297 aa21.19■□□□□ 0.98
POLR2J3-204ENST00000486319 ZC3H13Q5T200 1668 aaKnown RBP21.18■□□□□ 0.98
POLR2J3-204ENST00000486319 TIMELESSQ9UNS1 1208 aa21.16■□□□□ 0.98
POLR2J3-204ENST00000486319 DMRT2Q9Y5R5 561 aa21.16■□□□□ 0.98
POLR2J3-204ENST00000486319 DEPDC5O75140 1603 aa21.15■□□□□ 0.98
POLR2J3-204ENST00000486319 ARHGAP31Q2M1Z3 1444 aa21.13■□□□□ 0.97
POLR2J3-204ENST00000486319 MYO3AQ8NEV4 1616 aa21.13■□□□□ 0.97
POLR2J3-204ENST00000486319 A2ML1A8K2U0 1454 aa21.12■□□□□ 0.97
POLR2J3-204ENST00000486319 CEP170BQ9Y4F5 1589 aaPredicted RBP21.12■□□□□ 0.97
POLR2J3-204ENST00000486319 CEP152O94986 1710 aa21.12■□□□□ 0.97
POLR2J3-204ENST00000486319 MPHOSPH9Q99550 1183 aa21.12■□□□□ 0.97
POLR2J3-204ENST00000486319 ERVK-7P63135 1459 aa21.11■□□□□ 0.97
POLR2J3-204ENST00000486319 CAMSAP1Q5T5Y3 1602 aa21.11■□□□□ 0.97
POLR2J3-204ENST00000486319 SIN3AQ96ST3 1273 aa21.1■□□□□ 0.97
POLR2J3-204ENST00000486319 VWDEQ8N2E2 1590 aa21.1■□□□□ 0.97
POLR2J3-204ENST00000486319 LMTK2Q8IWU2 1503 aa21.1■□□□□ 0.97
POLR2J3-204ENST00000486319 NLRP1Q9C000 1473 aa21.1■□□□□ 0.97
POLR2J3-204ENST00000486319 SPATA31D1Q6ZQQ2 1576 aa21.09■□□□□ 0.97
POLR2J3-204ENST00000486319 THEMISQ8N1K5 641 aaPredicted RBP21.09■□□□□ 0.97
POLR2J3-204ENST00000486319 NCKAP5LQ9HCH0 1330 aa21.08■□□□□ 0.96
POLR2J3-204ENST00000486319 NEUROD1Q13562 356 aa21.08■□□□□ 0.96
POLR2J3-204ENST00000486319 ZNF142P52746 1687 aaPredicted RBP21.07■□□□□ 0.96
POLR2J3-204ENST00000486319 PKD2Q13563 968 aa21.07■□□□□ 0.96
POLR2J3-204ENST00000486319 NUP155O75694 1391 aa21.06■□□□□ 0.96
POLR2J3-204ENST00000486319 STRCQ7RTU9 1775 aa21.06■□□□□ 0.96
POLR2J3-204ENST00000486319 PLA2R1Q13018 1463 aa21.05■□□□□ 0.96
POLR2J3-204ENST00000486319 ZNF316A6NFI3 1004 aaPredicted RBP21.04■□□□□ 0.96
POLR2J3-204ENST00000486319 UGGT1Q9NYU2 1555 aa21.03■□□□□ 0.96
POLR2J3-204ENST00000486319 PTPRTO14522 1441 aa21.03■□□□□ 0.96
POLR2J3-204ENST00000486319 SLC4A1APQ9BWU0 796 aaKnown RBP21.03■□□□□ 0.96
POLR2J3-204ENST00000486319 CFAP65Q6ZU64 1925 aaKnown RBP21.02■□□□□ 0.96
POLR2J3-204ENST00000486319 EFCAB6Q5THR3 1501 aa21.02■□□□□ 0.96
POLR2J3-204ENST00000486319 UNC13BO14795 1591 aa21.02■□□□□ 0.95
POLR2J3-204ENST00000486319 ANKLE2Q86XL3 938 aa21.01■□□□□ 0.95
POLR2J3-204ENST00000486319 TONSLQ96HA7 1378 aa21.01■□□□□ 0.95
POLR2J3-204ENST00000486319 RPRD2Q5VT52 1461 aaKnown RBP20.99■□□□□ 0.95
POLR2J3-204ENST00000486319 IDI1Q13907 227 aa20.99■□□□□ 0.95
POLR2J3-204ENST00000486319 STAG3Q9UJ98 1225 aa20.99■□□□□ 0.95
POLR2J3-204ENST00000486319 SLC52A1Q9NWF4 448 aa20.98■□□□□ 0.95
POLR2J3-204ENST00000486319 NOS1P29475 1434 aa20.98■□□□□ 0.95
POLR2J3-204ENST00000486319 ANKRD30BQ9BXX2 1392 aa20.97■□□□□ 0.95
POLR2J3-204ENST00000486319 TET3O43151 1660 aa20.95■□□□□ 0.94
POLR2J3-204ENST00000486319 PPP1R15AO75807 674 aaPredicted RBP20.94■□□□□ 0.94
POLR2J3-204ENST00000486319 IQGAP3Q86VI3 1631 aa20.93■□□□□ 0.94
POLR2J3-204ENST00000486319 FOXD1Q16676 465 aa20.92■□□□□ 0.94
POLR2J3-204ENST00000486319 SYNMO15061 1565 aa20.91■□□□□ 0.94
POLR2J3-204ENST00000486319 CERKQ8TCT0 537 aa20.91■□□□□ 0.94
POLR2J3-204ENST00000486319 TXNDC2Q86VQ3 553 aa20.9■□□□□ 0.94
POLR2J3-204ENST00000486319 EID1Q9Y6B2 187 aa20.9■□□□□ 0.94
POLR2J3-204ENST00000486319 UBR1Q8IWV7 1749 aa20.88■□□□□ 0.93
POLR2J3-204ENST00000486319 LTKP29376 864 aa20.88■□□□□ 0.93
POLR2J3-204ENST00000486319 PIK3C2BO00750 1634 aa20.87■□□□□ 0.93
POLR2J3-204ENST00000486319 NPHP4O75161 1426 aaPredicted RBP20.87■□□□□ 0.93
POLR2J3-204ENST00000486319 TMEM2Q9UHN6 1383 aa20.87■□□□□ 0.93
POLR2J3-204ENST00000486319 ZNF335Q9H4Z2 1342 aaPredicted RBP20.87■□□□□ 0.93
POLR2J3-204ENST00000486319 ILDR1Q86SU0 546 aaPredicted RBP20.87■□□□□ 0.93
POLR2J3-204ENST00000486319 E9PCH4 1651 aa20.86■□□□□ 0.93
POLR2J3-204ENST00000486319 CHGAP10645 457 aaKnown RBP20.86■□□□□ 0.93
POLR2J3-204ENST00000486319 MED14O60244 1454 aa20.86■□□□□ 0.93
POLR2J3-204ENST00000486319 NEURL4Q96JN8 1562 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms