RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 POLR1AO95602 1720 aaPredicted RBP20.74■□□□□ 0.91
DNMT3A-213ENST00000484184 SHANK2Q9UPX8 1470 aa20.73■□□□□ 0.91
DNMT3A-213ENST00000484184 CPS1P31327 1500 aa20.73■□□□□ 0.91
DNMT3A-213ENST00000484184 TNRQ92752 1358 aa20.72■□□□□ 0.91
DNMT3A-213ENST00000484184 MED1Q15648 1581 aaPredicted RBP20.72■□□□□ 0.91
DNMT3A-213ENST00000484184 PZPP20742 1482 aa20.71■□□□□ 0.91
DNMT3A-213ENST00000484184 VWDEQ8N2E2 1590 aa20.7■□□□□ 0.9
DNMT3A-213ENST00000484184 ALKQ9UM73 1620 aa20.7■□□□□ 0.9
DNMT3A-213ENST00000484184 KIF3BO15066 747 aa20.69■□□□□ 0.9
DNMT3A-213ENST00000484184 PIP4K2BP78356 416 aa20.69■□□□□ 0.9
DNMT3A-213ENST00000484184 CEP162Q5TB80 1403 aa20.69■□□□□ 0.9
DNMT3A-213ENST00000484184 EHBP1L1Q8N3D4 1523 aa20.68■□□□□ 0.9
DNMT3A-213ENST00000484184 KDM5DQ9BY66 1539 aa20.68■□□□□ 0.9
DNMT3A-213ENST00000484184 FAM135AQ9P2D6 1515 aa20.68■□□□□ 0.9
DNMT3A-213ENST00000484184 TOM1O60784 492 aa20.68■□□□□ 0.9
DNMT3A-213ENST00000484184 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.68■□□□□ 0.9
DNMT3A-213ENST00000484184 SCAF1Q9H7N4 1312 aaKnown RBP20.66■□□□□ 0.9
DNMT3A-213ENST00000484184 MED14O60244 1454 aa20.66■□□□□ 0.9
DNMT3A-213ENST00000484184 MIA2Q96PC5 1412 aa20.65■□□□□ 0.9
DNMT3A-213ENST00000484184 ANKLE2Q86XL3 938 aa20.65■□□□□ 0.9
DNMT3A-213ENST00000484184 CCDC141Q6ZP82 1450 aa20.64■□□□□ 0.89
DNMT3A-213ENST00000484184 WASHC2CQ9Y4E1 1318 aa20.63■□□□□ 0.89
DNMT3A-213ENST00000484184 THEMISQ8N1K5 641 aaPredicted RBP20.63■□□□□ 0.89
DNMT3A-213ENST00000484184 DEPDC5O75140 1603 aa20.63■□□□□ 0.89
DNMT3A-213ENST00000484184 NLRP1Q9C000 1473 aa20.62■□□□□ 0.89
DNMT3A-213ENST00000484184 CAMSAP2Q08AD1 1489 aa20.62■□□□□ 0.89
DNMT3A-213ENST00000484184 NPHP4O75161 1426 aaPredicted RBP20.61■□□□□ 0.89
DNMT3A-213ENST00000484184 UGGT1Q9NYU2 1555 aa20.61■□□□□ 0.89
DNMT3A-213ENST00000484184 RSPH4AQ5TD94 716 aa20.59■□□□□ 0.89
DNMT3A-213ENST00000484184 STRCP1A6NGW2 1772 aa20.59■□□□□ 0.89
DNMT3A-213ENST00000484184 NCOA2Q15596 1464 aa20.58■□□□□ 0.89
DNMT3A-213ENST00000484184 IQGAP1P46940 1657 aa20.56■□□□□ 0.88
DNMT3A-213ENST00000484184 ARHGEF5Q12774 1597 aa20.55■□□□□ 0.88
DNMT3A-213ENST00000484184 LRRC7Q96NW7 1537 aa20.55■□□□□ 0.88
DNMT3A-213ENST00000484184 RNF17Q9BXT8 1623 aaKnown RBP20.53■□□□□ 0.88
DNMT3A-213ENST00000484184 ABCC3O15438 1527 aa20.53■□□□□ 0.88
DNMT3A-213ENST00000484184 ERVK-7P63135 1459 aa20.5■□□□□ 0.87
DNMT3A-213ENST00000484184 ZC3H13Q5T200 1668 aaKnown RBP20.49■□□□□ 0.87
DNMT3A-213ENST00000484184 MROH1Q8NDA8 1641 aa20.49■□□□□ 0.87
DNMT3A-213ENST00000484184 SYNMO15061 1565 aa20.48■□□□□ 0.87
DNMT3A-213ENST00000484184 TSPY4P0CV99 314 aa20.48■□□□□ 0.87
DNMT3A-213ENST00000484184 TSPY10P0CW01 314 aa20.48■□□□□ 0.87
DNMT3A-213ENST00000484184 PHF23Q9BUL5 403 aaPredicted RBP20.48■□□□□ 0.87
DNMT3A-213ENST00000484184 MAST1Q9Y2H9 1570 aa20.47■□□□□ 0.87
DNMT3A-213ENST00000484184 UBR1Q8IWV7 1749 aa20.44■□□□□ 0.86
DNMT3A-213ENST00000484184 SENP3Q9H4L4 574 aaPredicted RBP20.44■□□□□ 0.86
DNMT3A-213ENST00000484184 CFAP65Q6ZU64 1925 aaKnown RBP20.44■□□□□ 0.86
DNMT3A-213ENST00000484184 EIF2AK4Q9P2K8 1649 aaKnown RBP20.44■□□□□ 0.86
DNMT3A-213ENST00000484184 RGS17Q9UGC6 210 aaPredicted RBP20.43■□□□□ 0.86
DNMT3A-213ENST00000484184 LTKP29376 864 aa20.42■□□□□ 0.86
DNMT3A-213ENST00000484184 SCAF11Q99590 1463 aaKnown RBP20.42■□□□□ 0.86
DNMT3A-213ENST00000484184 ARHGAP23Q9P227 1491 aa20.42■□□□□ 0.86
DNMT3A-213ENST00000484184 XIRP1Q702N8 1843 aaKnown RBP20.41■□□□□ 0.86
DNMT3A-213ENST00000484184 CEP152O94986 1710 aa20.41■□□□□ 0.86
DNMT3A-213ENST00000484184 SLIT1O75093 1534 aa20.4■□□□□ 0.86
DNMT3A-213ENST00000484184 LRRC9Q6ZRR7 1453 aa20.39■□□□□ 0.85
DNMT3A-213ENST00000484184 TXNDC2Q86VQ3 553 aa20.36■□□□□ 0.85
DNMT3A-213ENST00000484184 ARHGAP31Q2M1Z3 1444 aa20.36■□□□□ 0.85
DNMT3A-213ENST00000484184 DUOX2Q9NRD8 1548 aa20.34■□□□□ 0.85
DNMT3A-213ENST00000484184 PRDM15P57071 1507 aaPredicted RBP20.32■□□□□ 0.84
DNMT3A-213ENST00000484184 KANK4Q5T7N3 995 aaPredicted RBP20.32■□□□□ 0.84
DNMT3A-213ENST00000484184 FAM135BQ49AJ0 1406 aa20.32■□□□□ 0.84
DNMT3A-213ENST00000484184 MYOM3Q5VTT5 1437 aa20.3■□□□□ 0.84
DNMT3A-213ENST00000484184 VPS8Q8N3P4 1428 aa20.3■□□□□ 0.84
DNMT3A-213ENST00000484184 PIK3C2BO00750 1634 aa20.3■□□□□ 0.84
DNMT3A-213ENST00000484184 TMEM2Q9UHN6 1383 aa20.3■□□□□ 0.84
DNMT3A-213ENST00000484184 TMEM94Q12767 1356 aa20.27■□□□□ 0.84
DNMT3A-213ENST00000484184 KIF15Q9NS87 1388 aa20.27■□□□□ 0.84
DNMT3A-213ENST00000484184 EID1Q9Y6B2 187 aa20.27■□□□□ 0.84
DNMT3A-213ENST00000484184 MAP3K1Q13233 1512 aa20.27■□□□□ 0.83
DNMT3A-213ENST00000484184 ERBINQ96RT1 1412 aa20.27■□□□□ 0.83
DNMT3A-213ENST00000484184 POTEAQ6S8J7 498 aa20.26■□□□□ 0.83
DNMT3A-213ENST00000484184 ABCC5O15440 1437 aa20.26■□□□□ 0.83
DNMT3A-213ENST00000484184 TET3O43151 1660 aa20.25■□□□□ 0.83
DNMT3A-213ENST00000484184 KDM5AP29375 1690 aaKnown RBP20.23■□□□□ 0.83
DNMT3A-213ENST00000484184 KCNA6P17658 529 aa20.23■□□□□ 0.83
DNMT3A-213ENST00000484184 RRP7BPQ9NSQ0 103 aa20.23■□□□□ 0.83
DNMT3A-213ENST00000484184 IDI1Q13907 227 aa20.22■□□□□ 0.83
DNMT3A-213ENST00000484184 CROCC2H7BZ55 1655 aa20.22■□□□□ 0.83
DNMT3A-213ENST00000484184 ROBO1Q9Y6N7 1651 aa20.22■□□□□ 0.83
DNMT3A-213ENST00000484184 EFCAB6Q5THR3 1501 aa20.22■□□□□ 0.83
DNMT3A-213ENST00000484184 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.839e-8■□□□□ 10.2
DNMT3A-213ENST00000484184 RBM33Q96EV2 1170 aaKnown RBP20.2■□□□□ 0.82
DNMT3A-213ENST00000484184 SLC26A8Q96RN1 970 aa20.2■□□□□ 0.82
DNMT3A-213ENST00000484184 LMTK2Q8IWU2 1503 aa20.2■□□□□ 0.82
DNMT3A-213ENST00000484184 NOS1P29475 1434 aa20.18■□□□□ 0.82
DNMT3A-213ENST00000484184 PROSER2Q86WR7 435 aaPredicted RBP20.17■□□□□ 0.82
DNMT3A-213ENST00000484184 STAG3Q9UJ98 1225 aa20.17■□□□□ 0.82
DNMT3A-213ENST00000484184 NWD1Q149M9 1564 aa20.17■□□□□ 0.82
DNMT3A-213ENST00000484184 DAPK1P53355 1430 aa20.16■□□□□ 0.82
DNMT3A-213ENST00000484184 PTPN23Q9H3S7 1636 aa20.16■□□□□ 0.82
DNMT3A-213ENST00000484184 LOC105371045A0A1W2PR82 267 aa20.15■□□□□ 0.82
DNMT3A-213ENST00000484184 KANK1Q14678 1352 aa20.15■□□□□ 0.82
DNMT3A-213ENST00000484184 NKTRP30414 1462 aaKnown RBP20.15■□□□□ 0.82
DNMT3A-213ENST00000484184 ADGRB3O60242 1522 aa20.12■□□□□ 0.81
DNMT3A-213ENST00000484184 SLAIN2Q9P270 581 aa20.1■□□□□ 0.81
DNMT3A-213ENST00000484184 SETD1AO15047 1707 aaKnown RBP20.09■□□□□ 0.81
DNMT3A-213ENST00000484184 FGD6Q6ZV73 1430 aa20.09■□□□□ 0.81
DNMT3A-213ENST00000484184 MSH6P52701 1360 aa20.08■□□□□ 0.81
DNMT3A-213ENST00000484184 ANKRD30AQ9BXX3 1397 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms