RNA–Protein interactions for RNA: ENST00000485921.5

ABCF3-216, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-216ENST00000485921 RNF17Q9BXT8 1623 aaKnown RBP35.64■■■■□ 3.3
ABCF3-216ENST00000485921 PTPRMP28827 1452 aa35.6■■■■□ 3.29
ABCF3-216ENST00000485921 NAIPQ13075 1403 aa35.6■■■■□ 3.29
ABCF3-216ENST00000485921 CNTLNQ9NXG0 1405 aa35.59■■■■□ 3.29
ABCF3-216ENST00000485921 HFM1A2PYH4 1435 aa35.58■■■■□ 3.29
ABCF3-216ENST00000485921 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.58■■■■□ 3.29
ABCF3-216ENST00000485921 WASHC2CQ9Y4E1 1318 aa35.57■■■■□ 3.28
ABCF3-216ENST00000485921 MROH1Q8NDA8 1641 aa35.56■■■■□ 3.28
ABCF3-216ENST00000485921 AEBP2Q6ZN18 517 aaPredicted RBP35.54■■■■□ 3.28
ABCF3-216ENST00000485921 PLPPR3Q6T4P5 718 aa35.53■■■■□ 3.28
ABCF3-216ENST00000485921 DEPDC5O75140 1603 aa35.53■■■■□ 3.28
ABCF3-216ENST00000485921 CLTCQ00610 1675 aaKnown RBP35.52■■■■□ 3.28
ABCF3-216ENST00000485921 GCC2Q8IWJ2 1684 aa35.52■■■■□ 3.28
ABCF3-216ENST00000485921 PRDM15P57071 1507 aaPredicted RBP35.52■■■■□ 3.28
ABCF3-216ENST00000485921 KDM5DQ9BY66 1539 aa35.52■■■■□ 3.28
ABCF3-216ENST00000485921 FAM135AQ9P2D6 1515 aa35.52■■■■□ 3.28
ABCF3-216ENST00000485921 KANK1Q14678 1352 aa35.51■■■■□ 3.27
ABCF3-216ENST00000485921 CEBPAP49715 358 aaPredicted RBP35.5■■■■□ 3.27
ABCF3-216ENST00000485921 ZMYM3Q14202 1370 aa35.5■■■■□ 3.27
ABCF3-216ENST00000485921 ABCC3O15438 1527 aa35.47■■■■□ 3.27
ABCF3-216ENST00000485921 MROH2AA6NES4 1674 aa35.46■■■■□ 3.27
ABCF3-216ENST00000485921 ZC3H13Q5T200 1668 aaKnown RBP35.43■■■■□ 3.26
ABCF3-216ENST00000485921 UNC13BO14795 1591 aa35.42■■■■□ 3.26
ABCF3-216ENST00000485921 C3P01024 1663 aa35.42■■■■□ 3.26
ABCF3-216ENST00000485921 VWDEQ8N2E2 1590 aa35.41■■■■□ 3.26
ABCF3-216ENST00000485921 CEP152O94986 1710 aa35.4■■■■□ 3.26
ABCF3-216ENST00000485921 TRIM26Q12899 539 aaPredicted RBP35.39■■■■□ 3.26
ABCF3-216ENST00000485921 SETD5Q9C0A6 1442 aa35.39■■■■□ 3.26
ABCF3-216ENST00000485921 NUP155O75694 1391 aa35.38■■■■□ 3.25
ABCF3-216ENST00000485921 LMTK2Q8IWU2 1503 aa35.35■■■■□ 3.25
ABCF3-216ENST00000485921 CAMSAP1Q5T5Y3 1602 aa35.32■■■■□ 3.25
ABCF3-216ENST00000485921 PZPP20742 1482 aa35.32■■■■□ 3.24
ABCF3-216ENST00000485921 TRIM52Q96A61 297 aa35.31■■■■□ 3.24
ABCF3-216ENST00000485921 FBXO31Q5XUX0 539 aaPredicted RBP35.3■■■■□ 3.24
ABCF3-216ENST00000485921 IQGAP3Q86VI3 1631 aa35.28■■■■□ 3.24
ABCF3-216ENST00000485921 NPATQ14207 1427 aa35.28■■■■□ 3.24
ABCF3-216ENST00000485921 ARHGAP31Q2M1Z3 1444 aa35.28■■■■□ 3.24
ABCF3-216ENST00000485921 RAB3GAP2Q9H2M9 1393 aa35.27■■■■□ 3.24
ABCF3-216ENST00000485921 EFCAB6Q5THR3 1501 aa35.23■■■■□ 3.23
ABCF3-216ENST00000485921 TET3O43151 1660 aa35.23■■■■□ 3.23
ABCF3-216ENST00000485921 ACIN1Q9UKV3 1341 aaKnown RBP35.21■■■■□ 3.23
ABCF3-216ENST00000485921 SETD1BQ9UPS6 1966 aaKnown RBP35.2■■■■□ 3.22
ABCF3-216ENST00000485921 ERVK-7P63135 1459 aa35.17■■■■□ 3.22
ABCF3-216ENST00000485921 TNRQ92752 1358 aa35.17■■■■□ 3.22
ABCF3-216ENST00000485921 CFAP65Q6ZU64 1925 aaKnown RBP35.16■■■■□ 3.22
ABCF3-216ENST00000485921 HRCP23327 699 aa35.15■■■■□ 3.22
ABCF3-216ENST00000485921 RPRD2Q5VT52 1461 aaKnown RBP35.15■■■■□ 3.22
ABCF3-216ENST00000485921 SPATA31D1Q6ZQQ2 1576 aa35.14■■■■□ 3.22
ABCF3-216ENST00000485921 SLC4A1APQ9BWU0 796 aaKnown RBP35.14■■■■□ 3.22
ABCF3-216ENST00000485921 PREX1Q8TCU6 1659 aa35.12■■■■□ 3.21
ABCF3-216ENST00000485921 UHRF1BP1Q6BDS2 1440 aa35.12■■■■□ 3.21
ABCF3-216ENST00000485921 E9PCH4 1651 aa35.11■■■■□ 3.21
ABCF3-216ENST00000485921 LMTK3Q96Q04 1460 aa35.08■■■■□ 3.21
ABCF3-216ENST00000485921 PKD2Q13563 968 aa35.07■■■■□ 3.2
ABCF3-216ENST00000485921 MPHOSPH9Q99550 1183 aa35.07■■■■□ 3.2
ABCF3-216ENST00000485921 NOS1P29475 1434 aa35.06■■■■□ 3.2
ABCF3-216ENST00000485921 MYO3AQ8NEV4 1616 aa35.05■■■■□ 3.2
ABCF3-216ENST00000485921 NLRP1Q9C000 1473 aa35.02■■■■□ 3.2
ABCF3-216ENST00000485921 SYNMO15061 1565 aa35■■■■□ 3.19
ABCF3-216ENST00000485921 A2ML1A8K2U0 1454 aa34.98■■■■□ 3.19
ABCF3-216ENST00000485921 CEP170BQ9Y4F5 1589 aaPredicted RBP34.98■■■■□ 3.19
ABCF3-216ENST00000485921 HSPA2P54652 639 aa34.97■■■■□ 3.19
ABCF3-216ENST00000485921 IDI1Q13907 227 aa34.95■■■■□ 3.19
ABCF3-216ENST00000485921 FOXD1Q16676 465 aa34.95■■■■□ 3.19
ABCF3-216ENST00000485921 PCGF6Q9BYE7 350 aa34.95■■■■□ 3.19
ABCF3-216ENST00000485921 SLC52A1Q9NWF4 448 aa34.95■■■■□ 3.19
ABCF3-216ENST00000485921 ZNF142P52746 1687 aaPredicted RBP34.95■■■■□ 3.18
ABCF3-216ENST00000485921 PTPRTO14522 1441 aa34.94■■■■□ 3.18
ABCF3-216ENST00000485921 SPHKAPQ2M3C7 1700 aa34.89■■■■□ 3.18
ABCF3-216ENST00000485921 UGGT1Q9NYU2 1555 aa34.88■■■■□ 3.17
ABCF3-216ENST00000485921 PLA2R1Q13018 1463 aa34.86■■■■□ 3.17
ABCF3-216ENST00000485921 THEMISQ8N1K5 641 aaPredicted RBP34.86■■■■□ 3.17
ABCF3-216ENST00000485921 STAG3Q9UJ98 1225 aa34.86■■■■□ 3.17
ABCF3-216ENST00000485921 PIK3C2BO00750 1634 aa34.85■■■■□ 3.17
ABCF3-216ENST00000485921 TRPM2O94759 1503 aa34.84■■■■□ 3.17
ABCF3-216ENST00000485921 UBR1Q8IWV7 1749 aa34.8■■■■□ 3.16
ABCF3-216ENST00000485921 CHGAP10645 457 aaKnown RBP34.78■■■■□ 3.16
ABCF3-216ENST00000485921 ADGRB3O60242 1522 aa34.76■■■■□ 3.16
ABCF3-216ENST00000485921 CLTCL1P53675 1640 aa34.75■■■■□ 3.15
ABCF3-216ENST00000485921 KDM5AP29375 1690 aaKnown RBP34.74■■■■□ 3.15
ABCF3-216ENST00000485921 TMEM131LA2VDJ0 1609 aa34.71■■■■□ 3.15
ABCF3-216ENST00000485921 CCDC144AA2RUR9 1427 aa34.71■■■■□ 3.15
ABCF3-216ENST00000485921 ANKRD30BQ9BXX2 1392 aa34.7■■■■□ 3.15
ABCF3-216ENST00000485921 NCKAP5LQ9HCH0 1330 aa34.69■■■■□ 3.14
ABCF3-216ENST00000485921 ANKLE2Q86XL3 938 aa34.68■■■■□ 3.14
ABCF3-216ENST00000485921 TMEM2Q9UHN6 1383 aa34.68■■■■□ 3.14
ABCF3-216ENST00000485921 STRCQ7RTU9 1775 aa34.66■■■■□ 3.14
ABCF3-216ENST00000485921 SLIT1O75093 1534 aa34.65■■■■□ 3.14
ABCF3-216ENST00000485921 ARHGAP23Q9P227 1491 aa34.65■■■■□ 3.14
ABCF3-216ENST00000485921 MYO5BQ9ULV0 1848 aa34.65■■■■□ 3.14
ABCF3-216ENST00000485921 DHX57Q6P158 1386 aaKnown RBP34.64■■■■□ 3.14
ABCF3-216ENST00000485921 TXNDC2Q86VQ3 553 aa34.63■■■■□ 3.13
ABCF3-216ENST00000485921 EID1Q9Y6B2 187 aa34.62■■■■□ 3.13
ABCF3-216ENST00000485921 KIF1BO60333 1816 aa34.61■■■■□ 3.13
ABCF3-216ENST00000485921 ZNF326Q5BKZ1 582 aaKnown RBP34.61■■■■□ 3.13
ABCF3-216ENST00000485921 LTKP29376 864 aa34.6■■■■□ 3.13
ABCF3-216ENST00000485921 DMRT2Q9Y5R5 561 aa34.58■■■■□ 3.13
ABCF3-216ENST00000485921 SCAF11Q99590 1463 aaKnown RBP34.58■■■■□ 3.13
ABCF3-216ENST00000485921 RIMS2Q9UQ26 1411 aa34.57■■■■□ 3.13
ABCF3-216ENST00000485921 HDGFP51858 240 aaKnown RBP34.56■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms