RNA–Protein interactions for RNA: ENST00000483142.5

HDAC9-224, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 305 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-224ENST00000483142 PRDM15P57071 1507 aaPredicted RBP7.06□□□□□ -1.28
HDAC9-224ENST00000483142 KDM5DQ9BY66 1539 aa7.06□□□□□ -1.28
HDAC9-224ENST00000483142 MROH1Q8NDA8 1641 aa7.06□□□□□ -1.28
HDAC9-224ENST00000483142 ERBINQ96RT1 1412 aa7.06□□□□□ -1.28
HDAC9-224ENST00000483142 SIGLEC1Q9BZZ2 1709 aa7.06□□□□□ -1.28
HDAC9-224ENST00000483142 DUOX2Q9NRD8 1548 aa7.06□□□□□ -1.28
HDAC9-224ENST00000483142 RSPH4AQ5TD94 716 aa7.05□□□□□ -1.28
HDAC9-224ENST00000483142 ZNF219Q9P2Y4 722 aaPredicted RBP7.05□□□□□ -1.28
HDAC9-224ENST00000483142 ZNF644Q9H582 1327 aaPredicted RBP7.04□□□□□ -1.28
HDAC9-224ENST00000483142 VWDEQ8N2E2 1590 aa7.04□□□□□ -1.28
HDAC9-224ENST00000483142 NCOA1Q15788 1441 aa7.04□□□□□ -1.28
HDAC9-224ENST00000483142 ZC3H13Q5T200 1668 aaKnown RBP7.04□□□□□ -1.28
HDAC9-224ENST00000483142 RTN4Q9NQC3 1192 aaKnown RBP7.04□□□□□ -1.28
HDAC9-224ENST00000483142 NAIPQ13075 1403 aa7.03□□□□□ -1.28
HDAC9-224ENST00000483142 YEATS2Q9ULM3 1422 aa7.03□□□□□ -1.28
HDAC9-224ENST00000483142 ANKRD30AQ9BXX3 1397 aa7.02□□□□□ -1.29
HDAC9-224ENST00000483142 A2MP01023 1474 aa7.02□□□□□ -1.29
HDAC9-224ENST00000483142 LMTK2Q8IWU2 1503 aa7.01□□□□□ -1.29
HDAC9-224ENST00000483142 IQGAP3Q86VI3 1631 aa7.01□□□□□ -1.29
HDAC9-224ENST00000483142 ATP10AO60312 1499 aa7.01□□□□□ -1.29
HDAC9-224ENST00000483142 KIF15Q9NS87 1388 aa7.01□□□□□ -1.29
HDAC9-224ENST00000483142 MROH2AA6NES4 1674 aa7□□□□□ -1.29
HDAC9-224ENST00000483142 MKRN4PQ13434 485 aaPredicted RBP7□□□□□ -1.29
HDAC9-224ENST00000483142 PPARGC1BQ86YN6 1023 aaKnown RBP7□□□□□ -1.29
HDAC9-224ENST00000483142 RNF39Q9H2S5 420 aa7□□□□□ -1.29
HDAC9-224ENST00000483142 ANKRD50Q9ULJ7 1429 aa7□□□□□ -1.29
HDAC9-224ENST00000483142 SPAG9O60271 1321 aaKnown RBP7□□□□□ -1.29
HDAC9-224ENST00000483142 TRHP20396 242 aaPredicted RBP6.99□□□□□ -1.29
HDAC9-224ENST00000483142 TET3O43151 1660 aa6.99□□□□□ -1.29
HDAC9-224ENST00000483142 ADAMTSL3P82987 1691 aa6.99□□□□□ -1.29
HDAC9-224ENST00000483142 DHX29Q7Z478 1369 aaKnown RBP6.98□□□□□ -1.29
HDAC9-224ENST00000483142 HNRNPMP52272 730 aaKnown RBP eCLIP6.98□□□□□ -1.29
HDAC9-224ENST00000483142 ZNF777Q9ULD5 760 aaPredicted RBP6.98□□□□□ -1.29
HDAC9-224ENST00000483142 ABCC3O15438 1527 aa6.97□□□□□ -1.29
HDAC9-224ENST00000483142 EFCAB6Q5THR3 1501 aa6.97□□□□□ -1.29
HDAC9-224ENST00000483142 TRIM26Q12899 539 aaPredicted RBP6.97□□□□□ -1.29
HDAC9-224ENST00000483142 FAM50AQ14320 339 aaKnown RBP6.97□□□□□ -1.29
HDAC9-224ENST00000483142 AFAP1Q8N556 730 aa6.97□□□□□ -1.29
HDAC9-224ENST00000483142 CAMSAP1Q5T5Y3 1602 aa6.97□□□□□ -1.29
HDAC9-224ENST00000483142 CEP152O94986 1710 aa6.96□□□□□ -1.29
HDAC9-224ENST00000483142 FER1L4A9Z1Z3 1794 aa6.96□□□□□ -1.3
HDAC9-224ENST00000483142 RAPGEF3O95398 923 aa6.96□□□□□ -1.3
HDAC9-224ENST00000483142 SPINK5Q9NQ38 1064 aaPredicted RBP6.96□□□□□ -1.3
HDAC9-224ENST00000483142 SETD5Q9C0A6 1442 aa6.95□□□□□ -1.3
HDAC9-224ENST00000483142 TSPY4P0CV99 314 aa6.95□□□□□ -1.3
HDAC9-224ENST00000483142 TSPY10P0CW01 314 aa6.95□□□□□ -1.3
HDAC9-224ENST00000483142 AMER1Q5JTC6 1135 aaPredicted RBP6.95□□□□□ -1.3
HDAC9-224ENST00000483142 PZPP20742 1482 aa6.95□□□□□ -1.3
HDAC9-224ENST00000483142 ACIN1Q9UKV3 1341 aaKnown RBP6.95□□□□□ -1.3
HDAC9-224ENST00000483142 MADDQ8WXG6 1647 aa6.94□□□□□ -1.3
HDAC9-224ENST00000483142 ARHGAP31Q2M1Z3 1444 aa6.94□□□□□ -1.3
HDAC9-224ENST00000483142 RPRD2Q5VT52 1461 aaKnown RBP6.94□□□□□ -1.3
HDAC9-224ENST00000483142 HRCP23327 699 aa6.94□□□□□ -1.3
HDAC9-224ENST00000483142 PROM2Q8N271 834 aa6.94□□□□□ -1.3
HDAC9-224ENST00000483142 RAB3GAP2Q9H2M9 1393 aa6.94□□□□□ -1.3
HDAC9-224ENST00000483142 E9PCH4 1651 aa6.93□□□□□ -1.3
HDAC9-224ENST00000483142 CNTLNQ9NXG0 1405 aa6.93□□□□□ -1.3
HDAC9-224ENST00000483142 SPATA31D1Q6ZQQ2 1576 aa6.93□□□□□ -1.3
HDAC9-224ENST00000483142 NEURL4Q96JN8 1562 aa6.92□□□□□ -1.3
HDAC9-224ENST00000483142 PIK3C2BO00750 1634 aa6.92□□□□□ -1.3
HDAC9-224ENST00000483142 CLTCQ00610 1675 aaKnown RBP6.92□□□□□ -1.3
HDAC9-224ENST00000483142 SPHKAPQ2M3C7 1700 aa6.92□□□□□ -1.3
HDAC9-224ENST00000483142 TRPM2O94759 1503 aa6.91□□□□□ -1.3
HDAC9-224ENST00000483142 ZNF142P52746 1687 aaPredicted RBP6.91□□□□□ -1.3
HDAC9-224ENST00000483142 PREX1Q8TCU6 1659 aa6.91□□□□□ -1.3
HDAC9-224ENST00000483142 C3P01024 1663 aa6.9□□□□□ -1.3
HDAC9-224ENST00000483142 KDM5AP29375 1690 aaKnown RBP6.9□□□□□ -1.3
HDAC9-224ENST00000483142 RIMS1Q86UR5 1692 aaKnown RBP6.9□□□□□ -1.3
HDAC9-224ENST00000483142 NPATQ14207 1427 aa6.9□□□□□ -1.31
HDAC9-224ENST00000483142 RRP7BPQ9NSQ0 103 aa6.89□□□□□ -1.31
HDAC9-224ENST00000483142 CHIC2Q9UKJ5 165 aa6.89□□□□□ -1.31
HDAC9-224ENST00000483142 PTPRTO14522 1441 aa6.89□□□□□ -1.31
HDAC9-224ENST00000483142 NOS1P29475 1434 aa6.89□□□□□ -1.31
HDAC9-224ENST00000483142 ERVK-7P63135 1459 aa6.89□□□□□ -1.31
HDAC9-224ENST00000483142 SYNMO15061 1565 aa6.89□□□□□ -1.31
HDAC9-224ENST00000483142 MYO3AQ8NEV4 1616 aa6.89□□□□□ -1.31
HDAC9-224ENST00000483142 DHX57Q6P158 1386 aaKnown RBP6.88□□□□□ -1.31
HDAC9-224ENST00000483142 KANK1Q14678 1352 aa6.87□□□□□ -1.31
HDAC9-224ENST00000483142 CLTCL1P53675 1640 aa6.87□□□□□ -1.31
HDAC9-224ENST00000483142 ADGRB3O60242 1522 aa6.86□□□□□ -1.31
HDAC9-224ENST00000483142 ITGAEP38570 1179 aa6.86□□□□□ -1.31
HDAC9-224ENST00000483142 C1QBPQ07021 282 aaKnown RBP6.86□□□□□ -1.31
HDAC9-224ENST00000483142 POLA2Q14181 598 aa6.86□□□□□ -1.31
HDAC9-224ENST00000483142 PTPRMP28827 1452 aa6.85□□□□□ -1.31
HDAC9-224ENST00000483142 PLA2R1Q13018 1463 aa6.85□□□□□ -1.31
HDAC9-224ENST00000483142 NUP155O75694 1391 aa6.85□□□□□ -1.31
HDAC9-224ENST00000483142 IFT172Q9UG01 1749 aa6.85□□□□□ -1.31
HDAC9-224ENST00000483142 SPDYE4A6NLX3 237 aa6.85□□□□□ -1.31
HDAC9-224ENST00000483142 KIF3BO15066 747 aa6.85□□□□□ -1.31
HDAC9-224ENST00000483142 NLRP1Q9C000 1473 aa6.84□□□□□ -1.31
HDAC9-224ENST00000483142 CEP170BQ9Y4F5 1589 aaPredicted RBP6.83□□□□□ -1.32
HDAC9-224ENST00000483142 CLSPNQ9HAW4 1339 aa6.83□□□□□ -1.32
HDAC9-224ENST00000483142 UBR1Q8IWV7 1749 aa6.83□□□□□ -1.32
HDAC9-224ENST00000483142 TMEM131LA2VDJ0 1609 aa6.83□□□□□ -1.32
HDAC9-224ENST00000483142 ANKRD30BQ9BXX2 1392 aa6.82□□□□□ -1.32
HDAC9-224ENST00000483142 UGGT1Q9NYU2 1555 aa6.82□□□□□ -1.32
HDAC9-224ENST00000483142 PCGF6Q9BYE7 350 aa6.82□□□□□ -1.32
HDAC9-224ENST00000483142 KIF1BO60333 1816 aa6.81□□□□□ -1.32
HDAC9-224ENST00000483142 A2ML1A8K2U0 1454 aa6.81□□□□□ -1.32
HDAC9-224ENST00000483142 MYT1LQ9UL68 1186 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms