RNA–Protein interactions for RNA: ENST00000483814.1

PKD1-217, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 563 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-217ENST00000483814 ZMYM3Q14202 1370 aa29.29■■■□□ 2.28
PKD1-217ENST00000483814 PPP6R1Q9UPN7 881 aa29.29■■■□□ 2.28
PKD1-217ENST00000483814 RNF17Q9BXT8 1623 aaKnown RBP29.27■■■□□ 2.28
PKD1-217ENST00000483814 ANKRD30AQ9BXX3 1397 aa29.27■■■□□ 2.28
PKD1-217ENST00000483814 KDM5DQ9BY66 1539 aa29.25■■■□□ 2.27
PKD1-217ENST00000483814 WASHC2CQ9Y4E1 1318 aa29.22■■■□□ 2.27
PKD1-217ENST00000483814 NCOA1Q15788 1441 aa29.22■■■□□ 2.27
PKD1-217ENST00000483814 ERBINQ96RT1 1412 aa29.22■■■□□ 2.27
PKD1-217ENST00000483814 HSPA2P54652 639 aa29.22■■■□□ 2.27
PKD1-217ENST00000483814 ADGRL2O95490 1459 aa29.22■■■□□ 2.27
PKD1-217ENST00000483814 UHRF1BP1Q6BDS2 1440 aa29.21■■■□□ 2.27
PKD1-217ENST00000483814 FAM135AQ9P2D6 1515 aa29.21■■■□□ 2.27
PKD1-217ENST00000483814 MROH1Q8NDA8 1641 aa29.2■■■□□ 2.26
PKD1-217ENST00000483814 ITGAEP38570 1179 aa29.18■■■□□ 2.26
PKD1-217ENST00000483814 NPATQ14207 1427 aa29.18■■■□□ 2.26
PKD1-217ENST00000483814 PTPRKQ15262 1439 aa29.18■■■□□ 2.26
PKD1-217ENST00000483814 ZC3H13Q5T200 1668 aaKnown RBP29.17■■■□□ 2.26
PKD1-217ENST00000483814 CEP152O94986 1710 aa29.17■■■□□ 2.26
PKD1-217ENST00000483814 ABCC3O15438 1527 aa29.15■■■□□ 2.26
PKD1-217ENST00000483814 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.13■■■□□ 2.25
PKD1-217ENST00000483814 DEPDC5O75140 1603 aa29.12■■■□□ 2.25
PKD1-217ENST00000483814 RRBP1Q9P2E9 1410 aaKnown RBP29.11■■■□□ 2.25
PKD1-217ENST00000483814 PRDM15P57071 1507 aaPredicted RBP29.11■■■□□ 2.25
PKD1-217ENST00000483814 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.11■■■□□ 2.25
PKD1-217ENST00000483814 MYO3AQ8NEV4 1616 aa29.1■■■□□ 2.25
PKD1-217ENST00000483814 PZPP20742 1482 aa29.1■■■□□ 2.25
PKD1-217ENST00000483814 CAMSAP1Q5T5Y3 1602 aa29.09■■■□□ 2.25
PKD1-217ENST00000483814 CFAP65Q6ZU64 1925 aaKnown RBP29.08■■■□□ 2.25
PKD1-217ENST00000483814 FBXO31Q5XUX0 539 aaPredicted RBP29.07■■■□□ 2.24
PKD1-217ENST00000483814 ANKRD50Q9ULJ7 1429 aa29.07■■■□□ 2.24
PKD1-217ENST00000483814 ROCK1Q13464 1354 aa29.05■■■□□ 2.24
PKD1-217ENST00000483814 KANK1Q14678 1352 aa29.04■■■□□ 2.24
PKD1-217ENST00000483814 ZNF142P52746 1687 aaPredicted RBP29.03■■■□□ 2.24
PKD1-217ENST00000483814 TNRQ92752 1358 aa29.02■■■□□ 2.24
PKD1-217ENST00000483814 CEP170BQ9Y4F5 1589 aaPredicted RBP29.01■■■□□ 2.24
PKD1-217ENST00000483814 STRCQ7RTU9 1775 aa28.99■■■□□ 2.23
PKD1-217ENST00000483814 VWDEQ8N2E2 1590 aa28.96■■■□□ 2.23
PKD1-217ENST00000483814 SPATA31D1Q6ZQQ2 1576 aa28.95■■■□□ 2.22
PKD1-217ENST00000483814 ERVK-7P63135 1459 aa28.94■■■□□ 2.22
PKD1-217ENST00000483814 A2ML1A8K2U0 1454 aa28.93■■■□□ 2.22
PKD1-217ENST00000483814 UNC13BO14795 1591 aa28.92■■■□□ 2.22
PKD1-217ENST00000483814 LMTK2Q8IWU2 1503 aa28.92■■■□□ 2.22
PKD1-217ENST00000483814 ARHGAP31Q2M1Z3 1444 aa28.91■■■□□ 2.22
PKD1-217ENST00000483814 NLRP1Q9C000 1473 aa28.88■■■□□ 2.21
PKD1-217ENST00000483814 EFCAB6Q5THR3 1501 aa28.88■■■□□ 2.21
PKD1-217ENST00000483814 GCC2Q8IWJ2 1684 aa28.85■■■□□ 2.21
PKD1-217ENST00000483814 TET3O43151 1660 aa28.84■■■□□ 2.21
PKD1-217ENST00000483814 DMRT2Q9Y5R5 561 aa28.83■■■□□ 2.21
PKD1-217ENST00000483814 UGGT1Q9NYU2 1555 aa28.83■■■□□ 2.21
PKD1-217ENST00000483814 PLA2R1Q13018 1463 aa28.82■■■□□ 2.2
PKD1-217ENST00000483814 IQGAP3Q86VI3 1631 aa28.81■■■□□ 2.2
PKD1-217ENST00000483814 NCKAP5LQ9HCH0 1330 aa28.81■■■□□ 2.2
PKD1-217ENST00000483814 NAIPQ13075 1403 aa28.8■■■□□ 2.2
PKD1-217ENST00000483814 NUP155O75694 1391 aa28.79■■■□□ 2.2
PKD1-217ENST00000483814 POLR1AO95602 1720 aaPredicted RBP28.77■■■□□ 2.2
PKD1-217ENST00000483814 PTPRTO14522 1441 aa28.77■■■□□ 2.2
PKD1-217ENST00000483814 THEMISQ8N1K5 641 aaPredicted RBP28.76■■■□□ 2.19
PKD1-217ENST00000483814 UBR1Q8IWV7 1749 aa28.76■■■□□ 2.19
PKD1-217ENST00000483814 SYNMO15061 1565 aa28.75■■■□□ 2.19
PKD1-217ENST00000483814 PKD2Q13563 968 aa28.75■■■□□ 2.19
PKD1-217ENST00000483814 E9PCH4 1651 aa28.74■■■□□ 2.19
PKD1-217ENST00000483814 RPRD2Q5VT52 1461 aaKnown RBP28.74■■■□□ 2.19
PKD1-217ENST00000483814 PIK3C2BO00750 1634 aa28.74■■■□□ 2.19
PKD1-217ENST00000483814 HFM1A2PYH4 1435 aa28.74■■■□□ 2.19
PKD1-217ENST00000483814 NOS1P29475 1434 aa28.72■■■□□ 2.19
PKD1-217ENST00000483814 ANKLE2Q86XL3 938 aa28.67■■■□□ 2.18
PKD1-217ENST00000483814 STAG3Q9UJ98 1225 aa28.67■■■□□ 2.18
PKD1-217ENST00000483814 NEURL4Q96JN8 1562 aa28.67■■■□□ 2.18
PKD1-217ENST00000483814 IDI1Q13907 227 aa28.66■■■□□ 2.18
PKD1-217ENST00000483814 TRIM52Q96A61 297 aa28.63■■■□□ 2.17
PKD1-217ENST00000483814 KDM5AP29375 1690 aaKnown RBP28.62■■■□□ 2.17
PKD1-217ENST00000483814 SLC52A1Q9NWF4 448 aa28.61■■■□□ 2.17
PKD1-217ENST00000483814 MYO5BQ9ULV0 1848 aa28.59■■■□□ 2.17
PKD1-217ENST00000483814 ADGRB3O60242 1522 aa28.59■■■□□ 2.17
PKD1-217ENST00000483814 SLIT1O75093 1534 aa28.58■■■□□ 2.17
PKD1-217ENST00000483814 SPHKAPQ2M3C7 1700 aa28.57■■■□□ 2.16
PKD1-217ENST00000483814 NPHP4O75161 1426 aaPredicted RBP28.57■■■□□ 2.16
PKD1-217ENST00000483814 IQGAP1P46940 1657 aa28.57■■■□□ 2.16
PKD1-217ENST00000483814 ARHGAP23Q9P227 1491 aa28.56■■■□□ 2.16
PKD1-217ENST00000483814 MED14O60244 1454 aa28.55■■■□□ 2.16
PKD1-217ENST00000483814 CERKQ8TCT0 537 aa28.55■■■□□ 2.16
PKD1-217ENST00000483814 SCAF11Q99590 1463 aaKnown RBP28.54■■■□□ 2.16
PKD1-217ENST00000483814 TMEM2Q9UHN6 1383 aa28.53■■■□□ 2.16
PKD1-217ENST00000483814 ZNF335Q9H4Z2 1342 aaPredicted RBP28.53■■■□□ 2.16
PKD1-217ENST00000483814 TXNDC2Q86VQ3 553 aa28.53■■■□□ 2.16
PKD1-217ENST00000483814 LTBP4Q8N2S1 1624 aa28.52■■■□□ 2.16
PKD1-217ENST00000483814 LTKP29376 864 aa28.52■■■□□ 2.16
PKD1-217ENST00000483814 EID1Q9Y6B2 187 aa28.52■■■□□ 2.16
PKD1-217ENST00000483814 TMEM131LA2VDJ0 1609 aa28.51■■■□□ 2.15
PKD1-217ENST00000483814 CHGAP10645 457 aaKnown RBP28.51■■■□□ 2.15
PKD1-217ENST00000483814 ILDR1Q86SU0 546 aaPredicted RBP28.49■■■□□ 2.15
PKD1-217ENST00000483814 SLC4A1APQ9BWU0 796 aaKnown RBP28.49■■■□□ 2.15
PKD1-217ENST00000483814 SETD5Q9C0A6 1442 aa28.47■■■□□ 2.15
PKD1-217ENST00000483814 FBXO41Q8TF61 875 aa28.43■■■□□ 2.14
PKD1-217ENST00000483814 TRPM2O94759 1503 aa28.42■■■□□ 2.14
PKD1-217ENST00000483814 CLTCL1P53675 1640 aa28.41■■■□□ 2.14
PKD1-217ENST00000483814 RIMS2Q9UQ26 1411 aa28.4■■■□□ 2.14
PKD1-217ENST00000483814 RAB3GAP2Q9H2M9 1393 aa28.38■■■□□ 2.13
PKD1-217ENST00000483814 ZFYVE9O95405 1425 aa28.38■■■□□ 2.13
PKD1-217ENST00000483814 KIF1BO60333 1816 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms