RNA–Protein interactions for RNA: ENST00000485403.6

ERCC2-205, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC2, Length 1,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-205ENST00000485403 MROH1Q8NDA8 1641 aa27.84■■■□□ 2.05
ERCC2-205ENST00000485403 DEPDC5O75140 1603 aa27.83■■■□□ 2.05
ERCC2-205ENST00000485403 GGT6Q6P531 493 aa27.83■■■□□ 2.05
ERCC2-205ENST00000485403 PPP6R1Q9UPN7 881 aa27.83■■■□□ 2.05
ERCC2-205ENST00000485403 FAM135AQ9P2D6 1515 aa27.83■■■□□ 2.05
ERCC2-205ENST00000485403 PTPRMP28827 1452 aa27.82■■■□□ 2.04
ERCC2-205ENST00000485403 CNTLNQ9NXG0 1405 aa27.81■■■□□ 2.04
ERCC2-205ENST00000485403 PRDM15P57071 1507 aaPredicted RBP27.79■■■□□ 2.04
ERCC2-205ENST00000485403 GCC2Q8IWJ2 1684 aa27.79■■■□□ 2.04
ERCC2-205ENST00000485403 MROH2AA6NES4 1674 aa27.79■■■□□ 2.04
ERCC2-205ENST00000485403 HFM1A2PYH4 1435 aa27.78■■■□□ 2.04
ERCC2-205ENST00000485403 NAIPQ13075 1403 aa27.78■■■□□ 2.04
ERCC2-205ENST00000485403 CLTCQ00610 1675 aaKnown RBP27.77■■■□□ 2.04
ERCC2-205ENST00000485403 KDM5DQ9BY66 1539 aa27.76■■■□□ 2.04
ERCC2-205ENST00000485403 ZC3H13Q5T200 1668 aaKnown RBP27.74■■■□□ 2.03
ERCC2-205ENST00000485403 ESF1Q9H501 851 aaKnown RBP27.73■■■□□ 2.03
ERCC2-205ENST00000485403 C3P01024 1663 aa27.72■■■□□ 2.03
ERCC2-205ENST00000485403 UNC13BO14795 1591 aa27.72■■■□□ 2.03
ERCC2-205ENST00000485403 ABCC3O15438 1527 aa27.72■■■□□ 2.03
ERCC2-205ENST00000485403 VWDEQ8N2E2 1590 aa27.72■■■□□ 2.03
ERCC2-205ENST00000485403 WASHC2CQ9Y4E1 1318 aa27.69■■■□□ 2.02
ERCC2-205ENST00000485403 CEP152O94986 1710 aa27.68■■■□□ 2.02
ERCC2-205ENST00000485403 ZMYM3Q14202 1370 aa27.68■■■□□ 2.02
ERCC2-205ENST00000485403 KANK1Q14678 1352 aa27.65■■■□□ 2.02
ERCC2-205ENST00000485403 LMTK2Q8IWU2 1503 aa27.65■■■□□ 2.02
ERCC2-205ENST00000485403 AEBP2Q6ZN18 517 aaPredicted RBP27.64■■■□□ 2.02
ERCC2-205ENST00000485403 CEBPAP49715 358 aaPredicted RBP27.63■■■□□ 2.01
ERCC2-205ENST00000485403 GRWD1Q9BQ67 446 aaKnown RBP eCLIP27.63■■■□□ 2.012e-8■■□□□ 11.9
ERCC2-205ENST00000485403 CAMSAP1Q5T5Y3 1602 aa27.63■■■□□ 2.01
ERCC2-205ENST00000485403 SETD1BQ9UPS6 1966 aaKnown RBP27.62■■■□□ 2.01
ERCC2-205ENST00000485403 PZPP20742 1482 aa27.6■■■□□ 2.01
ERCC2-205ENST00000485403 IQGAP3Q86VI3 1631 aa27.6■■■□□ 2.01
ERCC2-205ENST00000485403 NPATQ14207 1427 aa27.58■■■□□ 2.01
ERCC2-205ENST00000485403 ARHGAP31Q2M1Z3 1444 aa27.57■■■□□ 2
ERCC2-205ENST00000485403 PLPPR3Q6T4P5 718 aa27.56■■■□□ 2
ERCC2-205ENST00000485403 TET3O43151 1660 aa27.56■■■□□ 2
ERCC2-205ENST00000485403 EFCAB6Q5THR3 1501 aa27.55■■■□□ 2
ERCC2-205ENST00000485403 SETD5Q9C0A6 1442 aa27.55■■■□□ 2
ERCC2-205ENST00000485403 NUP155O75694 1391 aa27.55■■■□□ 2
ERCC2-205ENST00000485403 CFAP65Q6ZU64 1925 aaKnown RBP27.52■■■□□ 2
ERCC2-205ENST00000485403 PREX1Q8TCU6 1659 aa27.51■■□□□ 1.99
ERCC2-205ENST00000485403 SPATA31D1Q6ZQQ2 1576 aa27.49■■□□□ 1.99
ERCC2-205ENST00000485403 FBXO31Q5XUX0 539 aaPredicted RBP27.48■■□□□ 1.99
ERCC2-205ENST00000485403 ERVK-7P63135 1459 aa27.48■■□□□ 1.99
ERCC2-205ENST00000485403 RPRD2Q5VT52 1461 aaKnown RBP27.47■■□□□ 1.99
ERCC2-205ENST00000485403 RAB3GAP2Q9H2M9 1393 aa27.47■■□□□ 1.99
ERCC2-205ENST00000485403 E9PCH4 1651 aa27.45■■□□□ 1.99
ERCC2-205ENST00000485403 ACIN1Q9UKV3 1341 aaKnown RBP27.44■■□□□ 1.98
ERCC2-205ENST00000485403 LMTK3Q96Q04 1460 aa27.44■■□□□ 1.98
ERCC2-205ENST00000485403 MYO3AQ8NEV4 1616 aa27.43■■□□□ 1.98
ERCC2-205ENST00000485403 TNRQ92752 1358 aa27.43■■□□□ 1.98
ERCC2-205ENST00000485403 UHRF1BP1Q6BDS2 1440 aa27.42■■□□□ 1.98
ERCC2-205ENST00000485403 TRIM52Q96A61 297 aa27.41■■□□□ 1.98
ERCC2-205ENST00000485403 NOS1P29475 1434 aa27.4■■□□□ 1.98
ERCC2-205ENST00000485403 HRCP23327 699 aa27.4■■□□□ 1.98
ERCC2-205ENST00000485403 ZNF142P52746 1687 aaPredicted RBP27.4■■□□□ 1.98
ERCC2-205ENST00000485403 SYNMO15061 1565 aa27.36■■□□□ 1.97
ERCC2-205ENST00000485403 NLRP1Q9C000 1473 aa27.36■■□□□ 1.97
ERCC2-205ENST00000485403 CEP170BQ9Y4F5 1589 aaPredicted RBP27.36■■□□□ 1.97
ERCC2-205ENST00000485403 A2ML1A8K2U0 1454 aa27.33■■□□□ 1.97
ERCC2-205ENST00000485403 SLC4A1APQ9BWU0 796 aaKnown RBP27.32■■□□□ 1.96
ERCC2-205ENST00000485403 SPHKAPQ2M3C7 1700 aa27.31■■□□□ 1.96
ERCC2-205ENST00000485403 PTPRTO14522 1441 aa27.3■■□□□ 1.96
ERCC2-205ENST00000485403 PIK3C2BO00750 1634 aa27.28■■□□□ 1.96
ERCC2-205ENST00000485403 PKD2Q13563 968 aa27.28■■□□□ 1.96
ERCC2-205ENST00000485403 MPHOSPH9Q99550 1183 aa27.28■■□□□ 1.96
ERCC2-205ENST00000485403 SLC52A1Q9NWF4 448 aa27.25■■□□□ 1.95
ERCC2-205ENST00000485403 KDM5AP29375 1690 aaKnown RBP27.24■■□□□ 1.95
ERCC2-205ENST00000485403 UGGT1Q9NYU2 1555 aa27.24■■□□□ 1.95
ERCC2-205ENST00000485403 UBR1Q8IWV7 1749 aa27.24■■□□□ 1.95
ERCC2-205ENST00000485403 HSPA2P54652 639 aa27.24■■□□□ 1.95
ERCC2-205ENST00000485403 TRPM2O94759 1503 aa27.23■■□□□ 1.95
ERCC2-205ENST00000485403 PLA2R1Q13018 1463 aa27.22■■□□□ 1.95
ERCC2-205ENST00000485403 IDI1Q13907 227 aa27.22■■□□□ 1.95
ERCC2-205ENST00000485403 CCER1Q8TC90 406 aaPredicted RBP27.21■■□□□ 1.95
ERCC2-205ENST00000485403 DHX57Q6P158 1386 aaKnown RBP27.17■■□□□ 1.94
ERCC2-205ENST00000485403 ADGRB3O60242 1522 aa27.17■■□□□ 1.94
ERCC2-205ENST00000485403 FOXD1Q16676 465 aa27.16■■□□□ 1.94
ERCC2-205ENST00000485403 STRCQ7RTU9 1775 aa27.16■■□□□ 1.94
ERCC2-205ENST00000485403 CLTCL1P53675 1640 aa27.15■■□□□ 1.94
ERCC2-205ENST00000485403 THEMISQ8N1K5 641 aaPredicted RBP27.15■■□□□ 1.94
ERCC2-205ENST00000485403 TMEM131LA2VDJ0 1609 aa27.14■■□□□ 1.94
ERCC2-205ENST00000485403 MYO5BQ9ULV0 1848 aa27.14■■□□□ 1.93
ERCC2-205ENST00000485403 SLIT1O75093 1534 aa27.11■■□□□ 1.93
ERCC2-205ENST00000485403 ARHGAP23Q9P227 1491 aa27.1■■□□□ 1.93
ERCC2-205ENST00000485403 STAG3Q9UJ98 1225 aa27.08■■□□□ 1.93
ERCC2-205ENST00000485403 POLR1AO95602 1720 aaPredicted RBP27.08■■□□□ 1.93
ERCC2-205ENST00000485403 KIF1BO60333 1816 aa27.08■■□□□ 1.93
ERCC2-205ENST00000485403 TMEM2Q9UHN6 1383 aa27.06■■□□□ 1.92
ERCC2-205ENST00000485403 ANKRD30BQ9BXX2 1392 aa27.06■■□□□ 1.92
ERCC2-205ENST00000485403 CCDC144AA2RUR9 1427 aa27.05■■□□□ 1.92
ERCC2-205ENST00000485403 NEURL4Q96JN8 1562 aa27.03■■□□□ 1.92
ERCC2-205ENST00000485403 NCKAP5LQ9HCH0 1330 aa27.01■■□□□ 1.91
ERCC2-205ENST00000485403 ZFYVE9O95405 1425 aa27■■□□□ 1.91
ERCC2-205ENST00000485403 ANKLE2Q86XL3 938 aa27■■□□□ 1.91
ERCC2-205ENST00000485403 MED14O60244 1454 aa26.99■■□□□ 1.91
ERCC2-205ENST00000485403 SCAF11Q99590 1463 aaKnown RBP26.99■■□□□ 1.91
ERCC2-205ENST00000485403 CHGAP10645 457 aaKnown RBP26.99■■□□□ 1.91
ERCC2-205ENST00000485403 CLSPNQ9HAW4 1339 aa26.98■■□□□ 1.91
ERCC2-205ENST00000485403 LTKP29376 864 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms