RNA–Protein interactions for RNA: ENST00000483538.1

POLR1A-207, Transcript of RNA polymerase I subunit A, humanhuman

TSL 4

Gene POLR1A, Length 593 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-207ENST00000483538 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.8□□□□□ -0.2
POLR1A-207ENST00000483538 ERBINQ96RT1 1412 aa13.8□□□□□ -0.2
POLR1A-207ENST00000483538 CAMSAP1Q5T5Y3 1602 aa13.79□□□□□ -0.2
POLR1A-207ENST00000483538 TSPY4P0CV99 314 aa13.79□□□□□ -0.2
POLR1A-207ENST00000483538 TSPY10P0CW01 314 aa13.79□□□□□ -0.2
POLR1A-207ENST00000483538 CNTLNQ9NXG0 1405 aa13.79□□□□□ -0.2
POLR1A-207ENST00000483538 ABCC3O15438 1527 aa13.79□□□□□ -0.2
POLR1A-207ENST00000483538 FAM50AQ14320 339 aaKnown RBP13.78□□□□□ -0.2
POLR1A-207ENST00000483538 VWDEQ8N2E2 1590 aa13.78□□□□□ -0.2
POLR1A-207ENST00000483538 MYO3AQ8NEV4 1616 aa13.78□□□□□ -0.2
POLR1A-207ENST00000483538 UNC13BO14795 1591 aa13.77□□□□□ -0.21
POLR1A-207ENST00000483538 ZNF142P52746 1687 aaPredicted RBP13.77□□□□□ -0.21
POLR1A-207ENST00000483538 GCC2Q8IWJ2 1684 aa13.77□□□□□ -0.21
POLR1A-207ENST00000483538 ANKRD30AQ9BXX3 1397 aa13.75□□□□□ -0.21
POLR1A-207ENST00000483538 CEBPAP49715 358 aaPredicted RBP13.75□□□□□ -0.21
POLR1A-207ENST00000483538 KIF3BO15066 747 aa13.74□□□□□ -0.21
POLR1A-207ENST00000483538 CHIC2Q9UKJ5 165 aa13.74□□□□□ -0.21
POLR1A-207ENST00000483538 ROCK1Q13464 1354 aa13.73□□□□□ -0.21
POLR1A-207ENST00000483538 GGT6Q6P531 493 aa13.73□□□□□ -0.21
POLR1A-207ENST00000483538 RRP7BPQ9NSQ0 103 aa13.73□□□□□ -0.21
POLR1A-207ENST00000483538 ZMYM3Q14202 1370 aa13.72□□□□□ -0.21
POLR1A-207ENST00000483538 PZPP20742 1482 aa13.72□□□□□ -0.21
POLR1A-207ENST00000483538 NPATQ14207 1427 aa13.72□□□□□ -0.21
POLR1A-207ENST00000483538 SETD1BQ9UPS6 1966 aaKnown RBP13.71□□□□□ -0.22
POLR1A-207ENST00000483538 LMTK2Q8IWU2 1503 aa13.7□□□□□ -0.22
POLR1A-207ENST00000483538 PLPPR3Q6T4P5 718 aa13.7□□□□□ -0.22
POLR1A-207ENST00000483538 ANKRD50Q9ULJ7 1429 aa13.7□□□□□ -0.22
POLR1A-207ENST00000483538 STRCQ7RTU9 1775 aa13.7□□□□□ -0.22
POLR1A-207ENST00000483538 SPATA31D1Q6ZQQ2 1576 aa13.7□□□□□ -0.22
POLR1A-207ENST00000483538 EFCAB6Q5THR3 1501 aa13.69□□□□□ -0.22
POLR1A-207ENST00000483538 IQGAP3Q86VI3 1631 aa13.69□□□□□ -0.22
POLR1A-207ENST00000483538 CEP170BQ9Y4F5 1589 aaPredicted RBP13.69□□□□□ -0.22
POLR1A-207ENST00000483538 PPP6R1Q9UPN7 881 aa13.68□□□□□ -0.22
POLR1A-207ENST00000483538 TET3O43151 1660 aa13.68□□□□□ -0.22
POLR1A-207ENST00000483538 UHRF1BP1Q6BDS2 1440 aa13.66□□□□□ -0.22
POLR1A-207ENST00000483538 ERVK-7P63135 1459 aa13.66□□□□□ -0.22
POLR1A-207ENST00000483538 CFAP65Q6ZU64 1925 aaKnown RBP13.66□□□□□ -0.22
POLR1A-207ENST00000483538 E9PCH4 1651 aa13.66□□□□□ -0.22
POLR1A-207ENST00000483538 NAIPQ13075 1403 aa13.65□□□□□ -0.22
POLR1A-207ENST00000483538 ITGAEP38570 1179 aa13.65□□□□□ -0.22
POLR1A-207ENST00000483538 SYNMO15061 1565 aa13.65□□□□□ -0.22
POLR1A-207ENST00000483538 ESF1Q9H501 851 aaKnown RBP13.64□□□□□ -0.23
POLR1A-207ENST00000483538 ARHGAP31Q2M1Z3 1444 aa13.64□□□□□ -0.23
POLR1A-207ENST00000483538 WASHC2CQ9Y4E1 1318 aa13.64□□□□□ -0.23
POLR1A-207ENST00000483538 UBR1Q8IWV7 1749 aa13.63□□□□□ -0.23
POLR1A-207ENST00000483538 HFM1A2PYH4 1435 aa13.63□□□□□ -0.23
POLR1A-207ENST00000483538 HSPA2P54652 639 aa13.62□□□□□ -0.23
POLR1A-207ENST00000483538 FBXO31Q5XUX0 539 aaPredicted RBP13.62□□□□□ -0.23
POLR1A-207ENST00000483538 POLR1AO95602 1720 aaPredicted RBP13.61□□□□□ -0.23
POLR1A-207ENST00000483538 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
POLR1A-207ENST00000483538 PIK3C2BO00750 1634 aa13.61□□□□□ -0.23
POLR1A-207ENST00000483538 TNRQ92752 1358 aa13.6□□□□□ -0.23
POLR1A-207ENST00000483538 NEURL4Q96JN8 1562 aa13.58□□□□□ -0.23
POLR1A-207ENST00000483538 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.58□□□□□ -0.248e-9■□□□□ 9.1
POLR1A-207ENST00000483538 NLRP1Q9C000 1473 aa13.58□□□□□ -0.24
POLR1A-207ENST00000483538 KDM5AP29375 1690 aaKnown RBP13.58□□□□□ -0.24
POLR1A-207ENST00000483538 KANK1Q14678 1352 aa13.58□□□□□ -0.24
POLR1A-207ENST00000483538 MYO5BQ9ULV0 1848 aa13.57□□□□□ -0.24
POLR1A-207ENST00000483538 NOS1P29475 1434 aa13.57□□□□□ -0.24
POLR1A-207ENST00000483538 RPRD2Q5VT52 1461 aaKnown RBP13.57□□□□□ -0.24
POLR1A-207ENST00000483538 SPHKAPQ2M3C7 1700 aa13.57□□□□□ -0.24
POLR1A-207ENST00000483538 PLA2R1Q13018 1463 aa13.56□□□□□ -0.24
POLR1A-207ENST00000483538 UGGT1Q9NYU2 1555 aa13.56□□□□□ -0.24
POLR1A-207ENST00000483538 ADGRB3O60242 1522 aa13.54□□□□□ -0.24
POLR1A-207ENST00000483538 TMEM131LA2VDJ0 1609 aa13.52□□□□□ -0.25
POLR1A-207ENST00000483538 NUP155O75694 1391 aa13.51□□□□□ -0.25
POLR1A-207ENST00000483538 CLTCL1P53675 1640 aa13.5□□□□□ -0.25
POLR1A-207ENST00000483538 SLIT1O75093 1534 aa13.49□□□□□ -0.25
POLR1A-207ENST00000483538 ARHGAP23Q9P227 1491 aa13.49□□□□□ -0.25
POLR1A-207ENST00000483538 TRPM2O94759 1503 aa13.49□□□□□ -0.25
POLR1A-207ENST00000483538 IQGAP1P46940 1657 aa13.48□□□□□ -0.25
POLR1A-207ENST00000483538 PTPRTO14522 1441 aa13.47□□□□□ -0.25
POLR1A-207ENST00000483538 MED14O60244 1454 aa13.46□□□□□ -0.25
POLR1A-207ENST00000483538 LTBP4Q8N2S1 1624 aa13.45□□□□□ -0.26
POLR1A-207ENST00000483538 SETD5Q9C0A6 1442 aa13.45□□□□□ -0.26
POLR1A-207ENST00000483538 NCKAP5LQ9HCH0 1330 aa13.44□□□□□ -0.26
POLR1A-207ENST00000483538 STRCP1A6NGW2 1772 aa13.44□□□□□ -0.26
POLR1A-207ENST00000483538 IDI1Q13907 227 aa13.43□□□□□ -0.26
POLR1A-207ENST00000483538 RAB3GAP2Q9H2M9 1393 aa13.43□□□□□ -0.26
POLR1A-207ENST00000483538 SCAF11Q99590 1463 aaKnown RBP13.42□□□□□ -0.26
POLR1A-207ENST00000483538 ZFYVE9O95405 1425 aa13.42□□□□□ -0.26
POLR1A-207ENST00000483538 KIF1BO60333 1816 aa13.42□□□□□ -0.26
POLR1A-207ENST00000483538 TMEM2Q9UHN6 1383 aa13.41□□□□□ -0.26
POLR1A-207ENST00000483538 NPHP4O75161 1426 aaPredicted RBP13.39□□□□□ -0.27
POLR1A-207ENST00000483538 IFT172Q9UG01 1749 aa13.39□□□□□ -0.27
POLR1A-207ENST00000483538 PKD2Q13563 968 aa13.39□□□□□ -0.27
POLR1A-207ENST00000483538 THEMISQ8N1K5 641 aaPredicted RBP13.39□□□□□ -0.27
POLR1A-207ENST00000483538 NRXN3Q9Y4C0 1643 aa13.39□□□□□ -0.27
POLR1A-207ENST00000483538 NEXMIFQ5QGS0 1516 aa13.38□□□□□ -0.27
POLR1A-207ENST00000483538 LTKP29376 864 aa13.37□□□□□ -0.27
POLR1A-207ENST00000483538 SLC52A1Q9NWF4 448 aa13.37□□□□□ -0.27
POLR1A-207ENST00000483538 PPLO60437 1756 aa13.37□□□□□ -0.27
POLR1A-207ENST00000483538 TRIM52Q96A61 297 aa13.36□□□□□ -0.27
POLR1A-207ENST00000483538 XIRP1Q702N8 1843 aaKnown RBP13.36□□□□□ -0.27
POLR1A-207ENST00000483538 DMRT2Q9Y5R5 561 aa13.35□□□□□ -0.27
POLR1A-207ENST00000483538 SETD1AO15047 1707 aaKnown RBP13.35□□□□□ -0.27
POLR1A-207ENST00000483538 RIMS2Q9UQ26 1411 aa13.34□□□□□ -0.27
POLR1A-207ENST00000483538 FOXD1Q16676 465 aa13.34□□□□□ -0.27
POLR1A-207ENST00000483538 ANKLE2Q86XL3 938 aa13.34□□□□□ -0.27
POLR1A-207ENST00000483538 SLC4A1APQ9BWU0 796 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms