RNA–Protein interactions for RNA: ENST00000485120.1

PKD1-218, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 696 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-218ENST00000485120 SIGLEC1Q9BZZ2 1709 aa30.5■■■□□ 2.47
PKD1-218ENST00000485120 KANK1Q14678 1352 aa30.46■■■□□ 2.47
PKD1-218ENST00000485120 FAM135AQ9P2D6 1515 aa30.45■■■□□ 2.47
PKD1-218ENST00000485120 CNTLNQ9NXG0 1405 aa30.45■■■□□ 2.46
PKD1-218ENST00000485120 WASHC2CQ9Y4E1 1318 aa30.45■■■□□ 2.46
PKD1-218ENST00000485120 RNF17Q9BXT8 1623 aaKnown RBP30.44■■■□□ 2.46
PKD1-218ENST00000485120 GCC2Q8IWJ2 1684 aa30.42■■■□□ 2.46
PKD1-218ENST00000485120 KDM4FA0A1W2PPD8 638 aa30.42■■■□□ 2.46
PKD1-218ENST00000485120 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.42■■■□□ 2.46
PKD1-218ENST00000485120 KDM5DQ9BY66 1539 aa30.38■■■□□ 2.45
PKD1-218ENST00000485120 ADAMTSL3P82987 1691 aa30.38■■■□□ 2.45
PKD1-218ENST00000485120 PRDM15P57071 1507 aaPredicted RBP30.37■■■□□ 2.45
PKD1-218ENST00000485120 NUP155O75694 1391 aa30.37■■■□□ 2.45
PKD1-218ENST00000485120 RAB3GAP2Q9H2M9 1393 aa30.37■■■□□ 2.45
PKD1-218ENST00000485120 DEPDC5O75140 1603 aa30.36■■■□□ 2.45
PKD1-218ENST00000485120 MROH1Q8NDA8 1641 aa30.33■■■□□ 2.45
PKD1-218ENST00000485120 TRIM52Q96A61 297 aa30.33■■■□□ 2.45
PKD1-218ENST00000485120 ZMYM3Q14202 1370 aa30.32■■■□□ 2.44
PKD1-218ENST00000485120 UNC13BO14795 1591 aa30.32■■■□□ 2.44
PKD1-218ENST00000485120 VWDEQ8N2E2 1590 aa30.32■■■□□ 2.44
PKD1-218ENST00000485120 LMTK2Q8IWU2 1503 aa30.31■■■□□ 2.44
PKD1-218ENST00000485120 PCGF6Q9BYE7 350 aa30.3■■■□□ 2.44
PKD1-218ENST00000485120 ABCC3O15438 1527 aa30.29■■■□□ 2.44
PKD1-218ENST00000485120 MADDQ8WXG6 1647 aa30.27■■■□□ 2.44
PKD1-218ENST00000485120 ARHGAP31Q2M1Z3 1444 aa30.26■■■□□ 2.43
PKD1-218ENST00000485120 PTPRMP28827 1452 aa30.25■■■□□ 2.43
PKD1-218ENST00000485120 ZC3H13Q5T200 1668 aaKnown RBP30.24■■■□□ 2.43
PKD1-218ENST00000485120 FER1L4A9Z1Z3 1794 aa30.21■■■□□ 2.43
PKD1-218ENST00000485120 SLC4A1APQ9BWU0 796 aaKnown RBP30.21■■■□□ 2.43
PKD1-218ENST00000485120 IQGAP3Q86VI3 1631 aa30.2■■■□□ 2.43
PKD1-218ENST00000485120 MROH2AA6NES4 1674 aa30.2■■■□□ 2.42
PKD1-218ENST00000485120 MPHOSPH9Q99550 1183 aa30.19■■■□□ 2.42
PKD1-218ENST00000485120 PZPP20742 1482 aa30.18■■■□□ 2.42
PKD1-218ENST00000485120 CEBPAP49715 358 aaPredicted RBP30.17■■■□□ 2.42
PKD1-218ENST00000485120 RPRD2Q5VT52 1461 aaKnown RBP30.17■■■□□ 2.42
PKD1-218ENST00000485120 CLTCQ00610 1675 aaKnown RBP30.17■■■□□ 2.42
PKD1-218ENST00000485120 NPATQ14207 1427 aa30.15■■■□□ 2.42
PKD1-218ENST00000485120 RIMS1Q86UR5 1692 aaKnown RBP30.15■■■□□ 2.42
PKD1-218ENST00000485120 EFCAB6Q5THR3 1501 aa30.12■■■□□ 2.41
PKD1-218ENST00000485120 PKD2Q13563 968 aa30.12■■■□□ 2.41
PKD1-218ENST00000485120 TET3O43151 1660 aa30.11■■■□□ 2.41
PKD1-218ENST00000485120 FBXO31Q5XUX0 539 aaPredicted RBP30.1■■■□□ 2.41
PKD1-218ENST00000485120 CAMSAP1Q5T5Y3 1602 aa30.1■■■□□ 2.41
PKD1-218ENST00000485120 CEP152O94986 1710 aa30.08■■■□□ 2.41
PKD1-218ENST00000485120 PLPPR3Q6T4P5 718 aa30.06■■■□□ 2.4
PKD1-218ENST00000485120 C3P01024 1663 aa30.05■■■□□ 2.4
PKD1-218ENST00000485120 NOS1P29475 1434 aa30.05■■■□□ 2.4
PKD1-218ENST00000485120 ERVK-7P63135 1459 aa30.04■■■□□ 2.4
PKD1-218ENST00000485120 TNRQ92752 1358 aa30.03■■■□□ 2.4
PKD1-218ENST00000485120 SLC52A1Q9NWF4 448 aa30.03■■■□□ 2.4
PKD1-218ENST00000485120 SPATA31D1Q6ZQQ2 1576 aa30.02■■■□□ 2.4
PKD1-218ENST00000485120 PTPRTO14522 1441 aa30.01■■■□□ 2.39
PKD1-218ENST00000485120 AEBP2Q6ZN18 517 aaPredicted RBP29.98■■■□□ 2.39
PKD1-218ENST00000485120 E9PCH4 1651 aa29.96■■■□□ 2.39
PKD1-218ENST00000485120 NLRP1Q9C000 1473 aa29.95■■■□□ 2.39
PKD1-218ENST00000485120 SETD1BQ9UPS6 1966 aaKnown RBP29.93■■■□□ 2.38
PKD1-218ENST00000485120 FOXD1Q16676 465 aa29.92■■■□□ 2.38
PKD1-218ENST00000485120 UHRF1BP1Q6BDS2 1440 aa29.91■■■□□ 2.38
PKD1-218ENST00000485120 IDI1Q13907 227 aa29.91■■■□□ 2.38
PKD1-218ENST00000485120 PREX1Q8TCU6 1659 aa29.91■■■□□ 2.38
PKD1-218ENST00000485120 DHX57Q6P158 1386 aaKnown RBP29.9■■■□□ 2.38
PKD1-218ENST00000485120 PLA2R1Q13018 1463 aa29.89■■■□□ 2.38
PKD1-218ENST00000485120 ANKRD30BQ9BXX2 1392 aa29.88■■■□□ 2.37
PKD1-218ENST00000485120 TRPM2O94759 1503 aa29.86■■■□□ 2.37
PKD1-218ENST00000485120 A2ML1A8K2U0 1454 aa29.85■■■□□ 2.37
PKD1-218ENST00000485120 THEMISQ8N1K5 641 aaPredicted RBP29.84■■■□□ 2.37
PKD1-218ENST00000485120 SYNMO15061 1565 aa29.84■■■□□ 2.37
PKD1-218ENST00000485120 CCDC144AA2RUR9 1427 aa29.81■■■□□ 2.36
PKD1-218ENST00000485120 STAG3Q9UJ98 1225 aa29.81■■■□□ 2.36
PKD1-218ENST00000485120 SPHKAPQ2M3C7 1700 aa29.79■■■□□ 2.36
PKD1-218ENST00000485120 PIK3C2BO00750 1634 aa29.76■■■□□ 2.35
PKD1-218ENST00000485120 MYO3AQ8NEV4 1616 aa29.76■■■□□ 2.35
PKD1-218ENST00000485120 CFAP65Q6ZU64 1925 aaKnown RBP29.76■■■□□ 2.35
PKD1-218ENST00000485120 CLSPNQ9HAW4 1339 aa29.75■■■□□ 2.35
PKD1-218ENST00000485120 LMTK3Q96Q04 1460 aa29.75■■■□□ 2.35
PKD1-218ENST00000485120 CEP170BQ9Y4F5 1589 aaPredicted RBP29.75■■■□□ 2.35
PKD1-218ENST00000485120 UGGT1Q9NYU2 1555 aa29.74■■■□□ 2.35
PKD1-218ENST00000485120 CHGAP10645 457 aaKnown RBP29.72■■■□□ 2.35
PKD1-218ENST00000485120 HDGFP51858 240 aaKnown RBP29.72■■■□□ 2.35
PKD1-218ENST00000485120 KDM5AP29375 1690 aaKnown RBP29.69■■■□□ 2.34
PKD1-218ENST00000485120 ZNF142P52746 1687 aaPredicted RBP29.69■■■□□ 2.34
PKD1-218ENST00000485120 ADGRB3O60242 1522 aa29.68■■■□□ 2.34
PKD1-218ENST00000485120 RPGRIP1LQ68CZ1 1315 aa29.68■■■□□ 2.34
PKD1-218ENST00000485120 CLTCL1P53675 1640 aa29.67■■■□□ 2.34
PKD1-218ENST00000485120 TMEM2Q9UHN6 1383 aa29.66■■■□□ 2.34
PKD1-218ENST00000485120 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.65■■■□□ 2.34
PKD1-218ENST00000485120 CCER1Q8TC90 406 aaPredicted RBP29.65■■■□□ 2.34
PKD1-218ENST00000485120 NEURL4Q96JN8 1562 aa29.64■■■□□ 2.34
PKD1-218ENST00000485120 ANKLE2Q86XL3 938 aa29.64■■■□□ 2.34
PKD1-218ENST00000485120 EID1Q9Y6B2 187 aa29.64■■■□□ 2.34
PKD1-218ENST00000485120 SPATA31E1Q6ZUB1 1445 aa29.63■■■□□ 2.33
PKD1-218ENST00000485120 HSPA2P54652 639 aa29.63■■■□□ 2.33
PKD1-218ENST00000485120 ZNF326Q5BKZ1 582 aaKnown RBP29.63■■■□□ 2.33
PKD1-218ENST00000485120 TMEM131LA2VDJ0 1609 aa29.63■■■□□ 2.33
PKD1-218ENST00000485120 ARHGAP23Q9P227 1491 aa29.61■■■□□ 2.33
PKD1-218ENST00000485120 STAC3Q96MF2 364 aa29.61■■■□□ 2.33
PKD1-218ENST00000485120 SLIT1O75093 1534 aa29.61■■■□□ 2.33
PKD1-218ENST00000485120 UBR1Q8IWV7 1749 aa29.6■■■□□ 2.33
PKD1-218ENST00000485120 TXNDC2Q86VQ3 553 aa29.59■■■□□ 2.33
PKD1-218ENST00000485120 SIN3AQ96ST3 1273 aa29.58■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms