RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 CLTCQ00610 1675 aaKnown RBP17.97■□□□□ 0.47
APTX-227ENST00000485479 ROCK1Q13464 1354 aa17.97■□□□□ 0.47
APTX-227ENST00000485479 MROH1Q8NDA8 1641 aa17.97■□□□□ 0.47
APTX-227ENST00000485479 EIF2AK4Q9P2K8 1649 aaKnown RBP17.96■□□□□ 0.47
APTX-227ENST00000485479 PTPRMP28827 1452 aa17.96■□□□□ 0.47
APTX-227ENST00000485479 RNF17Q9BXT8 1623 aaKnown RBP17.94■□□□□ 0.46
APTX-227ENST00000485479 NAIPQ13075 1403 aa17.94■□□□□ 0.46
APTX-227ENST00000485479 ESF1Q9H501 851 aaKnown RBP17.94■□□□□ 0.46
APTX-227ENST00000485479 CEP152O94986 1710 aa17.93■□□□□ 0.46
APTX-227ENST00000485479 GCC2Q8IWJ2 1684 aa17.92■□□□□ 0.46
APTX-227ENST00000485479 WASHC2CQ9Y4E1 1318 aa17.92■□□□□ 0.46
APTX-227ENST00000485479 C3P01024 1663 aa17.9■□□□□ 0.46
APTX-227ENST00000485479 DEPDC5O75140 1603 aa17.9■□□□□ 0.46
APTX-227ENST00000485479 HFM1A2PYH4 1435 aa17.89■□□□□ 0.46
APTX-227ENST00000485479 PRDM15P57071 1507 aaPredicted RBP17.89■□□□□ 0.45
APTX-227ENST00000485479 KDM5DQ9BY66 1539 aa17.89■□□□□ 0.45
APTX-227ENST00000485479 ABCC3O15438 1527 aa17.88■□□□□ 0.45
APTX-227ENST00000485479 ZMYM3Q14202 1370 aa17.87■□□□□ 0.45
APTX-227ENST00000485479 CFAP65Q6ZU64 1925 aaKnown RBP17.86■□□□□ 0.45
APTX-227ENST00000485479 UNC13BO14795 1591 aa17.85■□□□□ 0.45
APTX-227ENST00000485479 FBXO31Q5XUX0 539 aaPredicted RBP17.84■□□□□ 0.45
APTX-227ENST00000485479 CAMSAP1Q5T5Y3 1602 aa17.84■□□□□ 0.45
APTX-227ENST00000485479 MROH2AA6NES4 1674 aa17.84■□□□□ 0.45
APTX-227ENST00000485479 CNTLNQ9NXG0 1405 aa17.84■□□□□ 0.45
APTX-227ENST00000485479 ZC3H13Q5T200 1668 aaKnown RBP17.82■□□□□ 0.44
APTX-227ENST00000485479 NUP155O75694 1391 aa17.82■□□□□ 0.44
APTX-227ENST00000485479 VWDEQ8N2E2 1590 aa17.82■□□□□ 0.44
APTX-227ENST00000485479 KANK1Q14678 1352 aa17.81■□□□□ 0.44
APTX-227ENST00000485479 TRIM52Q96A61 297 aa17.81■□□□□ 0.44
APTX-227ENST00000485479 PPP6R1Q9UPN7 881 aa17.8■□□□□ 0.44
APTX-227ENST00000485479 RAB3GAP2Q9H2M9 1393 aa17.8■□□□□ 0.44
APTX-227ENST00000485479 SETD5Q9C0A6 1442 aa17.79■□□□□ 0.44
APTX-227ENST00000485479 FAM135AQ9P2D6 1515 aa17.78■□□□□ 0.44
APTX-227ENST00000485479 TRIM26Q12899 539 aaPredicted RBP17.78■□□□□ 0.44
APTX-227ENST00000485479 NPATQ14207 1427 aa17.78■□□□□ 0.44
APTX-227ENST00000485479 IQGAP3Q86VI3 1631 aa17.77■□□□□ 0.44
APTX-227ENST00000485479 PZPP20742 1482 aa17.77■□□□□ 0.44
APTX-227ENST00000485479 EFCAB6Q5THR3 1501 aa17.76■□□□□ 0.43
APTX-227ENST00000485479 LMTK2Q8IWU2 1503 aa17.75■□□□□ 0.43
APTX-227ENST00000485479 E9PCH4 1651 aa17.74■□□□□ 0.43
APTX-227ENST00000485479 TET3O43151 1660 aa17.74■□□□□ 0.43
APTX-227ENST00000485479 PREX1Q8TCU6 1659 aa17.73■□□□□ 0.43
APTX-227ENST00000485479 HSPA2P54652 639 aa17.73■□□□□ 0.43
APTX-227ENST00000485479 FOXD1Q16676 465 aa17.73■□□□□ 0.43
APTX-227ENST00000485479 ERVK-7P63135 1459 aa17.72■□□□□ 0.43
APTX-227ENST00000485479 MYO3AQ8NEV4 1616 aa17.72■□□□□ 0.43
APTX-227ENST00000485479 LMTK3Q96Q04 1460 aa17.72■□□□□ 0.43
APTX-227ENST00000485479 TNRQ92752 1358 aa17.71■□□□□ 0.43
APTX-227ENST00000485479 SLC4A1APQ9BWU0 796 aaKnown RBP17.7■□□□□ 0.42
APTX-227ENST00000485479 SPATA31D1Q6ZQQ2 1576 aa17.7■□□□□ 0.42
APTX-227ENST00000485479 PCGF6Q9BYE7 350 aa17.7■□□□□ 0.42
APTX-227ENST00000485479 UGGT1Q9NYU2 1555 aa17.69■□□□□ 0.42
APTX-227ENST00000485479 ARHGAP31Q2M1Z3 1444 aa17.69■□□□□ 0.42
APTX-227ENST00000485479 UHRF1BP1Q6BDS2 1440 aa17.69■□□□□ 0.42
APTX-227ENST00000485479 SYNMO15061 1565 aa17.68■□□□□ 0.42
APTX-227ENST00000485479 PKD2Q13563 968 aa17.68■□□□□ 0.42
APTX-227ENST00000485479 SETD1BQ9UPS6 1966 aaKnown RBP17.67■□□□□ 0.42
APTX-227ENST00000485479 MPHOSPH9Q99550 1183 aa17.65■□□□□ 0.42
APTX-227ENST00000485479 CEP170BQ9Y4F5 1589 aaPredicted RBP17.65■□□□□ 0.42
APTX-227ENST00000485479 NOS1P29475 1434 aa17.63■□□□□ 0.41
APTX-227ENST00000485479 RPRD2Q5VT52 1461 aaKnown RBP17.63■□□□□ 0.41
APTX-227ENST00000485479 SPHKAPQ2M3C7 1700 aa17.62■□□□□ 0.41
APTX-227ENST00000485479 PIK3C2BO00750 1634 aa17.62■□□□□ 0.41
APTX-227ENST00000485479 ZNF142P52746 1687 aaPredicted RBP17.62■□□□□ 0.41
APTX-227ENST00000485479 IDI1Q13907 227 aa17.61■□□□□ 0.41
APTX-227ENST00000485479 A2ML1A8K2U0 1454 aa17.59■□□□□ 0.41
APTX-227ENST00000485479 PLA2R1Q13018 1463 aa17.59■□□□□ 0.41
APTX-227ENST00000485479 NLRP1Q9C000 1473 aa17.58■□□□□ 0.41
APTX-227ENST00000485479 CHGAP10645 457 aaKnown RBP17.58■□□□□ 0.4
APTX-227ENST00000485479 SENP3Q9H4L4 574 aaPredicted RBP17.58■□□□□ 0.4
APTX-227ENST00000485479 MYO5BQ9ULV0 1848 aa17.58■□□□□ 0.4
APTX-227ENST00000485479 UBR1Q8IWV7 1749 aa17.57■□□□□ 0.4
APTX-227ENST00000485479 CLTCL1P53675 1640 aa17.56■□□□□ 0.4
APTX-227ENST00000485479 STAG3Q9UJ98 1225 aa17.56■□□□□ 0.4
APTX-227ENST00000485479 PTPRTO14522 1441 aa17.55■□□□□ 0.4
APTX-227ENST00000485479 TRPM2O94759 1503 aa17.54■□□□□ 0.4
APTX-227ENST00000485479 NCKAP5LQ9HCH0 1330 aa17.53■□□□□ 0.4
APTX-227ENST00000485479 STRCQ7RTU9 1775 aa17.53■□□□□ 0.4
APTX-227ENST00000485479 HRCP23327 699 aa17.52■□□□□ 0.4
APTX-227ENST00000485479 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.4
APTX-227ENST00000485479 ADGRB3O60242 1522 aa17.52■□□□□ 0.4
APTX-227ENST00000485479 SLC52A1Q9NWF4 448 aa17.51■□□□□ 0.39
APTX-227ENST00000485479 TMEM131LA2VDJ0 1609 aa17.51■□□□□ 0.39
APTX-227ENST00000485479 THEMISQ8N1K5 641 aaPredicted RBP17.49■□□□□ 0.39
APTX-227ENST00000485479 CCDC144AA2RUR9 1427 aa17.48■□□□□ 0.39
APTX-227ENST00000485479 LTKP29376 864 aa17.47■□□□□ 0.39
APTX-227ENST00000485479 DHX57Q6P158 1386 aaKnown RBP17.47■□□□□ 0.39
APTX-227ENST00000485479 POLR1AO95602 1720 aaPredicted RBP17.46■□□□□ 0.39
APTX-227ENST00000485479 KIF1BO60333 1816 aa17.46■□□□□ 0.39
APTX-227ENST00000485479 ZNF326Q5BKZ1 582 aaKnown RBP17.46■□□□□ 0.39
APTX-227ENST00000485479 RGL3Q3MIN7 710 aa17.45■□□□□ 0.38
APTX-227ENST00000485479 NEURL4Q96JN8 1562 aa17.45■□□□□ 0.38
APTX-227ENST00000485479 ANKRD30BQ9BXX2 1392 aa17.45■□□□□ 0.38
APTX-227ENST00000485479 TMEM2Q9UHN6 1383 aa17.45■□□□□ 0.38
APTX-227ENST00000485479 ACIN1Q9UKV3 1341 aaKnown RBP17.44■□□□□ 0.38
APTX-227ENST00000485479 TXNDC2Q86VQ3 553 aa17.44■□□□□ 0.38
APTX-227ENST00000485479 KDM5AP29375 1690 aaKnown RBP17.43■□□□□ 0.38
APTX-227ENST00000485479 SLIT1O75093 1534 aa17.43■□□□□ 0.38
APTX-227ENST00000485479 ANKLE2Q86XL3 938 aa17.42■□□□□ 0.38
APTX-227ENST00000485479 ARHGAP23Q9P227 1491 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms