RNA–Protein interactions for RNA: ENST00000484160.1

SH2D3C-211, Transcript of SH2 domain containing 3C, humanhuman

TSL 2

Gene SH2D3C, Length 463 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3C-211ENST00000484160 RIMS1Q86UR5 1692 aaKnown RBP29.66■■■□□ 2.34
SH2D3C-211ENST00000484160 CNTLNQ9NXG0 1405 aa29.65■■■□□ 2.34
SH2D3C-211ENST00000484160 RNF17Q9BXT8 1623 aaKnown RBP29.61■■■□□ 2.33
SH2D3C-211ENST00000484160 KANK1Q14678 1352 aa29.61■■■□□ 2.33
SH2D3C-211ENST00000484160 WASHC2CQ9Y4E1 1318 aa29.6■■■□□ 2.33
SH2D3C-211ENST00000484160 FAM135AQ9P2D6 1515 aa29.6■■■□□ 2.33
SH2D3C-211ENST00000484160 PTPRMP28827 1452 aa29.58■■■□□ 2.33
SH2D3C-211ENST00000484160 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.57■■■□□ 2.32
SH2D3C-211ENST00000484160 PLPPR3Q6T4P5 718 aa29.56■■■□□ 2.32
SH2D3C-211ENST00000484160 KDM5DQ9BY66 1539 aa29.55■■■□□ 2.32
SH2D3C-211ENST00000484160 CLTCQ00610 1675 aaKnown RBP29.55■■■□□ 2.32
SH2D3C-211ENST00000484160 GCC2Q8IWJ2 1684 aa29.53■■■□□ 2.32
SH2D3C-211ENST00000484160 MROH2AA6NES4 1674 aa29.53■■■□□ 2.32
SH2D3C-211ENST00000484160 HFM1A2PYH4 1435 aa29.53■■■□□ 2.32
SH2D3C-211ENST00000484160 ZC3H13Q5T200 1668 aaKnown RBP29.52■■■□□ 2.32
SH2D3C-211ENST00000484160 DEPDC5O75140 1603 aa29.51■■■□□ 2.31
SH2D3C-211ENST00000484160 PRDM15P57071 1507 aaPredicted RBP29.5■■■□□ 2.31
SH2D3C-211ENST00000484160 NAIPQ13075 1403 aa29.5■■■□□ 2.31
SH2D3C-211ENST00000484160 ZMYM3Q14202 1370 aa29.48■■■□□ 2.31
SH2D3C-211ENST00000484160 MROH1Q8NDA8 1641 aa29.45■■■□□ 2.31
SH2D3C-211ENST00000484160 C3P01024 1663 aa29.44■■■□□ 2.3
SH2D3C-211ENST00000484160 ABCC3O15438 1527 aa29.44■■■□□ 2.3
SH2D3C-211ENST00000484160 CEBPAP49715 358 aaPredicted RBP29.43■■■□□ 2.3
SH2D3C-211ENST00000484160 UNC13BO14795 1591 aa29.43■■■□□ 2.3
SH2D3C-211ENST00000484160 ACIN1Q9UKV3 1341 aaKnown RBP29.43■■■□□ 2.3
SH2D3C-211ENST00000484160 CEP152O94986 1710 aa29.42■■■□□ 2.3
SH2D3C-211ENST00000484160 NUP155O75694 1391 aa29.39■■■□□ 2.3
SH2D3C-211ENST00000484160 TRIM26Q12899 539 aaPredicted RBP29.38■■■□□ 2.29
SH2D3C-211ENST00000484160 TRIM52Q96A61 297 aa29.38■■■□□ 2.29
SH2D3C-211ENST00000484160 CAMSAP1Q5T5Y3 1602 aa29.38■■■□□ 2.29
SH2D3C-211ENST00000484160 SETD5Q9C0A6 1442 aa29.37■■■□□ 2.29
SH2D3C-211ENST00000484160 PZPP20742 1482 aa29.36■■■□□ 2.29
SH2D3C-211ENST00000484160 NPATQ14207 1427 aa29.35■■■□□ 2.29
SH2D3C-211ENST00000484160 VWDEQ8N2E2 1590 aa29.35■■■□□ 2.29
SH2D3C-211ENST00000484160 LMTK2Q8IWU2 1503 aa29.34■■■□□ 2.29
SH2D3C-211ENST00000484160 IQGAP3Q86VI3 1631 aa29.31■■■□□ 2.28
SH2D3C-211ENST00000484160 SETD1BQ9UPS6 1966 aaKnown RBP29.31■■■□□ 2.28
SH2D3C-211ENST00000484160 TET3O43151 1660 aa29.3■■■□□ 2.28
SH2D3C-211ENST00000484160 ARHGAP31Q2M1Z3 1444 aa29.29■■■□□ 2.28
SH2D3C-211ENST00000484160 EFCAB6Q5THR3 1501 aa29.27■■■□□ 2.28
SH2D3C-211ENST00000484160 UHRF1BP1Q6BDS2 1440 aa29.27■■■□□ 2.28
SH2D3C-211ENST00000484160 PREX1Q8TCU6 1659 aa29.26■■■□□ 2.27
SH2D3C-211ENST00000484160 TNRQ92752 1358 aa29.25■■■□□ 2.27
SH2D3C-211ENST00000484160 RAB3GAP2Q9H2M9 1393 aa29.25■■■□□ 2.27
SH2D3C-211ENST00000484160 RPRD2Q5VT52 1461 aaKnown RBP29.24■■■□□ 2.27
SH2D3C-211ENST00000484160 FBXO31Q5XUX0 539 aaPredicted RBP29.24■■■□□ 2.27
SH2D3C-211ENST00000484160 CFAP65Q6ZU64 1925 aaKnown RBP29.23■■■□□ 2.27
SH2D3C-211ENST00000484160 SLC4A1APQ9BWU0 796 aaKnown RBP29.21■■■□□ 2.27
SH2D3C-211ENST00000484160 ERVK-7P63135 1459 aa29.21■■■□□ 2.27
SH2D3C-211ENST00000484160 SPATA31D1Q6ZQQ2 1576 aa29.18■■■□□ 2.26
SH2D3C-211ENST00000484160 HRCP23327 699 aa29.18■■■□□ 2.26
SH2D3C-211ENST00000484160 MYO3AQ8NEV4 1616 aa29.16■■■□□ 2.26
SH2D3C-211ENST00000484160 NLRP1Q9C000 1473 aa29.15■■■□□ 2.26
SH2D3C-211ENST00000484160 E9PCH4 1651 aa29.15■■■□□ 2.26
SH2D3C-211ENST00000484160 LMTK3Q96Q04 1460 aa29.11■■■□□ 2.25
SH2D3C-211ENST00000484160 PKD2Q13563 968 aa29.11■■■□□ 2.25
SH2D3C-211ENST00000484160 CEP170BQ9Y4F5 1589 aaPredicted RBP29.09■■■□□ 2.25
SH2D3C-211ENST00000484160 MPHOSPH9Q99550 1183 aa29.09■■■□□ 2.25
SH2D3C-211ENST00000484160 STAG3Q9UJ98 1225 aa29.09■■■□□ 2.25
SH2D3C-211ENST00000484160 A2ML1A8K2U0 1454 aa29.09■■■□□ 2.25
SH2D3C-211ENST00000484160 SLC52A1Q9NWF4 448 aa29.08■■■□□ 2.25
SH2D3C-211ENST00000484160 NOS1P29475 1434 aa29.08■■■□□ 2.25
SH2D3C-211ENST00000484160 ZNF142P52746 1687 aaPredicted RBP29.08■■■□□ 2.25
SH2D3C-211ENST00000484160 SPHKAPQ2M3C7 1700 aa29.03■■■□□ 2.24
SH2D3C-211ENST00000484160 THEMISQ8N1K5 641 aaPredicted RBP29.03■■■□□ 2.24
SH2D3C-211ENST00000484160 UGGT1Q9NYU2 1555 aa29.02■■■□□ 2.24
SH2D3C-211ENST00000484160 HSPA2P54652 639 aa29.02■■■□□ 2.24
SH2D3C-211ENST00000484160 SYNMO15061 1565 aa29.01■■■□□ 2.24
SH2D3C-211ENST00000484160 IDI1Q13907 227 aa28.98■■■□□ 2.23
SH2D3C-211ENST00000484160 PTPRTO14522 1441 aa28.96■■■□□ 2.23
SH2D3C-211ENST00000484160 CHGAP10645 457 aaKnown RBP28.96■■■□□ 2.23
SH2D3C-211ENST00000484160 PCGF6Q9BYE7 350 aa28.96■■■□□ 2.23
SH2D3C-211ENST00000484160 PIK3C2BO00750 1634 aa28.95■■■□□ 2.23
SH2D3C-211ENST00000484160 TRPM2O94759 1503 aa28.94■■■□□ 2.22
SH2D3C-211ENST00000484160 FOXD1Q16676 465 aa28.93■■■□□ 2.22
SH2D3C-211ENST00000484160 KDM5AP29375 1690 aaKnown RBP28.93■■■□□ 2.22
SH2D3C-211ENST00000484160 UBR1Q8IWV7 1749 aa28.92■■■□□ 2.22
SH2D3C-211ENST00000484160 ADGRB3O60242 1522 aa28.9■■■□□ 2.22
SH2D3C-211ENST00000484160 PLA2R1Q13018 1463 aa28.9■■■□□ 2.22
SH2D3C-211ENST00000484160 CCDC144AA2RUR9 1427 aa28.88■■■□□ 2.21
SH2D3C-211ENST00000484160 ANKLE2Q86XL3 938 aa28.88■■■□□ 2.21
SH2D3C-211ENST00000484160 DMRT2Q9Y5R5 561 aa28.88■■■□□ 2.21
SH2D3C-211ENST00000484160 EID1Q9Y6B2 187 aa28.88■■■□□ 2.21
SH2D3C-211ENST00000484160 HDGFP51858 240 aaKnown RBP28.87■■■□□ 2.21
SH2D3C-211ENST00000484160 KIF1BO60333 1816 aa28.85■■■□□ 2.21
SH2D3C-211ENST00000484160 CLTCL1P53675 1640 aa28.83■■■□□ 2.21
SH2D3C-211ENST00000484160 ZNF326Q5BKZ1 582 aaKnown RBP28.82■■■□□ 2.2
SH2D3C-211ENST00000484160 TMEM131LA2VDJ0 1609 aa28.81■■■□□ 2.2
SH2D3C-211ENST00000484160 TMEM2Q9UHN6 1383 aa28.8■■■□□ 2.2
SH2D3C-211ENST00000484160 POLR1AO95602 1720 aaPredicted RBP28.8■■■□□ 2.2
SH2D3C-211ENST00000484160 NCKAP5LQ9HCH0 1330 aa28.79■■■□□ 2.2
SH2D3C-211ENST00000484160 TXNDC2Q86VQ3 553 aa28.79■■■□□ 2.2
SH2D3C-211ENST00000484160 PPP1R15AO75807 674 aaPredicted RBP28.78■■■□□ 2.2
SH2D3C-211ENST00000484160 SLIT1O75093 1534 aa28.78■■■□□ 2.2
SH2D3C-211ENST00000484160 MYO5BQ9ULV0 1848 aa28.78■■■□□ 2.2
SH2D3C-211ENST00000484160 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.77■■■□□ 2.2
SH2D3C-211ENST00000484160 STRCQ7RTU9 1775 aa28.77■■■□□ 2.2
SH2D3C-211ENST00000484160 SCAF11Q99590 1463 aaKnown RBP28.75■■■□□ 2.19
SH2D3C-211ENST00000484160 ARHGAP23Q9P227 1491 aa28.75■■■□□ 2.19
SH2D3C-211ENST00000484160 ANKRD30BQ9BXX2 1392 aa28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms