RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 TNRQ92752 1358 aa16.31■□□□□ 0.2
SND1-213ENST00000486037 NPHP4O75161 1426 aaPredicted RBP16.3■□□□□ 0.2
SND1-213ENST00000486037 GPATCH8Q9UKJ3 1502 aaKnown RBP16.29■□□□□ 0.2
SND1-213ENST00000486037 RNF17Q9BXT8 1623 aaKnown RBP16.29■□□□□ 0.2
SND1-213ENST00000486037 MED14O60244 1454 aa16.29■□□□□ 0.2
SND1-213ENST00000486037 SETD1AO15047 1707 aaKnown RBP16.28■□□□□ 0.2
SND1-213ENST00000486037 ANKLE2Q86XL3 938 aa16.28■□□□□ 0.2
SND1-213ENST00000486037 UBTFP17480 764 aaKnown RBP16.27■□□□□ 0.2
SND1-213ENST00000486037 DEPDC5O75140 1603 aa16.26■□□□□ 0.19
SND1-213ENST00000486037 IQGAP1P46940 1657 aa16.25■□□□□ 0.19
SND1-213ENST00000486037 KIAA1107Q9UPP5 1409 aa16.25■□□□□ 0.19
SND1-213ENST00000486037 ADGBQ8N7X0 1667 aa16.24■□□□□ 0.19
SND1-213ENST00000486037 PZPP20742 1482 aa16.24■□□□□ 0.19
SND1-213ENST00000486037 CCDC18Q5T9S5 1454 aa16.24■□□□□ 0.19
SND1-213ENST00000486037 SYNMO15061 1565 aa16.23■□□□□ 0.19
SND1-213ENST00000486037 CASKIN1Q8WXD9 1431 aa16.23■□□□□ 0.19
SND1-213ENST00000486037 UGGT1Q9NYU2 1555 aa16.22■□□□□ 0.19
SND1-213ENST00000486037 SRCAPQ6ZRS2 3230 aa16.21■□□□□ 0.19
SND1-213ENST00000486037 MIA2Q96PC5 1412 aa16.2■□□□□ 0.18
SND1-213ENST00000486037 THEMISQ8N1K5 641 aaPredicted RBP16.2■□□□□ 0.18
SND1-213ENST00000486037 ZNF644Q9H582 1327 aaPredicted RBP16.19■□□□□ 0.18
SND1-213ENST00000486037 XIRP1Q702N8 1843 aaKnown RBP16.19■□□□□ 0.18
SND1-213ENST00000486037 CFDP1Q9UEE9 299 aaPredicted RBP16.19■□□□□ 0.18
SND1-213ENST00000486037 KDM5DQ9BY66 1539 aa16.19■□□□□ 0.18
SND1-213ENST00000486037 FAM135AQ9P2D6 1515 aa16.19■□□□□ 0.18
SND1-213ENST00000486037 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
SND1-213ENST00000486037 PLEKHH2Q8IVE3 1493 aa16.18■□□□□ 0.18
SND1-213ENST00000486037 NLRP1Q9C000 1473 aa16.18■□□□□ 0.18
SND1-213ENST00000486037 DHX29Q7Z478 1369 aaKnown RBP16.18■□□□□ 0.18
SND1-213ENST00000486037 MBD5Q9P267 1494 aa16.16■□□□□ 0.18
SND1-213ENST00000486037 KIF3BO15066 747 aa16.16■□□□□ 0.18
SND1-213ENST00000486037 CCNB3Q8WWL7 1395 aa16.13■□□□□ 0.17
SND1-213ENST00000486037 WASHC2CQ9Y4E1 1318 aa16.13■□□□□ 0.17
SND1-213ENST00000486037 FAM135BQ49AJ0 1406 aa16.12■□□□□ 0.17
SND1-213ENST00000486037 RTEL1-TNFRSF6BF6WH68 1400 aa16.11■□□□□ 0.17
SND1-213ENST00000486037 FYCO1Q9BQS8 1478 aa16.11■□□□□ 0.17
SND1-213ENST00000486037 UPF1Q92900 1129 aaKnown RBP eCLIP16.1■□□□□ 0.17
SND1-213ENST00000486037 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
SND1-213ENST00000486037 ROBO1Q9Y6N7 1651 aa16.08■□□□□ 0.17
SND1-213ENST00000486037 LTKP29376 864 aa16.08■□□□□ 0.16
SND1-213ENST00000486037 NCOA2Q15596 1464 aa16.07■□□□□ 0.16
SND1-213ENST00000486037 UBR1Q8IWV7 1749 aa16.06■□□□□ 0.16
SND1-213ENST00000486037 SCAF11Q99590 1463 aaKnown RBP16.06■□□□□ 0.16
SND1-213ENST00000486037 ERVK-7P63135 1459 aa16.05■□□□□ 0.16
SND1-213ENST00000486037 RBM33Q96EV2 1170 aaKnown RBP16.05■□□□□ 0.16
SND1-213ENST00000486037 ABCC3O15438 1527 aa16.04■□□□□ 0.16
SND1-213ENST00000486037 MAP3K1Q13233 1512 aa16.04■□□□□ 0.16
SND1-213ENST00000486037 TMEM94Q12767 1356 aa16.03■□□□□ 0.16
SND1-213ENST00000486037 ARHGAP23Q9P227 1491 aa16.03■□□□□ 0.16
SND1-213ENST00000486037 CCDC141Q6ZP82 1450 aa16.01■□□□□ 0.15
SND1-213ENST00000486037 LRP6O75581 1613 aa16.01■□□□□ 0.15
SND1-213ENST00000486037 MTUS2Q5JR59 1369 aa16■□□□□ 0.15
SND1-213ENST00000486037 SLIT1O75093 1534 aa16■□□□□ 0.15
SND1-213ENST00000486037 TXNDC2Q86VQ3 553 aa16■□□□□ 0.15
SND1-213ENST00000486037 TRIM52Q96A61 297 aa16■□□□□ 0.15
SND1-213ENST00000486037 CFAP65Q6ZU64 1925 aaKnown RBP16■□□□□ 0.15
SND1-213ENST00000486037 PHLPP1O60346 1717 aa15.98■□□□□ 0.15
SND1-213ENST00000486037 MROH1Q8NDA8 1641 aa15.97■□□□□ 0.15
SND1-213ENST00000486037 CAMSAP2Q08AD1 1489 aa15.97■□□□□ 0.15
SND1-213ENST00000486037 JCADQ9P266 1359 aa15.96■□□□□ 0.15
SND1-213ENST00000486037 CEP152O94986 1710 aa15.96■□□□□ 0.15
SND1-213ENST00000486037 COL16A1Q07092 1604 aaPredicted RBP15.94■□□□□ 0.14
SND1-213ENST00000486037 LRRC9Q6ZRR7 1453 aa15.93■□□□□ 0.14
SND1-213ENST00000486037 PROSER2Q86WR7 435 aaPredicted RBP15.93■□□□□ 0.14
SND1-213ENST00000486037 KCNA6P17658 529 aa15.92■□□□□ 0.14
SND1-213ENST00000486037 EHBP1L1Q8N3D4 1523 aa15.92■□□□□ 0.14
SND1-213ENST00000486037 CEP162Q5TB80 1403 aa15.92■□□□□ 0.14
SND1-213ENST00000486037 PRDM15P57071 1507 aaPredicted RBP15.91■□□□□ 0.14
SND1-213ENST00000486037 SLC26A8Q96RN1 970 aa15.91■□□□□ 0.14
SND1-213ENST00000486037 PIK3C2BO00750 1634 aa15.9■□□□□ 0.14
SND1-213ENST00000486037 TMEM2Q9UHN6 1383 aa15.9■□□□□ 0.14
SND1-213ENST00000486037 TET3O43151 1660 aa15.9■□□□□ 0.14
SND1-213ENST00000486037 SLAIN2Q9P270 581 aa15.89■□□□□ 0.13
SND1-213ENST00000486037 EID1Q9Y6B2 187 aa15.89■□□□□ 0.13
SND1-213ENST00000486037 ARHGEF5Q12774 1597 aa15.88■□□□□ 0.13
SND1-213ENST00000486037 ZNF772Q68DY9 489 aaPredicted RBP15.88■□□□□ 0.13
SND1-213ENST00000486037 NWD1Q149M9 1564 aa15.87■□□□□ 0.13
SND1-213ENST00000486037 MEX3CQ5U5Q3 659 aaKnown RBP15.87■□□□□ 0.13
SND1-213ENST00000486037 EIF2AK4Q9P2K8 1649 aaKnown RBP15.86■□□□□ 0.13
SND1-213ENST00000486037 RXRBP28702 533 aa15.86■□□□□ 0.13
SND1-213ENST00000486037 MSH6P52701 1360 aa15.86■□□□□ 0.13
SND1-213ENST00000486037 NKTRP30414 1462 aaKnown RBP15.85■□□□□ 0.13
SND1-213ENST00000486037 RSPH4AQ5TD94 716 aa15.85■□□□□ 0.13
SND1-213ENST00000486037 SPATA31A6Q5VVP1 1343 aa15.85■□□□□ 0.13
SND1-213ENST00000486037 TSPY4P0CV99 314 aa15.84■□□□□ 0.13
SND1-213ENST00000486037 TSPY10P0CW01 314 aa15.84■□□□□ 0.13
SND1-213ENST00000486037 ARHGAP31Q2M1Z3 1444 aa15.83■□□□□ 0.12
SND1-213ENST00000486037 FGD6Q6ZV73 1430 aa15.83■□□□□ 0.12
SND1-213ENST00000486037 CDK12Q9NYV4 1490 aaPredicted RBP15.83■□□□□ 0.12
SND1-213ENST00000486037 MAST1Q9Y2H9 1570 aa15.83■□□□□ 0.12
SND1-213ENST00000486037 RGS12O14924 1447 aa15.82■□□□□ 0.12
SND1-213ENST00000486037 EFCAB6Q5THR3 1501 aa15.82■□□□□ 0.12
SND1-213ENST00000486037 KDM5AP29375 1690 aaKnown RBP15.82■□□□□ 0.12
SND1-213ENST00000486037 SHPRHQ149N8 1683 aa15.82■□□□□ 0.12
SND1-213ENST00000486037 IDI1Q13907 227 aa15.8■□□□□ 0.12
SND1-213ENST00000486037 AHDC1Q5TGY3 1603 aaPredicted RBP15.79■□□□□ 0.12
SND1-213ENST00000486037 STAG3Q9UJ98 1225 aa15.79■□□□□ 0.12
SND1-213ENST00000486037 DIP2AQ14689 1571 aa15.79■□□□□ 0.12
SND1-213ENST00000486037 AFF2P51816 1311 aa15.78■□□□□ 0.12
SND1-213ENST00000486037 NUTM2BA6NNL0 878 aaPredicted RBP15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms