RNA–Protein interactions for RNA: ENST00000486268.5

ERGIC3-215, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-215ENST00000486268 DHX29Q7Z478 1369 aaKnown RBP17.14■□□□□ 0.33
ERGIC3-215ENST00000486268 DUOX2Q9NRD8 1548 aa17.13■□□□□ 0.33
ERGIC3-215ENST00000486268 KIF15Q9NS87 1388 aa17.13■□□□□ 0.33
ERGIC3-215ENST00000486268 TRIM52Q96A61 297 aa17.12■□□□□ 0.33
ERGIC3-215ENST00000486268 ADAMTSL3P82987 1691 aa17.12■□□□□ 0.33
ERGIC3-215ENST00000486268 ANKRD50Q9ULJ7 1429 aa17.12■□□□□ 0.33
ERGIC3-215ENST00000486268 EIF2AK4Q9P2K8 1649 aaKnown RBP17.1■□□□□ 0.33
ERGIC3-215ENST00000486268 MPHOSPH9Q99550 1183 aa17.09■□□□□ 0.33
ERGIC3-215ENST00000486268 ARID4BQ4LE39 1312 aaPredicted RBP17.09■□□□□ 0.33
ERGIC3-215ENST00000486268 MADDQ8WXG6 1647 aa17.08■□□□□ 0.32
ERGIC3-215ENST00000486268 RNF17Q9BXT8 1623 aaKnown RBP17.08■□□□□ 0.32
ERGIC3-215ENST00000486268 FER1L4A9Z1Z3 1794 aa17.07■□□□□ 0.32
ERGIC3-215ENST00000486268 ERBINQ96RT1 1412 aa17.07■□□□□ 0.32
ERGIC3-215ENST00000486268 MROH1Q8NDA8 1641 aa17.07■□□□□ 0.32
ERGIC3-215ENST00000486268 MLECQ14165 292 aa17.06■□□□□ 0.32
ERGIC3-215ENST00000486268 KDM5DQ9BY66 1539 aa17.06■□□□□ 0.32
ERGIC3-215ENST00000486268 ZNF316A6NFI3 1004 aaPredicted RBP17.05■□□□□ 0.32
ERGIC3-215ENST00000486268 DEPDC5O75140 1603 aa17.05■□□□□ 0.32
ERGIC3-215ENST00000486268 RIMS1Q86UR5 1692 aaKnown RBP17.04■□□□□ 0.32
ERGIC3-215ENST00000486268 KIF3BO15066 747 aa17.03■□□□□ 0.32
ERGIC3-215ENST00000486268 SIN3AQ96ST3 1273 aa17.03■□□□□ 0.32
ERGIC3-215ENST00000486268 PZPP20742 1482 aa17.02■□□□□ 0.32
ERGIC3-215ENST00000486268 SLC4A1APQ9BWU0 796 aaKnown RBP17.02■□□□□ 0.32
ERGIC3-215ENST00000486268 TONSLQ96HA7 1378 aa17.02■□□□□ 0.31
ERGIC3-215ENST00000486268 NEUROD1Q13562 356 aa17.01■□□□□ 0.31
ERGIC3-215ENST00000486268 PRDM15P57071 1507 aaPredicted RBP17.01■□□□□ 0.31
ERGIC3-215ENST00000486268 CLTCQ00610 1675 aaKnown RBP17.01■□□□□ 0.31
ERGIC3-215ENST00000486268 ANKRD30BQ9BXX2 1392 aa17■□□□□ 0.31
ERGIC3-215ENST00000486268 UNC13BO14795 1591 aa16.99■□□□□ 0.31
ERGIC3-215ENST00000486268 GGT6Q6P531 493 aa16.99■□□□□ 0.31
ERGIC3-215ENST00000486268 CEP152O94986 1710 aa16.99■□□□□ 0.31
ERGIC3-215ENST00000486268 PPP1R15AO75807 674 aaPredicted RBP16.97■□□□□ 0.31
ERGIC3-215ENST00000486268 NUP155O75694 1391 aa16.97■□□□□ 0.31
ERGIC3-215ENST00000486268 VWDEQ8N2E2 1590 aa16.97■□□□□ 0.31
ERGIC3-215ENST00000486268 MROH2AA6NES4 1674 aa16.97■□□□□ 0.31
ERGIC3-215ENST00000486268 C3P01024 1663 aa16.96■□□□□ 0.31
ERGIC3-215ENST00000486268 ZC3H13Q5T200 1668 aaKnown RBP16.96■□□□□ 0.31
ERGIC3-215ENST00000486268 ABCC3O15438 1527 aa16.96■□□□□ 0.3
ERGIC3-215ENST00000486268 FAM135AQ9P2D6 1515 aa16.96■□□□□ 0.3
ERGIC3-215ENST00000486268 PTPRMP28827 1452 aa16.95■□□□□ 0.3
ERGIC3-215ENST00000486268 RPRD2Q5VT52 1461 aaKnown RBP16.93■□□□□ 0.3
ERGIC3-215ENST00000486268 PPP6R1Q9UPN7 881 aa16.93■□□□□ 0.3
ERGIC3-215ENST00000486268 CNTLNQ9NXG0 1405 aa16.93■□□□□ 0.3
ERGIC3-215ENST00000486268 CAMSAP1Q5T5Y3 1602 aa16.92■□□□□ 0.3
ERGIC3-215ENST00000486268 IQGAP3Q86VI3 1631 aa16.92■□□□□ 0.3
ERGIC3-215ENST00000486268 LMTK2Q8IWU2 1503 aa16.91■□□□□ 0.3
ERGIC3-215ENST00000486268 PKD2Q13563 968 aa16.9■□□□□ 0.3
ERGIC3-215ENST00000486268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.9■□□□□ 0.32e-10■■□□□ 13.5
ERGIC3-215ENST00000486268 ZMYM3Q14202 1370 aa16.89■□□□□ 0.29
ERGIC3-215ENST00000486268 CEBPAP49715 358 aaPredicted RBP16.88■□□□□ 0.29
ERGIC3-215ENST00000486268 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
ERGIC3-215ENST00000486268 CFAP65Q6ZU64 1925 aaKnown RBP16.88■□□□□ 0.29
ERGIC3-215ENST00000486268 TET3O43151 1660 aa16.88■□□□□ 0.29
ERGIC3-215ENST00000486268 DIEXFQ68CQ4 756 aaKnown RBP16.87■□□□□ 0.29
ERGIC3-215ENST00000486268 EFCAB6Q5THR3 1501 aa16.86■□□□□ 0.29
ERGIC3-215ENST00000486268 ESF1Q9H501 851 aaKnown RBP16.86■□□□□ 0.29
ERGIC3-215ENST00000486268 KANK1Q14678 1352 aa16.86■□□□□ 0.29
ERGIC3-215ENST00000486268 FOXD1Q16676 465 aa16.85■□□□□ 0.29
ERGIC3-215ENST00000486268 PLPPR3Q6T4P5 718 aa16.84■□□□□ 0.29
ERGIC3-215ENST00000486268 E9PCH4 1651 aa16.84■□□□□ 0.29
ERGIC3-215ENST00000486268 NPATQ14207 1427 aa16.83■□□□□ 0.28
ERGIC3-215ENST00000486268 ARHGAP31Q2M1Z3 1444 aa16.83■□□□□ 0.28
ERGIC3-215ENST00000486268 PREX1Q8TCU6 1659 aa16.83■□□□□ 0.28
ERGIC3-215ENST00000486268 SETD1BQ9UPS6 1966 aaKnown RBP16.81■□□□□ 0.28
ERGIC3-215ENST00000486268 FBXO41Q8TF61 875 aa16.81■□□□□ 0.28
ERGIC3-215ENST00000486268 L3MBTL2Q969R5 705 aa16.81■□□□□ 0.28
ERGIC3-215ENST00000486268 SPATA31D1Q6ZQQ2 1576 aa16.81■□□□□ 0.28
ERGIC3-215ENST00000486268 FBXO31Q5XUX0 539 aaPredicted RBP16.8■□□□□ 0.28
ERGIC3-215ENST00000486268 ERVK-7P63135 1459 aa16.8■□□□□ 0.28
ERGIC3-215ENST00000486268 MYO3AQ8NEV4 1616 aa16.78■□□□□ 0.28
ERGIC3-215ENST00000486268 SYNMO15061 1565 aa16.77■□□□□ 0.27
ERGIC3-215ENST00000486268 CCDC144AA2RUR9 1427 aa16.75■□□□□ 0.27
ERGIC3-215ENST00000486268 NOS1P29475 1434 aa16.75■□□□□ 0.27
ERGIC3-215ENST00000486268 SPHKAPQ2M3C7 1700 aa16.75■□□□□ 0.27
ERGIC3-215ENST00000486268 TNRQ92752 1358 aa16.74■□□□□ 0.27
ERGIC3-215ENST00000486268 ZNF142P52746 1687 aaPredicted RBP16.73■□□□□ 0.27
ERGIC3-215ENST00000486268 LMTK3Q96Q04 1460 aa16.72■□□□□ 0.27
ERGIC3-215ENST00000486268 UHRF1BP1Q6BDS2 1440 aa16.71■□□□□ 0.27
ERGIC3-215ENST00000486268 CEP170BQ9Y4F5 1589 aaPredicted RBP16.71■□□□□ 0.27
ERGIC3-215ENST00000486268 PIK3C2BO00750 1634 aa16.7■□□□□ 0.26
ERGIC3-215ENST00000486268 UGGT1Q9NYU2 1555 aa16.7■□□□□ 0.26
ERGIC3-215ENST00000486268 PLA2R1Q13018 1463 aa16.7■□□□□ 0.26
ERGIC3-215ENST00000486268 PTPRTO14522 1441 aa16.7■□□□□ 0.26
ERGIC3-215ENST00000486268 A2ML1A8K2U0 1454 aa16.67■□□□□ 0.26
ERGIC3-215ENST00000486268 NLRP1Q9C000 1473 aa16.67■□□□□ 0.26
ERGIC3-215ENST00000486268 TRPM2O94759 1503 aa16.67■□□□□ 0.26
ERGIC3-215ENST00000486268 UBR1Q8IWV7 1749 aa16.67■□□□□ 0.26
ERGIC3-215ENST00000486268 MYO5BQ9ULV0 1848 aa16.66■□□□□ 0.26
ERGIC3-215ENST00000486268 EIF4G2P78344 907 aaKnown RBP eCLIP16.66■□□□□ 0.26
ERGIC3-215ENST00000486268 NEURL4Q96JN8 1562 aa16.66■□□□□ 0.26
ERGIC3-215ENST00000486268 STAC3Q96MF2 364 aa16.66■□□□□ 0.26
ERGIC3-215ENST00000486268 CLTCL1P53675 1640 aa16.66■□□□□ 0.26
ERGIC3-215ENST00000486268 NBPF8Q3BBV2 869 aa16.64■□□□□ 0.25
ERGIC3-215ENST00000486268 KDM5AP29375 1690 aaKnown RBP16.63■□□□□ 0.25
ERGIC3-215ENST00000486268 IDI1Q13907 227 aa16.63■□□□□ 0.25
ERGIC3-215ENST00000486268 RALGAPBQ86X10 1494 aa16.62■□□□□ 0.25
ERGIC3-215ENST00000486268 ADGRB3O60242 1522 aa16.62■□□□□ 0.25
ERGIC3-215ENST00000486268 TMEM131LA2VDJ0 1609 aa16.62■□□□□ 0.25
ERGIC3-215ENST00000486268 HSPA2P54652 639 aa16.61■□□□□ 0.25
ERGIC3-215ENST00000486268 SLC52A1Q9NWF4 448 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms