RNA–Protein interactions for RNA: ENST00000482967.5

CDK5RAP1-213, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 3

Gene CDK5RAP1, Length 840 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-213ENST00000482967 RTEL1-TNFRSF6BF6WH68 1400 aa13.93□□□□□ -0.18
CDK5RAP1-213ENST00000482967 CEP162Q5TB80 1403 aa13.93□□□□□ -0.18
CDK5RAP1-213ENST00000482967 HSPA1LP34931 641 aa13.93□□□□□ -0.18
CDK5RAP1-213ENST00000482967 PZPP20742 1482 aa13.93□□□□□ -0.18
CDK5RAP1-213ENST00000482967 SCAF1Q9H7N4 1312 aaKnown RBP13.92□□□□□ -0.18
CDK5RAP1-213ENST00000482967 KDM5DQ9BY66 1539 aa13.92□□□□□ -0.18
CDK5RAP1-213ENST00000482967 KIF3BO15066 747 aa13.91□□□□□ -0.18
CDK5RAP1-213ENST00000482967 PIP4K2BP78356 416 aa13.91□□□□□ -0.18
CDK5RAP1-213ENST00000482967 CCDC141Q6ZP82 1450 aa13.91□□□□□ -0.18
CDK5RAP1-213ENST00000482967 MED1Q15648 1581 aaPredicted RBP13.91□□□□□ -0.18
CDK5RAP1-213ENST00000482967 CPS1P31327 1500 aa13.9□□□□□ -0.18
CDK5RAP1-213ENST00000482967 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.9□□□□□ -0.18
CDK5RAP1-213ENST00000482967 CAMSAP2Q08AD1 1489 aa13.9□□□□□ -0.18
CDK5RAP1-213ENST00000482967 SHANK2Q9UPX8 1470 aa13.9□□□□□ -0.18
CDK5RAP1-213ENST00000482967 POLR1AO95602 1720 aaPredicted RBP13.9□□□□□ -0.18
CDK5RAP1-213ENST00000482967 VWDEQ8N2E2 1590 aa13.88□□□□□ -0.19
CDK5RAP1-213ENST00000482967 NCOA2Q15596 1464 aa13.87□□□□□ -0.19
CDK5RAP1-213ENST00000482967 ALKQ9UM73 1620 aa13.87□□□□□ -0.19
CDK5RAP1-213ENST00000482967 FAM135AQ9P2D6 1515 aa13.87□□□□□ -0.19
CDK5RAP1-213ENST00000482967 MIA2Q96PC5 1412 aa13.87□□□□□ -0.19
CDK5RAP1-213ENST00000482967 WASHC2CQ9Y4E1 1318 aa13.87□□□□□ -0.19
CDK5RAP1-213ENST00000482967 TOM1O60784 492 aa13.86□□□□□ -0.19
CDK5RAP1-213ENST00000482967 NPHP4O75161 1426 aaPredicted RBP13.86□□□□□ -0.19
CDK5RAP1-213ENST00000482967 UGGT1Q9NYU2 1555 aa13.85□□□□□ -0.19
CDK5RAP1-213ENST00000482967 NLRP1Q9C000 1473 aa13.85□□□□□ -0.19
CDK5RAP1-213ENST00000482967 ANKLE2Q86XL3 938 aa13.84□□□□□ -0.19
CDK5RAP1-213ENST00000482967 MED14O60244 1454 aa13.83□□□□□ -0.2
CDK5RAP1-213ENST00000482967 ABCC3O15438 1527 aa13.82□□□□□ -0.2
CDK5RAP1-213ENST00000482967 DEPDC5O75140 1603 aa13.82□□□□□ -0.2
CDK5RAP1-213ENST00000482967 ARHGEF5Q12774 1597 aa13.81□□□□□ -0.2
CDK5RAP1-213ENST00000482967 THEMISQ8N1K5 641 aaPredicted RBP13.81□□□□□ -0.2
CDK5RAP1-213ENST00000482967 SENP3Q9H4L4 574 aaPredicted RBP13.8□□□□□ -0.2
CDK5RAP1-213ENST00000482967 ERVK-7P63135 1459 aa13.8□□□□□ -0.2
CDK5RAP1-213ENST00000482967 RNF17Q9BXT8 1623 aaKnown RBP13.79□□□□□ -0.2
CDK5RAP1-213ENST00000482967 IQGAP1P46940 1657 aa13.79□□□□□ -0.2
CDK5RAP1-213ENST00000482967 RSPH4AQ5TD94 716 aa13.79□□□□□ -0.2
CDK5RAP1-213ENST00000482967 LRRC7Q96NW7 1537 aa13.79□□□□□ -0.2
CDK5RAP1-213ENST00000482967 STRCP1A6NGW2 1772 aa13.78□□□□□ -0.2
CDK5RAP1-213ENST00000482967 MROH1Q8NDA8 1641 aa13.77□□□□□ -0.21
CDK5RAP1-213ENST00000482967 TSPY4P0CV99 314 aa13.76□□□□□ -0.21
CDK5RAP1-213ENST00000482967 TSPY10P0CW01 314 aa13.76□□□□□ -0.21
CDK5RAP1-213ENST00000482967 PHF23Q9BUL5 403 aaPredicted RBP13.76□□□□□ -0.21
CDK5RAP1-213ENST00000482967 SYNMO15061 1565 aa13.75□□□□□ -0.21
CDK5RAP1-213ENST00000482967 ZC3H13Q5T200 1668 aaKnown RBP13.75□□□□□ -0.21
CDK5RAP1-213ENST00000482967 MAST1Q9Y2H9 1570 aa13.75□□□□□ -0.21
CDK5RAP1-213ENST00000482967 LRRC9Q6ZRR7 1453 aa13.74□□□□□ -0.21
CDK5RAP1-213ENST00000482967 SCAF11Q99590 1463 aaKnown RBP13.73□□□□□ -0.21
CDK5RAP1-213ENST00000482967 EIF2AK4Q9P2K8 1649 aaKnown RBP13.72□□□□□ -0.21
CDK5RAP1-213ENST00000482967 CEP152O94986 1710 aa13.71□□□□□ -0.21
CDK5RAP1-213ENST00000482967 UBR1Q8IWV7 1749 aa13.71□□□□□ -0.21
CDK5RAP1-213ENST00000482967 LTKP29376 864 aa13.71□□□□□ -0.21
CDK5RAP1-213ENST00000482967 ARHGAP23Q9P227 1491 aa13.7□□□□□ -0.22
CDK5RAP1-213ENST00000482967 KANK4Q5T7N3 995 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP1-213ENST00000482967 VPS8Q8N3P4 1428 aa13.7□□□□□ -0.22
CDK5RAP1-213ENST00000482967 SLIT1O75093 1534 aa13.69□□□□□ -0.22
CDK5RAP1-213ENST00000482967 MYOM3Q5VTT5 1437 aa13.68□□□□□ -0.22
CDK5RAP1-213ENST00000482967 RGS17Q9UGC6 210 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP1-213ENST00000482967 PRDM15P57071 1507 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP1-213ENST00000482967 DUOX2Q9NRD8 1548 aa13.68□□□□□ -0.22
CDK5RAP1-213ENST00000482967 TXNDC2Q86VQ3 553 aa13.67□□□□□ -0.22
CDK5RAP1-213ENST00000482967 KIF15Q9NS87 1388 aa13.67□□□□□ -0.22
CDK5RAP1-213ENST00000482967 ARHGAP31Q2M1Z3 1444 aa13.66□□□□□ -0.22
CDK5RAP1-213ENST00000482967 XIRP1Q702N8 1843 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP1-213ENST00000482967 PIK3C2BO00750 1634 aa13.64□□□□□ -0.23
CDK5RAP1-213ENST00000482967 ABCC5O15440 1437 aa13.64□□□□□ -0.23
CDK5RAP1-213ENST00000482967 ERBINQ96RT1 1412 aa13.64□□□□□ -0.23
CDK5RAP1-213ENST00000482967 TMEM2Q9UHN6 1383 aa13.63□□□□□ -0.23
CDK5RAP1-213ENST00000482967 RRP7BPQ9NSQ0 103 aa13.63□□□□□ -0.23
CDK5RAP1-213ENST00000482967 CFAP65Q6ZU64 1925 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP1-213ENST00000482967 TMEM94Q12767 1356 aa13.62□□□□□ -0.23
CDK5RAP1-213ENST00000482967 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.62□□□□□ -0.239e-7■■■□□ 18.2
CDK5RAP1-213ENST00000482967 MAP3K1Q13233 1512 aa13.61□□□□□ -0.23
CDK5RAP1-213ENST00000482967 CROCC2H7BZ55 1655 aa13.61□□□□□ -0.23
CDK5RAP1-213ENST00000482967 EID1Q9Y6B2 187 aa13.61□□□□□ -0.23
CDK5RAP1-213ENST00000482967 FAM135BQ49AJ0 1406 aa13.61□□□□□ -0.23
CDK5RAP1-213ENST00000482967 LOC105371045A0A1W2PR82 267 aa13.6□□□□□ -0.23
CDK5RAP1-213ENST00000482967 RBM33Q96EV2 1170 aaKnown RBP13.6□□□□□ -0.23
CDK5RAP1-213ENST00000482967 EFCAB6Q5THR3 1501 aa13.59□□□□□ -0.23
CDK5RAP1-213ENST00000482967 DAPK1P53355 1430 aa13.59□□□□□ -0.23
CDK5RAP1-213ENST00000482967 POTEAQ6S8J7 498 aa13.59□□□□□ -0.23
CDK5RAP1-213ENST00000482967 IDI1Q13907 227 aa13.58□□□□□ -0.24
CDK5RAP1-213ENST00000482967 SLC26A8Q96RN1 970 aa13.58□□□□□ -0.24
CDK5RAP1-213ENST00000482967 STAG3Q9UJ98 1225 aa13.58□□□□□ -0.24
CDK5RAP1-213ENST00000482967 PTPN23Q9H3S7 1636 aa13.57□□□□□ -0.24
CDK5RAP1-213ENST00000482967 KCNA6P17658 529 aa13.57□□□□□ -0.24
CDK5RAP1-213ENST00000482967 LMTK2Q8IWU2 1503 aa13.57□□□□□ -0.24
CDK5RAP1-213ENST00000482967 TET3O43151 1660 aa13.56□□□□□ -0.24
CDK5RAP1-213ENST00000482967 ROBO1Q9Y6N7 1651 aa13.56□□□□□ -0.24
CDK5RAP1-213ENST00000482967 KANK1Q14678 1352 aa13.56□□□□□ -0.24
CDK5RAP1-213ENST00000482967 ADGRB3O60242 1522 aa13.55□□□□□ -0.24
CDK5RAP1-213ENST00000482967 CHIC2Q9UKJ5 165 aa13.55□□□□□ -0.24
CDK5RAP1-213ENST00000482967 NOS1P29475 1434 aa13.55□□□□□ -0.24
CDK5RAP1-213ENST00000482967 NWD1Q149M9 1564 aa13.54□□□□□ -0.24
CDK5RAP1-213ENST00000482967 PROSER2Q86WR7 435 aaPredicted RBP13.54□□□□□ -0.24
CDK5RAP1-213ENST00000482967 FGD6Q6ZV73 1430 aa13.54□□□□□ -0.24
CDK5RAP1-213ENST00000482967 NKTRP30414 1462 aaKnown RBP13.54□□□□□ -0.24
CDK5RAP1-213ENST00000482967 KDM5AP29375 1690 aaKnown RBP13.53□□□□□ -0.24
CDK5RAP1-213ENST00000482967 ANKRD30AQ9BXX3 1397 aa13.52□□□□□ -0.25
CDK5RAP1-213ENST00000482967 ZFYVE9O95405 1425 aa13.49□□□□□ -0.25
CDK5RAP1-213ENST00000482967 MSH6P52701 1360 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms