RNA–Protein interactions for RNA: ENST00000483617.5

PTPN18-212, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-212ENST00000483617 PCGF6Q9BYE7 350 aa17.28■□□□□ 0.36
PTPN18-212ENST00000483617 DMRT2Q9Y5R5 561 aa17.28■□□□□ 0.36
PTPN18-212ENST00000483617 NCOA1Q15788 1441 aa17.28■□□□□ 0.36
PTPN18-212ENST00000483617 CEP170BQ9Y4F5 1589 aaPredicted RBP17.26■□□□□ 0.35
PTPN18-212ENST00000483617 CAMSAP1Q5T5Y3 1602 aa17.25■□□□□ 0.35
PTPN18-212ENST00000483617 PTPN23Q9H3S7 1636 aa17.25■□□□□ 0.35
PTPN18-212ENST00000483617 PTPRTO14522 1441 aa17.25■□□□□ 0.35
PTPN18-212ENST00000483617 RNF17Q9BXT8 1623 aaKnown RBP17.25■□□□□ 0.35
PTPN18-212ENST00000483617 EIF2AK4Q9P2K8 1649 aaKnown RBP17.25■□□□□ 0.35
PTPN18-212ENST00000483617 CROCC2H7BZ55 1655 aa17.24■□□□□ 0.35
PTPN18-212ENST00000483617 PZPP20742 1482 aa17.24■□□□□ 0.35
PTPN18-212ENST00000483617 SHANK2Q9UPX8 1470 aa17.24■□□□□ 0.35
PTPN18-212ENST00000483617 WASHC2CQ9Y4E1 1318 aa17.21■□□□□ 0.35
PTPN18-212ENST00000483617 FGD6Q6ZV73 1430 aa17.21■□□□□ 0.35
PTPN18-212ENST00000483617 PLA2R1Q13018 1463 aa17.21■□□□□ 0.35
PTPN18-212ENST00000483617 TCOF1Q13428 1488 aaKnown RBP17.21■□□□□ 0.35
PTPN18-212ENST00000483617 CERKQ8TCT0 537 aa17.21■□□□□ 0.35
PTPN18-212ENST00000483617 ZC3H13Q5T200 1668 aaKnown RBP17.2■□□□□ 0.34
PTPN18-212ENST00000483617 DUOX2Q9NRD8 1548 aa17.2■□□□□ 0.34
PTPN18-212ENST00000483617 ABCC5O15440 1437 aa17.2■□□□□ 0.34
PTPN18-212ENST00000483617 A2ML1A8K2U0 1454 aa17.19■□□□□ 0.34
PTPN18-212ENST00000483617 DNMT1P26358 1616 aaKnown RBP17.19■□□□□ 0.34
PTPN18-212ENST00000483617 ABCC3O15438 1527 aa17.19■□□□□ 0.34
PTPN18-212ENST00000483617 MROH1Q8NDA8 1641 aa17.18■□□□□ 0.34
PTPN18-212ENST00000483617 TNRQ92752 1358 aa17.18■□□□□ 0.34
PTPN18-212ENST00000483617 DAPK1P53355 1430 aa17.18■□□□□ 0.34
PTPN18-212ENST00000483617 KIF15Q9NS87 1388 aa17.17■□□□□ 0.34
PTPN18-212ENST00000483617 FBXO31Q5XUX0 539 aaPredicted RBP17.16■□□□□ 0.34
PTPN18-212ENST00000483617 ERBINQ96RT1 1412 aa17.15■□□□□ 0.34
PTPN18-212ENST00000483617 PKD2Q13563 968 aa17.14■□□□□ 0.33
PTPN18-212ENST00000483617 PRDM15P57071 1507 aaPredicted RBP17.14■□□□□ 0.33
PTPN18-212ENST00000483617 NCKAP5LQ9HCH0 1330 aa17.14■□□□□ 0.33
PTPN18-212ENST00000483617 LTBP4Q8N2S1 1624 aa17.14■□□□□ 0.33
PTPN18-212ENST00000483617 RRBP1Q9P2E9 1410 aaKnown RBP17.13■□□□□ 0.33
PTPN18-212ENST00000483617 CEP152O94986 1710 aa17.13■□□□□ 0.33
PTPN18-212ENST00000483617 NLRP1Q9C000 1473 aa17.12■□□□□ 0.33
PTPN18-212ENST00000483617 SPATA31D1Q6ZQQ2 1576 aa17.12■□□□□ 0.33
PTPN18-212ENST00000483617 RRP7BPQ9NSQ0 103 aa17.11■□□□□ 0.33
PTPN18-212ENST00000483617 DEPDC5O75140 1603 aa17.1■□□□□ 0.33
PTPN18-212ENST00000483617 FAM50AQ14320 339 aaKnown RBP17.1■□□□□ 0.33
PTPN18-212ENST00000483617 ERVK-7P63135 1459 aa17.1■□□□□ 0.33
PTPN18-212ENST00000483617 POLR1AO95602 1720 aaPredicted RBP17.1■□□□□ 0.33
PTPN18-212ENST00000483617 ANKRD30AQ9BXX3 1397 aa17.09■□□□□ 0.33
PTPN18-212ENST00000483617 UGGT1Q9NYU2 1555 aa17.09■□□□□ 0.33
PTPN18-212ENST00000483617 NEURL4Q96JN8 1562 aa17.07■□□□□ 0.32
PTPN18-212ENST00000483617 ADGRL2O95490 1459 aa17.07■□□□□ 0.32
PTPN18-212ENST00000483617 IQSEC2Q5JU85 1478 aa17.07■□□□□ 0.32
PTPN18-212ENST00000483617 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.06■□□□□ 0.32
PTPN18-212ENST00000483617 CHIC2Q9UKJ5 165 aa17.06■□□□□ 0.32
PTPN18-212ENST00000483617 ARHGAP31Q2M1Z3 1444 aa17.05■□□□□ 0.32
PTPN18-212ENST00000483617 ZNF335Q9H4Z2 1342 aaPredicted RBP17.05■□□□□ 0.32
PTPN18-212ENST00000483617 KANK1Q14678 1352 aa17.03■□□□□ 0.32
PTPN18-212ENST00000483617 THEMISQ8N1K5 641 aaPredicted RBP17.03■□□□□ 0.32
PTPN18-212ENST00000483617 VWDEQ8N2E2 1590 aa17.02■□□□□ 0.32
PTPN18-212ENST00000483617 LMTK2Q8IWU2 1503 aa17.02■□□□□ 0.32
PTPN18-212ENST00000483617 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.01■□□□□ 0.312e-8■■■□□ 14.6
PTPN18-212ENST00000483617 ITGAEP38570 1179 aa17■□□□□ 0.31
PTPN18-212ENST00000483617 ANKLE2Q86XL3 938 aa17■□□□□ 0.31
PTPN18-212ENST00000483617 UBR1Q8IWV7 1749 aa17■□□□□ 0.31
PTPN18-212ENST00000483617 MED14O60244 1454 aa16.99■□□□□ 0.31
PTPN18-212ENST00000483617 CFAP65Q6ZU64 1925 aaKnown RBP16.98■□□□□ 0.31
PTPN18-212ENST00000483617 NPHP4O75161 1426 aaPredicted RBP16.98■□□□□ 0.31
PTPN18-212ENST00000483617 IQGAP1P46940 1657 aa16.97■□□□□ 0.31
PTPN18-212ENST00000483617 ANKRD50Q9ULJ7 1429 aa16.97■□□□□ 0.31
PTPN18-212ENST00000483617 EFCAB6Q5THR3 1501 aa16.97■□□□□ 0.31
PTPN18-212ENST00000483617 CPS1P31327 1500 aa16.96■□□□□ 0.3
PTPN18-212ENST00000483617 PIK3C2BO00750 1634 aa16.94■□□□□ 0.3
PTPN18-212ENST00000483617 SLIT1O75093 1534 aa16.94■□□□□ 0.3
PTPN18-212ENST00000483617 SCAF11Q99590 1463 aaKnown RBP16.93■□□□□ 0.3
PTPN18-212ENST00000483617 ARHGAP23Q9P227 1491 aa16.93■□□□□ 0.3
PTPN18-212ENST00000483617 SYNMO15061 1565 aa16.93■□□□□ 0.3
PTPN18-212ENST00000483617 ROCK1Q13464 1354 aa16.92■□□□□ 0.3
PTPN18-212ENST00000483617 UNC13BO14795 1591 aa16.92■□□□□ 0.3
PTPN18-212ENST00000483617 KDM5AP29375 1690 aaKnown RBP16.91■□□□□ 0.3
PTPN18-212ENST00000483617 NOS1P29475 1434 aa16.91■□□□□ 0.3
PTPN18-212ENST00000483617 RPRD2Q5VT52 1461 aaKnown RBP16.9■□□□□ 0.3
PTPN18-212ENST00000483617 TET3O43151 1660 aa16.9■□□□□ 0.3
PTPN18-212ENST00000483617 UBAP1LF5GYI3 381 aa16.88■□□□□ 0.29
PTPN18-212ENST00000483617 ADGRB3O60242 1522 aa16.87■□□□□ 0.29
PTPN18-212ENST00000483617 GCC2Q8IWJ2 1684 aa16.87■□□□□ 0.29
PTPN18-212ENST00000483617 TMEM2Q9UHN6 1383 aa16.87■□□□□ 0.29
PTPN18-212ENST00000483617 LTKP29376 864 aa16.86■□□□□ 0.29
PTPN18-212ENST00000483617 IDI1Q13907 227 aa16.86■□□□□ 0.29
PTPN18-212ENST00000483617 STAG3Q9UJ98 1225 aa16.86■□□□□ 0.29
PTPN18-212ENST00000483617 TXNDC2Q86VQ3 553 aa16.85■□□□□ 0.29
PTPN18-212ENST00000483617 EID1Q9Y6B2 187 aa16.85■□□□□ 0.29
PTPN18-212ENST00000483617 STRCP1A6NGW2 1772 aa16.84■□□□□ 0.29
PTPN18-212ENST00000483617 IQGAP3Q86VI3 1631 aa16.84■□□□□ 0.29
PTPN18-212ENST00000483617 SLC52A1Q9NWF4 448 aa16.83■□□□□ 0.28
PTPN18-212ENST00000483617 SETD5Q9C0A6 1442 aa16.82■□□□□ 0.28
PTPN18-212ENST00000483617 LRRC7Q96NW7 1537 aa16.81■□□□□ 0.28
PTPN18-212ENST00000483617 ACIN1Q9UKV3 1341 aaKnown RBP16.81■□□□□ 0.28
PTPN18-212ENST00000483617 E9PCH4 1651 aa16.81■□□□□ 0.28
PTPN18-212ENST00000483617 TOM1O60784 492 aa16.79■□□□□ 0.28
PTPN18-212ENST00000483617 CCER1Q8TC90 406 aaPredicted RBP16.79■□□□□ 0.28
PTPN18-212ENST00000483617 HRCP23327 699 aa16.78■□□□□ 0.28
PTPN18-212ENST00000483617 HFM1A2PYH4 1435 aa16.78■□□□□ 0.28
PTPN18-212ENST00000483617 ALKQ9UM73 1620 aa16.78■□□□□ 0.28
PTPN18-212ENST00000483617 NUP155O75694 1391 aa16.77■□□□□ 0.28
PTPN18-212ENST00000483617 TMEM131LA2VDJ0 1609 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms