RNA–Protein interactions for RNA: ENST00000482889.1

CLCC1-209, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 752 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-209ENST00000482889 BCL2L12Q9HB09 334 aa7.37□□□□□ -1.23
CLCC1-209ENST00000482889 TYW1BQ6NUM6 668 aa7.36□□□□□ -1.23
CLCC1-209ENST00000482889 POTEEQ6S8J3 1075 aa7.36□□□□□ -1.23
CLCC1-209ENST00000482889 ZDHHC16Q969W1 377 aa7.36□□□□□ -1.23
CLCC1-209ENST00000482889 PCDHGA10Q9Y5H3 936 aa7.36□□□□□ -1.23
CLCC1-209ENST00000482889 ARHGAP33O14559 1287 aa7.35□□□□□ -1.23
CLCC1-209ENST00000482889 ZMYND10O75800 440 aa7.35□□□□□ -1.23
CLCC1-209ENST00000482889 NEUROD2Q15784 382 aa7.35□□□□□ -1.23
CLCC1-209ENST00000482889 C14orf37Q86TY3 774 aa7.34□□□□□ -1.23
CLCC1-209ENST00000482889 RNF166Q96A37 237 aaPredicted RBP7.34□□□□□ -1.23
CLCC1-209ENST00000482889 MLLT3P42568 568 aaPredicted RBP7.33□□□□□ -1.24
CLCC1-209ENST00000482889 LSM11P83369 360 aaKnown RBP eCLIP7.33□□□□□ -1.24
CLCC1-209ENST00000482889 ADAM33Q9BZ11 813 aa7.33□□□□□ -1.24
CLCC1-209ENST00000482889 PTPREP23469 700 aa7.32□□□□□ -1.24
CLCC1-209ENST00000482889 DDX12PQ92771 950 aa7.32□□□□□ -1.24
CLCC1-209ENST00000482889 KCNH8Q96L42 1107 aa7.32□□□□□ -1.24
CLCC1-209ENST00000482889 RBM26Q5T8P6 1007 aaKnown RBP7.31□□□□□ -1.24
CLCC1-209ENST00000482889 BARGINQ6ZT62 677 aa7.31□□□□□ -1.24
CLCC1-209ENST00000482889 AXIN2Q9Y2T1 843 aa7.31□□□□□ -1.24
CLCC1-209ENST00000482889 TK2O00142 265 aa7.3□□□□□ -1.24
CLCC1-209ENST00000482889 EN1Q05925 392 aaPredicted RBP7.3□□□□□ -1.24
CLCC1-209ENST00000482889 KCNK17Q96T54 332 aa7.3□□□□□ -1.24
CLCC1-209ENST00000482889 OSBPP22059 807 aa7.29□□□□□ -1.24
CLCC1-209ENST00000482889 PSEN2P49810 448 aa7.29□□□□□ -1.24
CLCC1-209ENST00000482889 SLC4A5Q9BY07 1137 aa7.29□□□□□ -1.24
CLCC1-209ENST00000482889 GRXCR2A6NFK2 248 aa7.28□□□□□ -1.24
CLCC1-209ENST00000482889 PPP1R3GB7ZBB8 358 aa7.28□□□□□ -1.24
CLCC1-209ENST00000482889 GPBP1L1Q9HC44 474 aaPredicted RBP7.28□□□□□ -1.24
CLCC1-209ENST00000482889 C6orf132Q5T0Z8 1188 aa7.27□□□□□ -1.25
CLCC1-209ENST00000482889 DMRTA1Q5VZB9 504 aa7.27□□□□□ -1.25
CLCC1-209ENST00000482889 MYT1LQ9UL68 1186 aa7.27□□□□□ -1.25
CLCC1-209ENST00000482889 ADGRD1Q6QNK2 874 aa7.26□□□□□ -1.25
CLCC1-209ENST00000482889 ANKRD13DQ6ZTN6 518 aa7.26□□□□□ -1.25
CLCC1-209ENST00000482889 ZBED2Q9BTP6 218 aa7.26□□□□□ -1.25
CLCC1-209ENST00000482889 SUPT5HO00267 1087 aaKnown RBP7.25□□□□□ -1.25
CLCC1-209ENST00000482889 MAP3K7O43318 606 aa7.25□□□□□ -1.25
CLCC1-209ENST00000482889 ERICH6Q7L0X2 663 aa7.25□□□□□ -1.25
CLCC1-209ENST00000482889 ONECUT3O60422 494 aaPredicted RBP7.24□□□□□ -1.25
CLCC1-209ENST00000482889 PRIM1P49642 420 aaKnown RBP7.24□□□□□ -1.25
CLCC1-209ENST00000482889 CERKQ8TCT0 537 aa7.24□□□□□ -1.25
CLCC1-209ENST00000482889 RBM33Q96EV2 1170 aaKnown RBP7.24□□□□□ -1.25
CLCC1-209ENST00000482889 ARXQ96QS3 562 aa7.24□□□□□ -1.25
CLCC1-209ENST00000482889 VPS9D1Q9Y2B5 631 aa7.24□□□□□ -1.25
CLCC1-209ENST00000482889 HRO43593 1189 aa7.23□□□□□ -1.25
CLCC1-209ENST00000482889 COL9A1P20849 921 aa7.23□□□□□ -1.25
CLCC1-209ENST00000482889 SMYD5Q6GMV2 418 aa7.23□□□□□ -1.25
CLCC1-209ENST00000482889 TSR1Q2NL82 804 aaKnown RBP7.22□□□□□ -1.25
CLCC1-209ENST00000482889 IL27Q8NEV9 243 aa7.21□□□□□ -1.26
CLCC1-209ENST00000482889 BHMG1C9JSJ3 638 aaPredicted RBP7.2□□□□□ -1.26
CLCC1-209ENST00000482889 TRIM66O15016 1216 aa7.2□□□□□ -1.26
CLCC1-209ENST00000482889 GPR37O15354 613 aa7.2□□□□□ -1.26
CLCC1-209ENST00000482889 GPIHBP1Q8IV16 184 aa7.2□□□□□ -1.26
CLCC1-209ENST00000482889 AK7Q96M32 723 aa7.2□□□□□ -1.26
CLCC1-209ENST00000482889 RBM27Q9P2N5 1060 aaKnown RBP7.2□□□□□ -1.26
CLCC1-209ENST00000482889 RABGEF1Q9UJ41 708 aa7.19□□□□□ -1.26
CLCC1-209ENST00000482889 TRIM6-TRIM34B2RNG4 842 aa7.18□□□□□ -1.26
CLCC1-209ENST00000482889 PROX2Q3B8N5 592 aa7.18□□□□□ -1.26
CLCC1-209ENST00000482889 KRI1Q8N9T8 703 aaKnown RBP7.18□□□□□ -1.26
CLCC1-209ENST00000482889 NBPF3Q9H094 633 aa7.18□□□□□ -1.26
CLCC1-209ENST00000482889 CDHR5Q9HBB8 845 aa7.18□□□□□ -1.26
CLCC1-209ENST00000482889 NPDC1Q9NQX5 325 aaPredicted RBP7.18□□□□□ -1.26
CLCC1-209ENST00000482889 PRSS12P56730 875 aa7.17□□□□□ -1.26
CLCC1-209ENST00000482889 KDM4CQ9H3R0 1056 aa7.17□□□□□ -1.26
CLCC1-209ENST00000482889 PDE4DQ08499 809 aa7.16□□□□□ -1.26
CLCC1-209ENST00000482889 CDCA7LQ96GN5 454 aa7.16□□□□□ -1.26
CLCC1-209ENST00000482889 STAC3Q96MF2 364 aa7.16□□□□□ -1.26
CLCC1-209ENST00000482889 PTGDRQ13258 359 aa7.15□□□□□ -1.26
CLCC1-209ENST00000482889 LAPTM4BQ86VI4 370 aa7.15□□□□□ -1.26
CLCC1-209ENST00000482889 TTC13Q8NBP0 860 aa7.15□□□□□ -1.26
CLCC1-209ENST00000482889 TSKSQ9UJT2 592 aa7.15□□□□□ -1.26
CLCC1-209ENST00000482889 MRPL50Q8N5N7 158 aaKnown RBP7.14□□□□□ -1.27
CLCC1-209ENST00000482889 KIAA1468Q9P260 1216 aa7.14□□□□□ -1.27
CLCC1-209ENST00000482889 NUTM2FA1L443 756 aa7.13□□□□□ -1.27
CLCC1-209ENST00000482889 FCHSD2O94868 740 aa7.13□□□□□ -1.27
CLCC1-209ENST00000482889 PACS2Q86VP3 889 aa7.13□□□□□ -1.27
CLCC1-209ENST00000482889 FAM117AQ9C073 453 aa7.13□□□□□ -1.27
CLCC1-209ENST00000482889 HOMEZQ8IX15 550 aa7.12□□□□□ -1.27
CLCC1-209ENST00000482889 FAM198AQ9UFP1 575 aa7.12□□□□□ -1.27
CLCC1-209ENST00000482889 NBPF26B4DH59 902 aa7.11□□□□□ -1.27
CLCC1-209ENST00000482889 FECHP22830 423 aa7.11□□□□□ -1.27
CLCC1-209ENST00000482889 PLEKHG3A1L390 1219 aa7.1□□□□□ -1.27
CLCC1-209ENST00000482889 HIC1Q14526 733 aa7.1□□□□□ -1.27
CLCC1-209ENST00000482889 FAM98CQ17RN3 349 aaKnown RBP7.1□□□□□ -1.27
CLCC1-209ENST00000482889 PADI6Q6TGC4 694 aa7.1□□□□□ -1.27
CLCC1-209ENST00000482889 GOLGA8CPA6NN73 597 aa7.09□□□□□ -1.27
CLCC1-209ENST00000482889 TATDN2Q93075 761 aa7.09□□□□□ -1.27
CLCC1-209ENST00000482889 WNT2BQ93097 391 aa7.07□□□□□ -1.28
CLCC1-209ENST00000482889 KCTD12Q96CX2 325 aaKnown RBP7.07□□□□□ -1.28
CLCC1-209ENST00000482889 ZFRQ96KR1 1074 aaKnown RBP7.07□□□□□ -1.28
CLCC1-209ENST00000482889 SEPT9Q9UHD8 586 aaPredicted RBP7.07□□□□□ -1.28
CLCC1-209ENST00000482889 PNMA3Q9UL41 463 aa7.07□□□□□ -1.28
CLCC1-209ENST00000482889 GNPATO15228 680 aa7.06□□□□□ -1.28
CLCC1-209ENST00000482889 THSD4Q6ZMP0 1018 aa7.06□□□□□ -1.28
CLCC1-209ENST00000482889 NUDT18Q6ZVK8 323 aa7.06□□□□□ -1.28
CLCC1-209ENST00000482889 ANKK1Q8NFD2 765 aa7.06□□□□□ -1.28
CLCC1-209ENST00000482889 CCDC102AQ96A19 550 aa7.06□□□□□ -1.28
CLCC1-209ENST00000482889 ZMYND15Q9H091 742 aa7.06□□□□□ -1.28
CLCC1-209ENST00000482889 PLA2G2EQ9NZK7 142 aa7.06□□□□□ -1.28
CLCC1-209ENST00000482889 HCSTQ9UBK5 93 aa7.06□□□□□ -1.28
CLCC1-209ENST00000482889 C3orf80F5H4A9 247 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms