RNA–Protein interactions for RNA: ENST00000485515.5

SDHB-207, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 5

Gene SDHB, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-207ENST00000485515 FAM135AQ9P2D6 1515 aa19.25■□□□□ 0.67
SDHB-207ENST00000485515 NCOA1Q15788 1441 aa19.25■□□□□ 0.67
SDHB-207ENST00000485515 ERBINQ96RT1 1412 aa19.25■□□□□ 0.67
SDHB-207ENST00000485515 CLTCQ00610 1675 aaKnown RBP19.24■□□□□ 0.67
SDHB-207ENST00000485515 ITGAEP38570 1179 aa19.24■□□□□ 0.67
SDHB-207ENST00000485515 C3P01024 1663 aa19.24■□□□□ 0.67
SDHB-207ENST00000485515 SETD1BQ9UPS6 1966 aaKnown RBP19.23■□□□□ 0.67
SDHB-207ENST00000485515 UHRF1BP1Q6BDS2 1440 aa19.23■□□□□ 0.67
SDHB-207ENST00000485515 KDM5DQ9BY66 1539 aa19.22■□□□□ 0.67
SDHB-207ENST00000485515 ADGRL2O95490 1459 aa19.22■□□□□ 0.67
SDHB-207ENST00000485515 NPATQ14207 1427 aa19.21■□□□□ 0.67
SDHB-207ENST00000485515 LMTK3Q96Q04 1460 aa19.21■□□□□ 0.67
SDHB-207ENST00000485515 KANK1Q14678 1352 aa19.2■□□□□ 0.66
SDHB-207ENST00000485515 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.19■□□□□ 0.661e-7■□□□□ 11.1
SDHB-207ENST00000485515 PREX1Q8TCU6 1659 aa19.19■□□□□ 0.66
SDHB-207ENST00000485515 RNF17Q9BXT8 1623 aaKnown RBP19.18■□□□□ 0.66
SDHB-207ENST00000485515 RRBP1Q9P2E9 1410 aaKnown RBP19.17■□□□□ 0.66
SDHB-207ENST00000485515 HSPA2P54652 639 aa19.17■□□□□ 0.66
SDHB-207ENST00000485515 ROCK1Q13464 1354 aa19.17■□□□□ 0.66
SDHB-207ENST00000485515 ANKRD50Q9ULJ7 1429 aa19.16■□□□□ 0.66
SDHB-207ENST00000485515 PTPRKQ15262 1439 aa19.15■□□□□ 0.66
SDHB-207ENST00000485515 ZC3H13Q5T200 1668 aaKnown RBP19.14■□□□□ 0.65
SDHB-207ENST00000485515 PZPP20742 1482 aa19.13■□□□□ 0.65
SDHB-207ENST00000485515 ABCC3O15438 1527 aa19.12■□□□□ 0.65
SDHB-207ENST00000485515 PRDM15P57071 1507 aaPredicted RBP19.1■□□□□ 0.65
SDHB-207ENST00000485515 FBXO31Q5XUX0 539 aaPredicted RBP19.1■□□□□ 0.65
SDHB-207ENST00000485515 TNRQ92752 1358 aa19.09■□□□□ 0.65
SDHB-207ENST00000485515 MROH1Q8NDA8 1641 aa19.09■□□□□ 0.65
SDHB-207ENST00000485515 DMRT2Q9Y5R5 561 aa19.08■□□□□ 0.64
SDHB-207ENST00000485515 DEPDC5O75140 1603 aa19.07■□□□□ 0.64
SDHB-207ENST00000485515 CEP152O94986 1710 aa19.05■□□□□ 0.64
SDHB-207ENST00000485515 CAMSAP1Q5T5Y3 1602 aa19.04■□□□□ 0.64
SDHB-207ENST00000485515 ARHGAP31Q2M1Z3 1444 aa19.04■□□□□ 0.64
SDHB-207ENST00000485515 MYO3AQ8NEV4 1616 aa19.03■□□□□ 0.64
SDHB-207ENST00000485515 NLRP1Q9C000 1473 aa19.03■□□□□ 0.64
SDHB-207ENST00000485515 CEP170BQ9Y4F5 1589 aaPredicted RBP19.02■□□□□ 0.64
SDHB-207ENST00000485515 A2ML1A8K2U0 1454 aa19.02■□□□□ 0.63
SDHB-207ENST00000485515 LMTK2Q8IWU2 1503 aa19.01■□□□□ 0.63
SDHB-207ENST00000485515 THEMISQ8N1K5 641 aaPredicted RBP19.01■□□□□ 0.63
SDHB-207ENST00000485515 ERVK-7P63135 1459 aa19.01■□□□□ 0.63
SDHB-207ENST00000485515 ZNF142P52746 1687 aaPredicted RBP19■□□□□ 0.63
SDHB-207ENST00000485515 SPATA31D1Q6ZQQ2 1576 aa18.99■□□□□ 0.63
SDHB-207ENST00000485515 VWDEQ8N2E2 1590 aa18.99■□□□□ 0.63
SDHB-207ENST00000485515 NUP155O75694 1391 aa18.98■□□□□ 0.63
SDHB-207ENST00000485515 PKD2Q13563 968 aa18.98■□□□□ 0.63
SDHB-207ENST00000485515 CFAP65Q6ZU64 1925 aaKnown RBP18.96■□□□□ 0.63
SDHB-207ENST00000485515 STAG3Q9UJ98 1225 aa18.96■□□□□ 0.63
SDHB-207ENST00000485515 UNC13BO14795 1591 aa18.96■□□□□ 0.63
SDHB-207ENST00000485515 PLA2R1Q13018 1463 aa18.96■□□□□ 0.63
SDHB-207ENST00000485515 UGGT1Q9NYU2 1555 aa18.95■□□□□ 0.62
SDHB-207ENST00000485515 NAIPQ13075 1403 aa18.95■□□□□ 0.62
SDHB-207ENST00000485515 RPRD2Q5VT52 1461 aaKnown RBP18.95■□□□□ 0.62
SDHB-207ENST00000485515 EFCAB6Q5THR3 1501 aa18.95■□□□□ 0.62
SDHB-207ENST00000485515 HFM1A2PYH4 1435 aa18.94■□□□□ 0.62
SDHB-207ENST00000485515 ANKLE2Q86XL3 938 aa18.93■□□□□ 0.62
SDHB-207ENST00000485515 TET3O43151 1660 aa18.92■□□□□ 0.62
SDHB-207ENST00000485515 TRIM52Q96A61 297 aa18.92■□□□□ 0.62
SDHB-207ENST00000485515 SLC52A1Q9NWF4 448 aa18.92■□□□□ 0.62
SDHB-207ENST00000485515 NCKAP5LQ9HCH0 1330 aa18.92■□□□□ 0.62
SDHB-207ENST00000485515 PTPRTO14522 1441 aa18.91■□□□□ 0.62
SDHB-207ENST00000485515 STRCQ7RTU9 1775 aa18.91■□□□□ 0.62
SDHB-207ENST00000485515 GCC2Q8IWJ2 1684 aa18.9■□□□□ 0.62
SDHB-207ENST00000485515 IQGAP3Q86VI3 1631 aa18.89■□□□□ 0.62
SDHB-207ENST00000485515 ACIN1Q9UKV3 1341 aaKnown RBP18.89■□□□□ 0.61
SDHB-207ENST00000485515 IDI1Q13907 227 aa18.88■□□□□ 0.61
SDHB-207ENST00000485515 NOS1P29475 1434 aa18.88■□□□□ 0.61
SDHB-207ENST00000485515 EID1Q9Y6B2 187 aa18.87■□□□□ 0.61
SDHB-207ENST00000485515 HDGFP51858 240 aaKnown RBP18.82■□□□□ 0.6
SDHB-207ENST00000485515 TXNDC2Q86VQ3 553 aa18.82■□□□□ 0.6
SDHB-207ENST00000485515 SLC4A1APQ9BWU0 796 aaKnown RBP18.82■□□□□ 0.6
SDHB-207ENST00000485515 UBR1Q8IWV7 1749 aa18.82■□□□□ 0.6
SDHB-207ENST00000485515 E9PCH4 1651 aa18.82■□□□□ 0.6
SDHB-207ENST00000485515 SYNMO15061 1565 aa18.81■□□□□ 0.6
SDHB-207ENST00000485515 CHGAP10645 457 aaKnown RBP18.81■□□□□ 0.6
SDHB-207ENST00000485515 PIK3C2BO00750 1634 aa18.81■□□□□ 0.6
SDHB-207ENST00000485515 POLR1AO95602 1720 aaPredicted RBP18.8■□□□□ 0.6
SDHB-207ENST00000485515 KDM5AP29375 1690 aaKnown RBP18.79■□□□□ 0.6
SDHB-207ENST00000485515 NPHP4O75161 1426 aaPredicted RBP18.79■□□□□ 0.6
SDHB-207ENST00000485515 SETD5Q9C0A6 1442 aa18.79■□□□□ 0.6
SDHB-207ENST00000485515 TMEM2Q9UHN6 1383 aa18.79■□□□□ 0.6
SDHB-207ENST00000485515 CERKQ8TCT0 537 aa18.78■□□□□ 0.6
SDHB-207ENST00000485515 SCAF11Q99590 1463 aaKnown RBP18.77■□□□□ 0.6
SDHB-207ENST00000485515 SLIT1O75093 1534 aa18.77■□□□□ 0.6
SDHB-207ENST00000485515 ADGRB3O60242 1522 aa18.76■□□□□ 0.59
SDHB-207ENST00000485515 MED14O60244 1454 aa18.76■□□□□ 0.59
SDHB-207ENST00000485515 ARHGAP23Q9P227 1491 aa18.75■□□□□ 0.59
SDHB-207ENST00000485515 NEURL4Q96JN8 1562 aa18.74■□□□□ 0.59
SDHB-207ENST00000485515 PPP1R15AO75807 674 aaPredicted RBP18.74■□□□□ 0.59
SDHB-207ENST00000485515 LTKP29376 864 aa18.74■□□□□ 0.59
SDHB-207ENST00000485515 BCANQ96GW7 911 aa18.74■□□□□ 0.59
SDHB-207ENST00000485515 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.73■□□□□ 0.59
SDHB-207ENST00000485515 ZNF335Q9H4Z2 1342 aaPredicted RBP18.73■□□□□ 0.59
SDHB-207ENST00000485515 MPHOSPH9Q99550 1183 aa18.72■□□□□ 0.59
SDHB-207ENST00000485515 IQGAP1P46940 1657 aa18.72■□□□□ 0.59
SDHB-207ENST00000485515 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
SDHB-207ENST00000485515 RAB3GAP2Q9H2M9 1393 aa18.7■□□□□ 0.58
SDHB-207ENST00000485515 ZNF326Q5BKZ1 582 aaKnown RBP18.7■□□□□ 0.58
SDHB-207ENST00000485515 FBXO41Q8TF61 875 aa18.7■□□□□ 0.58
SDHB-207ENST00000485515 TMEM131LA2VDJ0 1609 aa18.69■□□□□ 0.58
SDHB-207ENST00000485515 RIMS2Q9UQ26 1411 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms