RNA–Protein interactions for RNA: ENST00000483868.5

TPRA1-208, Transcript of transmembrane protein adipocyte associated 1, human

TSL 5

Gene TPRA1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPRA1-208	ENST00000483868	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	41.24	■■■■■ 4.19
TPRA1-208	ENST00000483868	MROH1	Q8NDA8	1641 aa		41.21	■■■■■ 4.19
TPRA1-208	ENST00000483868	RNF17	Q9BXT8	1623 aa	Known RBP	41.2	■■■■■ 4.19
TPRA1-208	ENST00000483868	DEPDC5	O75140	1603 aa		41.19	■■■■■ 4.18
TPRA1-208	ENST00000483868	UNC13B	O14795	1591 aa		41.16	■■■■■ 4.18
TPRA1-208	ENST00000483868	TRIM52	Q96A61	297 aa		41.15	■■■■■ 4.18
TPRA1-208	ENST00000483868	HRC	P23327	699 aa		41.14	■■■■■ 4.18
TPRA1-208	ENST00000483868	NUP155	O75694	1391 aa		41.12	■■■■■ 4.17
TPRA1-208	ENST00000483868	PRDM15	P57071	1507 aa	Predicted RBP	41.12	■■■■■ 4.17
TPRA1-208	ENST00000483868	VWDE	Q8N2E2	1590 aa		41.05	■■■■■ 4.16
TPRA1-208	ENST00000483868	WASHC2C	Q9Y4E1	1318 aa		41.02	■■■■■ 4.16
TPRA1-208	ENST00000483868	PZP	P20742	1482 aa		41.01	■■■■■ 4.16
TPRA1-208	ENST00000483868	KDM5D	Q9BY66	1539 aa		41.01	■■■■■ 4.16
TPRA1-208	ENST00000483868	KANK1	Q14678	1352 aa		41.01	■■■■■ 4.15
TPRA1-208	ENST00000483868	FAM135A	Q9P2D6	1515 aa		41	■■■■■ 4.15
TPRA1-208	ENST00000483868	IQGAP3	Q86VI3	1631 aa		41	■■■■■ 4.15
TPRA1-208	ENST00000483868	CEP152	O94986	1710 aa		40.98	■■■■■ 4.15
TPRA1-208	ENST00000483868	ABCC3	O15438	1527 aa		40.98	■■■■■ 4.15
TPRA1-208	ENST00000483868	PPP6R1	Q9UPN7	881 aa		40.96	■■■■■ 4.15
TPRA1-208	ENST00000483868	MPHOSPH9	Q99550	1183 aa		40.93	■■■■■ 4.14
TPRA1-208	ENST00000483868	SLC4A1AP	Q9BWU0	796 aa	Known RBP	40.93	■■■■■ 4.14
TPRA1-208	ENST00000483868	ADAMTSL3	P82987	1691 aa		40.93	■■■■■ 4.14
TPRA1-208	ENST00000483868	CLTC	Q00610	1675 aa	Known RBP	40.93	■■■■■ 4.14
TPRA1-208	ENST00000483868	ACIN1	Q9UKV3	1341 aa	Known RBP	40.91	■■■■■ 4.14
TPRA1-208	ENST00000483868	MADD	Q8WXG6	1647 aa		40.9	■■■■■ 4.14
TPRA1-208	ENST00000483868	LMTK2	Q8IWU2	1503 aa		40.9	■■■■■ 4.14
TPRA1-208	ENST00000483868	FER1L4	A9Z1Z3	1794 aa		40.89	■■■■■ 4.14
TPRA1-208	ENST00000483868	ESF1	Q9H501	851 aa	Known RBP	40.88	■■■■■ 4.13
TPRA1-208	ENST00000483868	ZC3H13	Q5T200	1668 aa	Known RBP	40.87	■■■■■ 4.13
TPRA1-208	ENST00000483868	FOXD1	Q16676	465 aa		40.84	■■■■■ 4.13
TPRA1-208	ENST00000483868	TET3	O43151	1660 aa		40.84	■■■■■ 4.13
TPRA1-208	ENST00000483868	PKD2	Q13563	968 aa		40.84	■■■■■ 4.13
TPRA1-208	ENST00000483868	CAMSAP1	Q5T5Y3	1602 aa		40.83	■■■■■ 4.13
TPRA1-208	ENST00000483868	DHX57	Q6P158	1386 aa	Known RBP	40.82	■■■■■ 4.13
TPRA1-208	ENST00000483868	EFCAB6	Q5THR3	1501 aa		40.81	■■■■■ 4.12
TPRA1-208	ENST00000483868	ZMYM3	Q14202	1370 aa		40.8	■■■■■ 4.12
TPRA1-208	ENST00000483868	KDM4F	A0A1W2PPD8	638 aa		40.8	■■■■■ 4.12
TPRA1-208	ENST00000483868	CNTLN	Q9NXG0	1405 aa		40.8	■■■■■ 4.12
TPRA1-208	ENST00000483868	RIMS1	Q86UR5	1692 aa	Known RBP	40.79	■■■■■ 4.12
TPRA1-208	ENST00000483868	NPAT	Q14207	1427 aa		40.78	■■■■■ 4.12
TPRA1-208	ENST00000483868		E9PCH4	1651 aa		40.78	■■■■■ 4.12
TPRA1-208	ENST00000483868	CEBPA	P49715	358 aa	Predicted RBP	40.76	■■■■■ 4.11
TPRA1-208	ENST00000483868	CFAP65	Q6ZU64	1925 aa	Known RBP	40.74	■■■■■ 4.11
TPRA1-208	ENST00000483868	MROH2A	A6NES4	1674 aa		40.72	■■■■■ 4.11
TPRA1-208	ENST00000483868	PLPPR3	Q6T4P5	718 aa		40.72	■■■■■ 4.11
TPRA1-208	ENST00000483868	ARHGAP31	Q2M1Z3	1444 aa		40.72	■■■■■ 4.11
TPRA1-208	ENST00000483868	FBXO31	Q5XUX0	539 aa	Predicted RBP	40.71	■■■■■ 4.11
TPRA1-208	ENST00000483868	C3	P01024	1663 aa		40.68	■■■■■ 4.1
TPRA1-208	ENST00000483868	RPRD2	Q5VT52	1461 aa	Known RBP	40.64	■■■■■ 4.1
TPRA1-208	ENST00000483868	PTPRM	P28827	1452 aa		40.63	■■■■■ 4.09
TPRA1-208	ENST00000483868	PLA2R1	Q13018	1463 aa		40.61	■■■■■ 4.09
TPRA1-208	ENST00000483868	PREX1	Q8TCU6	1659 aa		40.58	■■■■■ 4.09
TPRA1-208	ENST00000483868	ERVK-7	P63135	1459 aa		40.58	■■■■■ 4.09
TPRA1-208	ENST00000483868	NOS1	P29475	1434 aa		40.57	■■■■■ 4.08
TPRA1-208	ENST00000483868	ANKRD30B	Q9BXX2	1392 aa		40.56	■■■■■ 4.08
TPRA1-208	ENST00000483868	PTPRT	O14522	1441 aa		40.56	■■■■■ 4.08
TPRA1-208	ENST00000483868	CCER1	Q8TC90	406 aa	Predicted RBP	40.54	■■■■■ 4.08
TPRA1-208	ENST00000483868	SPHKAP	Q2M3C7	1700 aa		40.53	■■■■■ 4.08
TPRA1-208	ENST00000483868	SPATA31D1	Q6ZQQ2	1576 aa		40.53	■■■■■ 4.08
TPRA1-208	ENST00000483868	SYNM	O15061	1565 aa		40.51	■■■■■ 4.08
TPRA1-208	ENST00000483868	UGGT1	Q9NYU2	1555 aa		40.48	■■■■■ 4.07
TPRA1-208	ENST00000483868	TRPM2	O94759	1503 aa		40.46	■■■■■ 4.07
TPRA1-208	ENST00000483868	TNR	Q92752	1358 aa		40.44	■■■■■ 4.06
TPRA1-208	ENST00000483868	SIN3A	Q96ST3	1273 aa		40.42	■■■■■ 4.06
TPRA1-208	ENST00000483868	CLTCL1	P53675	1640 aa		40.39	■■■■■ 4.06
TPRA1-208	ENST00000483868	IDI1	Q13907	227 aa		40.39	■■■■■ 4.06
TPRA1-208	ENST00000483868	CCDC144A	A2RUR9	1427 aa		40.37	■■■■■ 4.05
TPRA1-208	ENST00000483868	PIK3C2B	O00750	1634 aa		40.35	■■■■■ 4.05
TPRA1-208	ENST00000483868	SLC52A1	Q9NWF4	448 aa		40.33	■■■■■ 4.05
TPRA1-208	ENST00000483868	NEUROD1	Q13562	356 aa		40.31	■■■■■ 4.04
TPRA1-208	ENST00000483868	SETD1B	Q9UPS6	1966 aa	Known RBP	40.3	■■■■■ 4.04
TPRA1-208	ENST00000483868	CLSPN	Q9HAW4	1339 aa		40.28	■■■■■ 4.04
TPRA1-208	ENST00000483868	MYO3A	Q8NEV4	1616 aa		40.26	■■■■■ 4.04
TPRA1-208	ENST00000483868	NLRP1	Q9C000	1473 aa		40.24	■■■■■ 4.03
TPRA1-208	ENST00000483868	CHGA	P10645	457 aa	Known RBP	40.23	■■■■■ 4.03
TPRA1-208	ENST00000483868	KIF1B	O60333	1816 aa		40.17	■■■■■ 4.02
TPRA1-208	ENST00000483868	SPATA31E1	Q6ZUB1	1445 aa		40.17	■■■■■ 4.02
TPRA1-208	ENST00000483868	TMEM131L	A2VDJ0	1609 aa		40.17	■■■■■ 4.02
TPRA1-208	ENST00000483868	RGL3	Q3MIN7	710 aa		40.16	■■■■■ 4.02
TPRA1-208	ENST00000483868	MYO5B	Q9ULV0	1848 aa		40.15	■■■■■ 4.02
TPRA1-208	ENST00000483868	A2ML1	A8K2U0	1454 aa		40.15	■■■■■ 4.02
TPRA1-208	ENST00000483868	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	40.15	■■■■■ 4.02
TPRA1-208	ENST00000483868	UHRF1BP1	Q6BDS2	1440 aa		40.14	■■■■■ 4.02
TPRA1-208	ENST00000483868	STAG3	Q9UJ98	1225 aa		40.14	■■■■■ 4.02
TPRA1-208	ENST00000483868	ADGRB3	O60242	1522 aa		40.13	■■■■■ 4.01
TPRA1-208	ENST00000483868	UBR1	Q8IWV7	1749 aa		40.12	■■■■■ 4.01
TPRA1-208	ENST00000483868	ZNF142	P52746	1687 aa	Predicted RBP	40.09	■■■■■ 4.01
TPRA1-208	ENST00000483868	ZNF326	Q5BKZ1	582 aa	Known RBP	40.05	■■■■■ 4
TPRA1-208	ENST00000483868	KDM5A	P29375	1690 aa	Known RBP	40.02	■■■■■ 4
TPRA1-208	ENST00000483868	NEURL4	Q96JN8	1562 aa		40.01	■■■■■ 4
TPRA1-208	ENST00000483868	L3MBTL2	Q969R5	705 aa		40.01	■■■■■ 4
TPRA1-208	ENST00000483868	LMTK3	Q96Q04	1460 aa		40.01	■■■■■ 4
TPRA1-208	ENST00000483868	THEMIS	Q8N1K5	641 aa	Predicted RBP	39.99	■■■■□ 3.99
TPRA1-208	ENST00000483868	NUTM2D	Q5VT03	806 aa	Predicted RBP	39.98	■■■■□ 3.99
TPRA1-208	ENST00000483868	TONSL	Q96HA7	1378 aa		39.97	■■■■□ 3.99
TPRA1-208	ENST00000483868	TMEM2	Q9UHN6	1383 aa		39.96	■■■■□ 3.99
TPRA1-208	ENST00000483868	HSPA2	P54652	639 aa		39.95	■■■■□ 3.99
TPRA1-208	ENST00000483868	DCAF11	Q8TEB1	546 aa		39.94	■■■■□ 3.98
TPRA1-208	ENST00000483868	NEXMIF	Q5QGS0	1516 aa		39.93	■■■■□ 3.98
TPRA1-208	ENST00000483868	ZFYVE9	O95405	1425 aa		39.92	■■■■□ 3.98

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms