RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 KDM5DQ9BY66 1539 aa19.04■□□□□ 0.64
MSH5-216ENST00000484309 DUOX2Q9NRD8 1548 aa19.04■□□□□ 0.64
MSH5-216ENST00000484309 MYO3AQ8NEV4 1616 aa19.03■□□□□ 0.64
MSH5-216ENST00000484309 FAM50AQ14320 339 aaKnown RBP19.03■□□□□ 0.64
MSH5-216ENST00000484309 CHIC2Q9UKJ5 165 aa19.02■□□□□ 0.64
MSH5-216ENST00000484309 MROH1Q8NDA8 1641 aa19.02■□□□□ 0.64
MSH5-216ENST00000484309 CFAP65Q6ZU64 1925 aaKnown RBP19.02■□□□□ 0.63
MSH5-216ENST00000484309 STRCQ7RTU9 1775 aa19.01■□□□□ 0.63
MSH5-216ENST00000484309 KIF15Q9NS87 1388 aa19.01■□□□□ 0.63
MSH5-216ENST00000484309 PTPRKQ15262 1439 aa19■□□□□ 0.63
MSH5-216ENST00000484309 ZC3H13Q5T200 1668 aaKnown RBP19■□□□□ 0.63
MSH5-216ENST00000484309 NPATQ14207 1427 aa19■□□□□ 0.63
MSH5-216ENST00000484309 ZNF142P52746 1687 aaPredicted RBP18.99■□□□□ 0.63
MSH5-216ENST00000484309 RRP7BPQ9NSQ0 103 aa18.99■□□□□ 0.63
MSH5-216ENST00000484309 PPP6R1Q9UPN7 881 aa18.99■□□□□ 0.63
MSH5-216ENST00000484309 FAM135AQ9P2D6 1515 aa18.99■□□□□ 0.63
MSH5-216ENST00000484309 ABCC3O15438 1527 aa18.97■□□□□ 0.63
MSH5-216ENST00000484309 WASHC2CQ9Y4E1 1318 aa18.97■□□□□ 0.63
MSH5-216ENST00000484309 CAMSAP1Q5T5Y3 1602 aa18.96■□□□□ 0.63
MSH5-216ENST00000484309 CEP170BQ9Y4F5 1589 aaPredicted RBP18.95■□□□□ 0.62
MSH5-216ENST00000484309 ERBINQ96RT1 1412 aa18.95■□□□□ 0.62
MSH5-216ENST00000484309 ANKRD30AQ9BXX3 1397 aa18.94■□□□□ 0.62
MSH5-216ENST00000484309 DEPDC5O75140 1603 aa18.94■□□□□ 0.62
MSH5-216ENST00000484309 PZPP20742 1482 aa18.94■□□□□ 0.62
MSH5-216ENST00000484309 FBXO31Q5XUX0 539 aaPredicted RBP18.93■□□□□ 0.62
MSH5-216ENST00000484309 PRDM15P57071 1507 aaPredicted RBP18.93■□□□□ 0.62
MSH5-216ENST00000484309 ADGRL2O95490 1459 aa18.92■□□□□ 0.62
MSH5-216ENST00000484309 NCOA1Q15788 1441 aa18.91■□□□□ 0.62
MSH5-216ENST00000484309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.89■□□□□ 0.614e-7■■□□□ 12.9
MSH5-216ENST00000484309 TNRQ92752 1358 aa18.89■□□□□ 0.61
MSH5-216ENST00000484309 A2ML1A8K2U0 1454 aa18.87■□□□□ 0.61
MSH5-216ENST00000484309 ITGAEP38570 1179 aa18.87■□□□□ 0.61
MSH5-216ENST00000484309 SPATA31D1Q6ZQQ2 1576 aa18.85■□□□□ 0.61
MSH5-216ENST00000484309 POLR1AO95602 1720 aaPredicted RBP18.84■□□□□ 0.61
MSH5-216ENST00000484309 ERVK-7P63135 1459 aa18.84■□□□□ 0.61
MSH5-216ENST00000484309 ANKRD50Q9ULJ7 1429 aa18.83■□□□□ 0.6
MSH5-216ENST00000484309 KANK1Q14678 1352 aa18.82■□□□□ 0.6
MSH5-216ENST00000484309 VWDEQ8N2E2 1590 aa18.82■□□□□ 0.6
MSH5-216ENST00000484309 NCKAP5LQ9HCH0 1330 aa18.81■□□□□ 0.6
MSH5-216ENST00000484309 PLA2R1Q13018 1463 aa18.8■□□□□ 0.6
MSH5-216ENST00000484309 NLRP1Q9C000 1473 aa18.79■□□□□ 0.6
MSH5-216ENST00000484309 ILDR1Q86SU0 546 aaPredicted RBP18.79■□□□□ 0.6
MSH5-216ENST00000484309 DMRT2Q9Y5R5 561 aa18.79■□□□□ 0.6
MSH5-216ENST00000484309 UNC13BO14795 1591 aa18.79■□□□□ 0.6
MSH5-216ENST00000484309 UGGT1Q9NYU2 1555 aa18.79■□□□□ 0.6
MSH5-216ENST00000484309 PTPRTO14522 1441 aa18.78■□□□□ 0.6
MSH5-216ENST00000484309 RRBP1Q9P2E9 1410 aaKnown RBP18.78■□□□□ 0.6
MSH5-216ENST00000484309 LMTK2Q8IWU2 1503 aa18.78■□□□□ 0.6
MSH5-216ENST00000484309 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.78■□□□□ 0.6
MSH5-216ENST00000484309 UBR1Q8IWV7 1749 aa18.77■□□□□ 0.6
MSH5-216ENST00000484309 EFCAB6Q5THR3 1501 aa18.77■□□□□ 0.6
MSH5-216ENST00000484309 ROCK1Q13464 1354 aa18.77■□□□□ 0.6
MSH5-216ENST00000484309 GCC2Q8IWJ2 1684 aa18.76■□□□□ 0.59
MSH5-216ENST00000484309 ARHGAP31Q2M1Z3 1444 aa18.76■□□□□ 0.59
MSH5-216ENST00000484309 TET3O43151 1660 aa18.76■□□□□ 0.59
MSH5-216ENST00000484309 NEURL4Q96JN8 1562 aa18.75■□□□□ 0.59
MSH5-216ENST00000484309 PIK3C2BO00750 1634 aa18.74■□□□□ 0.59
MSH5-216ENST00000484309 SYNMO15061 1565 aa18.73■□□□□ 0.59
MSH5-216ENST00000484309 IQGAP3Q86VI3 1631 aa18.71■□□□□ 0.59
MSH5-216ENST00000484309 E9PCH4 1651 aa18.71■□□□□ 0.59
MSH5-216ENST00000484309 PKD2Q13563 968 aa18.71■□□□□ 0.59
MSH5-216ENST00000484309 MYO5BQ9ULV0 1848 aa18.7■□□□□ 0.58
MSH5-216ENST00000484309 THEMISQ8N1K5 641 aaPredicted RBP18.69■□□□□ 0.58
MSH5-216ENST00000484309 CERKQ8TCT0 537 aa18.69■□□□□ 0.58
MSH5-216ENST00000484309 LTBP4Q8N2S1 1624 aa18.69■□□□□ 0.58
MSH5-216ENST00000484309 IQGAP1P46940 1657 aa18.68■□□□□ 0.58
MSH5-216ENST00000484309 FBXO41Q8TF61 875 aa18.66■□□□□ 0.58
MSH5-216ENST00000484309 ZNF335Q9H4Z2 1342 aaPredicted RBP18.65■□□□□ 0.58
MSH5-216ENST00000484309 NOS1P29475 1434 aa18.65■□□□□ 0.58
MSH5-216ENST00000484309 KDM5AP29375 1690 aaKnown RBP18.64■□□□□ 0.57
MSH5-216ENST00000484309 ANKLE2Q86XL3 938 aa18.64■□□□□ 0.57
MSH5-216ENST00000484309 RPRD2Q5VT52 1461 aaKnown RBP18.64■□□□□ 0.57
MSH5-216ENST00000484309 NUP155O75694 1391 aa18.63■□□□□ 0.57
MSH5-216ENST00000484309 NPHP4O75161 1426 aaPredicted RBP18.63■□□□□ 0.57
MSH5-216ENST00000484309 NAIPQ13075 1403 aa18.62■□□□□ 0.57
MSH5-216ENST00000484309 ADGRB3O60242 1522 aa18.62■□□□□ 0.57
MSH5-216ENST00000484309 IDI1Q13907 227 aa18.61■□□□□ 0.57
MSH5-216ENST00000484309 STAG3Q9UJ98 1225 aa18.61■□□□□ 0.57
MSH5-216ENST00000484309 SLIT1O75093 1534 aa18.6■□□□□ 0.57
MSH5-216ENST00000484309 MED14O60244 1454 aa18.6■□□□□ 0.57
MSH5-216ENST00000484309 ARHGAP23Q9P227 1491 aa18.6■□□□□ 0.57
MSH5-216ENST00000484309 SPHKAPQ2M3C7 1700 aa18.6■□□□□ 0.57
MSH5-216ENST00000484309 SCAF11Q99590 1463 aaKnown RBP18.59■□□□□ 0.57
MSH5-216ENST00000484309 STRCP1A6NGW2 1772 aa18.58■□□□□ 0.57
MSH5-216ENST00000484309 LTKP29376 864 aa18.56■□□□□ 0.56
MSH5-216ENST00000484309 HFM1A2PYH4 1435 aa18.56■□□□□ 0.56
MSH5-216ENST00000484309 TMEM131LA2VDJ0 1609 aa18.56■□□□□ 0.56
MSH5-216ENST00000484309 TXNDC2Q86VQ3 553 aa18.55■□□□□ 0.56
MSH5-216ENST00000484309 TMEM2Q9UHN6 1383 aa18.55■□□□□ 0.56
MSH5-216ENST00000484309 SLC52A1Q9NWF4 448 aa18.53■□□□□ 0.56
MSH5-216ENST00000484309 EID1Q9Y6B2 187 aa18.52■□□□□ 0.56
MSH5-216ENST00000484309 IQSEC2Q5JU85 1478 aa18.52■□□□□ 0.55
MSH5-216ENST00000484309 CHGAP10645 457 aaKnown RBP18.51■□□□□ 0.55
MSH5-216ENST00000484309 CPS1P31327 1500 aa18.5■□□□□ 0.55
MSH5-216ENST00000484309 TRIM52Q96A61 297 aa18.5■□□□□ 0.55
MSH5-216ENST00000484309 SENP3Q9H4L4 574 aaPredicted RBP18.5■□□□□ 0.55
MSH5-216ENST00000484309 CLTCL1P53675 1640 aa18.48■□□□□ 0.55
MSH5-216ENST00000484309 RIMS2Q9UQ26 1411 aa18.47■□□□□ 0.55
MSH5-216ENST00000484309 KIF1BO60333 1816 aa18.46■□□□□ 0.55
MSH5-216ENST00000484309 ZFYVE9O95405 1425 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms