RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 KDM5DQ9BY66 1539 aa31.16■■■□□ 2.58
HPS4-213ENST00000483631 CEP170BQ9Y4F5 1589 aaPredicted RBP31.12■■■□□ 2.57
HPS4-213ENST00000483631 EIF2AK4Q9P2K8 1649 aaKnown RBP31.12■■■□□ 2.57
HPS4-213ENST00000483631 CAMSAP1Q5T5Y3 1602 aa31.11■■■□□ 2.57
HPS4-213ENST00000483631 CERKQ8TCT0 537 aa31.11■■■□□ 2.57
HPS4-213ENST00000483631 RNF17Q9BXT8 1623 aaKnown RBP31.11■■■□□ 2.57
HPS4-213ENST00000483631 PZPP20742 1482 aa31.09■■■□□ 2.57
HPS4-213ENST00000483631 PLA2R1Q13018 1463 aa31.09■■■□□ 2.57
HPS4-213ENST00000483631 SHANK2Q9UPX8 1470 aa31.08■■■□□ 2.57
HPS4-213ENST00000483631 PTPN23Q9H3S7 1636 aa31.08■■■□□ 2.57
HPS4-213ENST00000483631 WASHC2CQ9Y4E1 1318 aa31.07■■■□□ 2.56
HPS4-213ENST00000483631 CROCC2H7BZ55 1655 aa31.05■■■□□ 2.56
HPS4-213ENST00000483631 DUOX2Q9NRD8 1548 aa31.04■■■□□ 2.56
HPS4-213ENST00000483631 ZC3H13Q5T200 1668 aaKnown RBP31.04■■■□□ 2.56
HPS4-213ENST00000483631 A2ML1A8K2U0 1454 aa31.04■■■□□ 2.56
HPS4-213ENST00000483631 TCOF1Q13428 1488 aaKnown RBP31.03■■■□□ 2.56
HPS4-213ENST00000483631 FGD6Q6ZV73 1430 aa31.02■■■□□ 2.56
HPS4-213ENST00000483631 PKD2Q13563 968 aa31.01■■■□□ 2.55
HPS4-213ENST00000483631 ABCC5O15440 1437 aa31■■■□□ 2.55
HPS4-213ENST00000483631 TNRQ92752 1358 aa31■■■□□ 2.55
HPS4-213ENST00000483631 DNMT1P26358 1616 aaKnown RBP30.99■■■□□ 2.55
HPS4-213ENST00000483631 ABCC3O15438 1527 aa30.97■■■□□ 2.55
HPS4-213ENST00000483631 DAPK1P53355 1430 aa30.96■■■□□ 2.55
HPS4-213ENST00000483631 MROH1Q8NDA8 1641 aa30.95■■■□□ 2.55
HPS4-213ENST00000483631 ERBINQ96RT1 1412 aa30.95■■■□□ 2.54
HPS4-213ENST00000483631 KIF15Q9NS87 1388 aa30.94■■■□□ 2.54
HPS4-213ENST00000483631 FBXO31Q5XUX0 539 aaPredicted RBP30.94■■■□□ 2.54
HPS4-213ENST00000483631 NLRP1Q9C000 1473 aa30.94■■■□□ 2.54
HPS4-213ENST00000483631 LTBP4Q8N2S1 1624 aa30.93■■■□□ 2.54
HPS4-213ENST00000483631 NCKAP5LQ9HCH0 1330 aa30.91■■■□□ 2.54
HPS4-213ENST00000483631 IQSEC2Q5JU85 1478 aa30.9■■■□□ 2.54
HPS4-213ENST00000483631 PRDM15P57071 1507 aaPredicted RBP30.88■■■□□ 2.53
HPS4-213ENST00000483631 SPATA31D1Q6ZQQ2 1576 aa30.88■■■□□ 2.53
HPS4-213ENST00000483631 CEP152O94986 1710 aa30.85■■■□□ 2.53
HPS4-213ENST00000483631 POLR1AO95602 1720 aaPredicted RBP30.85■■■□□ 2.53
HPS4-213ENST00000483631 DEPDC5O75140 1603 aa30.84■■■□□ 2.53
HPS4-213ENST00000483631 ANKRD30AQ9BXX3 1397 aa30.84■■■□□ 2.53
HPS4-213ENST00000483631 RRP7BPQ9NSQ0 103 aa30.83■■■□□ 2.53
HPS4-213ENST00000483631 THEMISQ8N1K5 641 aaPredicted RBP30.82■■■□□ 2.52
HPS4-213ENST00000483631 UGGT1Q9NYU2 1555 aa30.82■■■□□ 2.52
HPS4-213ENST00000483631 ERVK-7P63135 1459 aa30.82■■■□□ 2.52
HPS4-213ENST00000483631 ARHGAP31Q2M1Z3 1444 aa30.81■■■□□ 2.52
HPS4-213ENST00000483631 ADGRL2O95490 1459 aa30.8■■■□□ 2.52
HPS4-213ENST00000483631 NEURL4Q96JN8 1562 aa30.77■■■□□ 2.52
HPS4-213ENST00000483631 CFAP65Q6ZU64 1925 aaKnown RBP30.75■■■□□ 2.51
HPS4-213ENST00000483631 ANKLE2Q86XL3 938 aa30.74■■■□□ 2.51
HPS4-213ENST00000483631 KANK1Q14678 1352 aa30.74■■■□□ 2.51
HPS4-213ENST00000483631 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.73■■■□□ 2.51
HPS4-213ENST00000483631 ZNF335Q9H4Z2 1342 aaPredicted RBP30.73■■■□□ 2.51
HPS4-213ENST00000483631 MED14O60244 1454 aa30.72■■■□□ 2.51
HPS4-213ENST00000483631 LMTK2Q8IWU2 1503 aa30.72■■■□□ 2.51
HPS4-213ENST00000483631 VWDEQ8N2E2 1590 aa30.71■■■□□ 2.51
HPS4-213ENST00000483631 CHIC2Q9UKJ5 165 aa30.71■■■□□ 2.51
HPS4-213ENST00000483631 FAM50AQ14320 339 aaKnown RBP30.69■■■□□ 2.5
HPS4-213ENST00000483631 UBR1Q8IWV7 1749 aa30.67■■■□□ 2.5
HPS4-213ENST00000483631 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.64■■■□□ 2.5
HPS4-213ENST00000483631 NPHP4O75161 1426 aaPredicted RBP30.64■■■□□ 2.49
HPS4-213ENST00000483631 CPS1P31327 1500 aa30.63■■■□□ 2.49
HPS4-213ENST00000483631 ANKRD50Q9ULJ7 1429 aa30.62■■■□□ 2.49
HPS4-213ENST00000483631 IQGAP1P46940 1657 aa30.61■■■□□ 2.49
HPS4-213ENST00000483631 KDM5AP29375 1690 aaKnown RBP30.59■■■□□ 2.49
HPS4-213ENST00000483631 EFCAB6Q5THR3 1501 aa30.58■■■□□ 2.49
HPS4-213ENST00000483631 SLIT1O75093 1534 aa30.57■■■□□ 2.49
HPS4-213ENST00000483631 ARHGAP23Q9P227 1491 aa30.57■■■□□ 2.48
HPS4-213ENST00000483631 ROCK1Q13464 1354 aa30.55■■■□□ 2.48
HPS4-213ENST00000483631 RPRD2Q5VT52 1461 aaKnown RBP30.53■■■□□ 2.48
HPS4-213ENST00000483631 SCAF11Q99590 1463 aaKnown RBP30.53■■■□□ 2.48
HPS4-213ENST00000483631 PIK3C2BO00750 1634 aa30.53■■■□□ 2.48
HPS4-213ENST00000483631 NOS1P29475 1434 aa30.52■■■□□ 2.48
HPS4-213ENST00000483631 UNC13BO14795 1591 aa30.49■■■□□ 2.47
HPS4-213ENST00000483631 SYNMO15061 1565 aa30.49■■■□□ 2.47
HPS4-213ENST00000483631 TET3O43151 1660 aa30.48■■■□□ 2.47
HPS4-213ENST00000483631 UBAP1LF5GYI3 381 aa30.47■■■□□ 2.47
HPS4-213ENST00000483631 TMEM2Q9UHN6 1383 aa30.45■■■□□ 2.47
HPS4-213ENST00000483631 SLC52A1Q9NWF4 448 aa30.45■■■□□ 2.47
HPS4-213ENST00000483631 EID1Q9Y6B2 187 aa30.45■■■□□ 2.47
HPS4-213ENST00000483631 GCC2Q8IWJ2 1684 aa30.45■■■□□ 2.46
HPS4-213ENST00000483631 IDI1Q13907 227 aa30.44■■■□□ 2.46
HPS4-213ENST00000483631 LTKP29376 864 aa30.43■■■□□ 2.46
HPS4-213ENST00000483631 TXNDC2Q86VQ3 553 aa30.43■■■□□ 2.46
HPS4-213ENST00000483631 STAG3Q9UJ98 1225 aa30.42■■■□□ 2.46
HPS4-213ENST00000483631 ADGRB3O60242 1522 aa30.4■■■□□ 2.46
HPS4-213ENST00000483631 STRCP1A6NGW2 1772 aa30.38■■■□□ 2.45
HPS4-213ENST00000483631 TOM1O60784 492 aa30.37■■■□□ 2.45
HPS4-213ENST00000483631 IQGAP3Q86VI3 1631 aa30.36■■■□□ 2.45
HPS4-213ENST00000483631 LRRC7Q96NW7 1537 aa30.33■■■□□ 2.45
HPS4-213ENST00000483631 RRBP1Q9P2E9 1410 aaKnown RBP30.32■■■□□ 2.44
HPS4-213ENST00000483631 E9PCH4 1651 aa30.3■■■□□ 2.44
HPS4-213ENST00000483631 ILDR2Q71H61 639 aa30.29■■■□□ 2.44
HPS4-213ENST00000483631 PPARGC1BQ86YN6 1023 aaKnown RBP30.29■■■□□ 2.44
HPS4-213ENST00000483631 DISP3Q9P2K9 1392 aa30.28■■■□□ 2.44
HPS4-213ENST00000483631 ITGAEP38570 1179 aa30.26■■■□□ 2.43
HPS4-213ENST00000483631 NUP155O75694 1391 aa30.25■■■□□ 2.43
HPS4-213ENST00000483631 TMEM131LA2VDJ0 1609 aa30.25■■■□□ 2.43
HPS4-213ENST00000483631 MYO5BQ9ULV0 1848 aa30.24■■■□□ 2.43
HPS4-213ENST00000483631 ALKQ9UM73 1620 aa30.23■■■□□ 2.43
HPS4-213ENST00000483631 ZFYVE9O95405 1425 aa30.22■■■□□ 2.43
HPS4-213ENST00000483631 HDGFP51858 240 aaKnown RBP30.22■■■□□ 2.43
HPS4-213ENST00000483631 SOCS7O14512 581 aa30.21■■■□□ 2.43
HPS4-213ENST00000483631 XIRP1Q702N8 1843 aaKnown RBP30.18■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms