RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 NAIPQ13075 1403 aa23.37■■□□□ 1.33
RPUSD3-217ENST00000485705 RIMS1Q86UR5 1692 aaKnown RBP23.36■■□□□ 1.33
RPUSD3-217ENST00000485705 GCC2Q8IWJ2 1684 aa23.35■■□□□ 1.33
RPUSD3-217ENST00000485705 MROH1Q8NDA8 1641 aa23.35■■□□□ 1.33
RPUSD3-217ENST00000485705 HFM1A2PYH4 1435 aa23.33■■□□□ 1.33
RPUSD3-217ENST00000485705 DEPDC5O75140 1603 aa23.32■■□□□ 1.32
RPUSD3-217ENST00000485705 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.31■■□□□ 1.32
RPUSD3-217ENST00000485705 CLTCQ00610 1675 aaKnown RBP23.31■■□□□ 1.32
RPUSD3-217ENST00000485705 ESF1Q9H501 851 aaKnown RBP23.28■■□□□ 1.32
RPUSD3-217ENST00000485705 PPP6R1Q9UPN7 881 aa23.28■■□□□ 1.32
RPUSD3-217ENST00000485705 PRDM15P57071 1507 aaPredicted RBP23.28■■□□□ 1.32
RPUSD3-217ENST00000485705 PTPRMP28827 1452 aa23.27■■□□□ 1.32
RPUSD3-217ENST00000485705 CEP152O94986 1710 aa23.27■■□□□ 1.32
RPUSD3-217ENST00000485705 TRIM26Q12899 539 aaPredicted RBP23.26■■□□□ 1.31
RPUSD3-217ENST00000485705 PLPPR3Q6T4P5 718 aa23.26■■□□□ 1.31
RPUSD3-217ENST00000485705 WASHC2CQ9Y4E1 1318 aa23.26■■□□□ 1.31
RPUSD3-217ENST00000485705 KDM5DQ9BY66 1539 aa23.25■■□□□ 1.31
RPUSD3-217ENST00000485705 UNC13BO14795 1591 aa23.25■■□□□ 1.31
RPUSD3-217ENST00000485705 CNTLNQ9NXG0 1405 aa23.25■■□□□ 1.31
RPUSD3-217ENST00000485705 ABCC3O15438 1527 aa23.24■■□□□ 1.31
RPUSD3-217ENST00000485705 CEBPAP49715 358 aaPredicted RBP23.24■■□□□ 1.31
RPUSD3-217ENST00000485705 MROH2AA6NES4 1674 aa23.23■■□□□ 1.31
RPUSD3-217ENST00000485705 C3P01024 1663 aa23.23■■□□□ 1.31
RPUSD3-217ENST00000485705 VWDEQ8N2E2 1590 aa23.23■■□□□ 1.31
RPUSD3-217ENST00000485705 ZMYM3Q14202 1370 aa23.22■■□□□ 1.31
RPUSD3-217ENST00000485705 SETD5Q9C0A6 1442 aa23.22■■□□□ 1.31
RPUSD3-217ENST00000485705 KANK1Q14678 1352 aa23.21■■□□□ 1.31
RPUSD3-217ENST00000485705 FAM135AQ9P2D6 1515 aa23.21■■□□□ 1.31
RPUSD3-217ENST00000485705 ZC3H13Q5T200 1668 aaKnown RBP23.21■■□□□ 1.31
RPUSD3-217ENST00000485705 CFAP65Q6ZU64 1925 aaKnown RBP23.21■■□□□ 1.31
RPUSD3-217ENST00000485705 NUP155O75694 1391 aa23.18■■□□□ 1.3
RPUSD3-217ENST00000485705 CAMSAP1Q5T5Y3 1602 aa23.18■■□□□ 1.3
RPUSD3-217ENST00000485705 RAB3GAP2Q9H2M9 1393 aa23.16■■□□□ 1.3
RPUSD3-217ENST00000485705 IQGAP3Q86VI3 1631 aa23.16■■□□□ 1.3
RPUSD3-217ENST00000485705 LMTK2Q8IWU2 1503 aa23.15■■□□□ 1.3
RPUSD3-217ENST00000485705 TRIM52Q96A61 297 aa23.14■■□□□ 1.29
RPUSD3-217ENST00000485705 FBXO31Q5XUX0 539 aaPredicted RBP23.13■■□□□ 1.29
RPUSD3-217ENST00000485705 PZPP20742 1482 aa23.11■■□□□ 1.29
RPUSD3-217ENST00000485705 SETD1BQ9UPS6 1966 aaKnown RBP23.11■■□□□ 1.29
RPUSD3-217ENST00000485705 TET3O43151 1660 aa23.11■■□□□ 1.29
RPUSD3-217ENST00000485705 NPATQ14207 1427 aa23.09■■□□□ 1.29
RPUSD3-217ENST00000485705 EFCAB6Q5THR3 1501 aa23.09■■□□□ 1.29
RPUSD3-217ENST00000485705 ARHGAP31Q2M1Z3 1444 aa23.08■■□□□ 1.29
RPUSD3-217ENST00000485705 E9PCH4 1651 aa23.06■■□□□ 1.28
RPUSD3-217ENST00000485705 PREX1Q8TCU6 1659 aa23.05■■□□□ 1.28
RPUSD3-217ENST00000485705 ERVK-7P63135 1459 aa23.05■■□□□ 1.28
RPUSD3-217ENST00000485705 HRCP23327 699 aa23.03■■□□□ 1.28
RPUSD3-217ENST00000485705 SLC4A1APQ9BWU0 796 aaKnown RBP23.03■■□□□ 1.28
RPUSD3-217ENST00000485705 PCGF6Q9BYE7 350 aa23.03■■□□□ 1.28
RPUSD3-217ENST00000485705 SPATA31D1Q6ZQQ2 1576 aa23.02■■□□□ 1.28
RPUSD3-217ENST00000485705 TNRQ92752 1358 aa23.01■■□□□ 1.27
RPUSD3-217ENST00000485705 MPHOSPH9Q99550 1183 aa23■■□□□ 1.27
RPUSD3-217ENST00000485705 RPRD2Q5VT52 1461 aaKnown RBP22.99■■□□□ 1.27
RPUSD3-217ENST00000485705 PKD2Q13563 968 aa22.99■■□□□ 1.27
RPUSD3-217ENST00000485705 ACIN1Q9UKV3 1341 aaKnown RBP22.98■■□□□ 1.27
RPUSD3-217ENST00000485705 NOS1P29475 1434 aa22.98■■□□□ 1.27
RPUSD3-217ENST00000485705 FOXD1Q16676 465 aa22.97■■□□□ 1.27
RPUSD3-217ENST00000485705 SYNMO15061 1565 aa22.97■■□□□ 1.27
RPUSD3-217ENST00000485705 MYO3AQ8NEV4 1616 aa22.97■■□□□ 1.27
RPUSD3-217ENST00000485705 UHRF1BP1Q6BDS2 1440 aa22.94■■□□□ 1.26
RPUSD3-217ENST00000485705 SPHKAPQ2M3C7 1700 aa22.94■■□□□ 1.26
RPUSD3-217ENST00000485705 LMTK3Q96Q04 1460 aa22.93■■□□□ 1.26
RPUSD3-217ENST00000485705 UGGT1Q9NYU2 1555 aa22.9■■□□□ 1.26
RPUSD3-217ENST00000485705 CEP170BQ9Y4F5 1589 aaPredicted RBP22.9■■□□□ 1.26
RPUSD3-217ENST00000485705 ZNF142P52746 1687 aaPredicted RBP22.9■■□□□ 1.26
RPUSD3-217ENST00000485705 PTPRTO14522 1441 aa22.9■■□□□ 1.26
RPUSD3-217ENST00000485705 IDI1Q13907 227 aa22.89■■□□□ 1.25
RPUSD3-217ENST00000485705 PLA2R1Q13018 1463 aa22.89■■□□□ 1.25
RPUSD3-217ENST00000485705 NLRP1Q9C000 1473 aa22.89■■□□□ 1.25
RPUSD3-217ENST00000485705 A2ML1A8K2U0 1454 aa22.88■■□□□ 1.25
RPUSD3-217ENST00000485705 HSPA2P54652 639 aa22.88■■□□□ 1.25
RPUSD3-217ENST00000485705 PIK3C2BO00750 1634 aa22.87■■□□□ 1.25
RPUSD3-217ENST00000485705 TRPM2O94759 1503 aa22.84■■□□□ 1.25
RPUSD3-217ENST00000485705 SLC52A1Q9NWF4 448 aa22.84■■□□□ 1.25
RPUSD3-217ENST00000485705 CLTCL1P53675 1640 aa22.83■■□□□ 1.25
RPUSD3-217ENST00000485705 UBR1Q8IWV7 1749 aa22.83■■□□□ 1.25
RPUSD3-217ENST00000485705 MYO5BQ9ULV0 1848 aa22.82■■□□□ 1.24
RPUSD3-217ENST00000485705 DHX57Q6P158 1386 aaKnown RBP22.78■■□□□ 1.24
RPUSD3-217ENST00000485705 STAG3Q9UJ98 1225 aa22.78■■□□□ 1.24
RPUSD3-217ENST00000485705 ADGRB3O60242 1522 aa22.77■■□□□ 1.24
RPUSD3-217ENST00000485705 ANKRD30BQ9BXX2 1392 aa22.77■■□□□ 1.24
RPUSD3-217ENST00000485705 CHGAP10645 457 aaKnown RBP22.77■■□□□ 1.24
RPUSD3-217ENST00000485705 TMEM131LA2VDJ0 1609 aa22.77■■□□□ 1.24
RPUSD3-217ENST00000485705 THEMISQ8N1K5 641 aaPredicted RBP22.76■■□□□ 1.23
RPUSD3-217ENST00000485705 KIF1BO60333 1816 aa22.75■■□□□ 1.23
RPUSD3-217ENST00000485705 KDM5AP29375 1690 aaKnown RBP22.75■■□□□ 1.23
RPUSD3-217ENST00000485705 CCDC144AA2RUR9 1427 aa22.74■■□□□ 1.23
RPUSD3-217ENST00000485705 STRCQ7RTU9 1775 aa22.73■■□□□ 1.23
RPUSD3-217ENST00000485705 NCKAP5LQ9HCH0 1330 aa22.7■■□□□ 1.22
RPUSD3-217ENST00000485705 ARHGAP23Q9P227 1491 aa22.69■■□□□ 1.22
RPUSD3-217ENST00000485705 TMEM2Q9UHN6 1383 aa22.69■■□□□ 1.22
RPUSD3-217ENST00000485705 SLIT1O75093 1534 aa22.68■■□□□ 1.22
RPUSD3-217ENST00000485705 POLR1AO95602 1720 aaPredicted RBP22.66■■□□□ 1.22
RPUSD3-217ENST00000485705 LTKP29376 864 aa22.66■■□□□ 1.22
RPUSD3-217ENST00000485705 ZNF326Q5BKZ1 582 aaKnown RBP22.65■■□□□ 1.22
RPUSD3-217ENST00000485705 ANKLE2Q86XL3 938 aa22.65■■□□□ 1.22
RPUSD3-217ENST00000485705 SPATA31E1Q6ZUB1 1445 aa22.65■■□□□ 1.22
RPUSD3-217ENST00000485705 TXNDC2Q86VQ3 553 aa22.64■■□□□ 1.21
RPUSD3-217ENST00000485705 ZFYVE9O95405 1425 aa22.64■■□□□ 1.21
RPUSD3-217ENST00000485705 RIMS2Q9UQ26 1411 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms