RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 TNRQ92752 1358 aa20.54■□□□□ 0.88
TMEM54-206ENST00000482771 ZNF142P52746 1687 aaPredicted RBP20.54■□□□□ 0.88
TMEM54-206ENST00000482771 ADGBQ8N7X0 1667 aa20.54■□□□□ 0.88
TMEM54-206ENST00000482771 TOM1O60784 492 aa20.53■□□□□ 0.88
TMEM54-206ENST00000482771 HSPA1LP34931 641 aa20.53■□□□□ 0.88
TMEM54-206ENST00000482771 THEMISQ8N1K5 641 aaPredicted RBP20.53■□□□□ 0.88
TMEM54-206ENST00000482771 TIAM1Q13009 1591 aa20.53■□□□□ 0.88
TMEM54-206ENST00000482771 CEP162Q5TB80 1403 aa20.53■□□□□ 0.88
TMEM54-206ENST00000482771 TSPY4P0CV99 314 aa20.51■□□□□ 0.87
TMEM54-206ENST00000482771 TSPY10P0CW01 314 aa20.51■□□□□ 0.87
TMEM54-206ENST00000482771 DNMT1P26358 1616 aaKnown RBP20.5■□□□□ 0.87
TMEM54-206ENST00000482771 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.49■□□□□ 0.87
TMEM54-206ENST00000482771 EHBP1L1Q8N3D4 1523 aa20.48■□□□□ 0.87
TMEM54-206ENST00000482771 MIA2Q96PC5 1412 aa20.47■□□□□ 0.87
TMEM54-206ENST00000482771 CCDC141Q6ZP82 1450 aa20.46■□□□□ 0.87
TMEM54-206ENST00000482771 SHANK2Q9UPX8 1470 aa20.46■□□□□ 0.87
TMEM54-206ENST00000482771 PZPP20742 1482 aa20.45■□□□□ 0.86
TMEM54-206ENST00000482771 NCOA2Q15596 1464 aa20.44■□□□□ 0.86
TMEM54-206ENST00000482771 CAMSAP2Q08AD1 1489 aa20.43■□□□□ 0.86
TMEM54-206ENST00000482771 KDM5DQ9BY66 1539 aa20.42■□□□□ 0.86
TMEM54-206ENST00000482771 CPS1P31327 1500 aa20.41■□□□□ 0.86
TMEM54-206ENST00000482771 NEURL4Q96JN8 1562 aa20.39■□□□□ 0.85
TMEM54-206ENST00000482771 NPHP4O75161 1426 aaPredicted RBP20.39■□□□□ 0.85
TMEM54-206ENST00000482771 NLRP1Q9C000 1473 aa20.38■□□□□ 0.85
TMEM54-206ENST00000482771 FAM135AQ9P2D6 1515 aa20.37■□□□□ 0.85
TMEM54-206ENST00000482771 SENP3Q9H4L4 574 aaPredicted RBP20.37■□□□□ 0.85
TMEM54-206ENST00000482771 UGGT1Q9NYU2 1555 aa20.37■□□□□ 0.85
TMEM54-206ENST00000482771 MED14O60244 1454 aa20.35■□□□□ 0.85
TMEM54-206ENST00000482771 POLR1AO95602 1720 aaPredicted RBP20.34■□□□□ 0.85
TMEM54-206ENST00000482771 VWDEQ8N2E2 1590 aa20.34■□□□□ 0.85
TMEM54-206ENST00000482771 PHF23Q9BUL5 403 aaPredicted RBP20.33■□□□□ 0.85
TMEM54-206ENST00000482771 LOC105371045A0A1W2PR82 267 aa20.32■□□□□ 0.84
TMEM54-206ENST00000482771 KANK4Q5T7N3 995 aaPredicted RBP20.32■□□□□ 0.84
TMEM54-206ENST00000482771 ARHGEF5Q12774 1597 aa20.32■□□□□ 0.84
TMEM54-206ENST00000482771 TXNDC2Q86VQ3 553 aa20.29■□□□□ 0.84
TMEM54-206ENST00000482771 MED1Q15648 1581 aaPredicted RBP20.29■□□□□ 0.84
TMEM54-206ENST00000482771 LRRC9Q6ZRR7 1453 aa20.28■□□□□ 0.84
TMEM54-206ENST00000482771 DEPDC5O75140 1603 aa20.27■□□□□ 0.84
TMEM54-206ENST00000482771 LTKP29376 864 aa20.27■□□□□ 0.84
TMEM54-206ENST00000482771 ABCC3O15438 1527 aa20.27■□□□□ 0.83
TMEM54-206ENST00000482771 LRRC7Q96NW7 1537 aa20.25■□□□□ 0.83
TMEM54-206ENST00000482771 ERVK-7P63135 1459 aa20.24■□□□□ 0.83
TMEM54-206ENST00000482771 ALKQ9UM73 1620 aa20.24■□□□□ 0.83
TMEM54-206ENST00000482771 CFAP65Q6ZU64 1925 aaKnown RBP20.24■□□□□ 0.83
TMEM54-206ENST00000482771 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.83
TMEM54-206ENST00000482771 RRP7BPQ9NSQ0 103 aa20.24■□□□□ 0.83
TMEM54-206ENST00000482771 EID1Q9Y6B2 187 aa20.23■□□□□ 0.83
TMEM54-206ENST00000482771 IQGAP1P46940 1657 aa20.22■□□□□ 0.83
TMEM54-206ENST00000482771 VPS8Q8N3P4 1428 aa20.22■□□□□ 0.83
TMEM54-206ENST00000482771 RNF17Q9BXT8 1623 aaKnown RBP20.21■□□□□ 0.83
TMEM54-206ENST00000482771 MYOM3Q5VTT5 1437 aa20.2■□□□□ 0.82
TMEM54-206ENST00000482771 STAG3Q9UJ98 1225 aa20.2■□□□□ 0.82
TMEM54-206ENST00000482771 MAST1Q9Y2H9 1570 aa20.2■□□□□ 0.82
TMEM54-206ENST00000482771 STRCP1A6NGW2 1772 aa20.19■□□□□ 0.82
TMEM54-206ENST00000482771 SCAF11Q99590 1463 aaKnown RBP20.18■□□□□ 0.82
TMEM54-206ENST00000482771 KIF15Q9NS87 1388 aa20.16■□□□□ 0.82
TMEM54-206ENST00000482771 DUOX2Q9NRD8 1548 aa20.16■□□□□ 0.82
TMEM54-206ENST00000482771 MROH1Q8NDA8 1641 aa20.16■□□□□ 0.82
TMEM54-206ENST00000482771 ZC3H13Q5T200 1668 aaKnown RBP20.16■□□□□ 0.82
TMEM54-206ENST00000482771 EIF2AK4Q9P2K8 1649 aaKnown RBP20.15■□□□□ 0.82
TMEM54-206ENST00000482771 ARHGAP31Q2M1Z3 1444 aa20.14■□□□□ 0.81
TMEM54-206ENST00000482771 IDI1Q13907 227 aa20.14■□□□□ 0.81
TMEM54-206ENST00000482771 RGS17Q9UGC6 210 aaPredicted RBP20.14■□□□□ 0.81
TMEM54-206ENST00000482771 ABCC5O15440 1437 aa20.13■□□□□ 0.81
TMEM54-206ENST00000482771 CHIC2Q9UKJ5 165 aa20.13■□□□□ 0.81
TMEM54-206ENST00000482771 UBR1Q8IWV7 1749 aa20.13■□□□□ 0.81
TMEM54-206ENST00000482771 ARHGAP23Q9P227 1491 aa20.12■□□□□ 0.81
TMEM54-206ENST00000482771 APLP2Q06481 763 aa20.12■□□□□ 0.81
TMEM54-206ENST00000482771 CEP152O94986 1710 aa20.12■□□□□ 0.81
TMEM54-206ENST00000482771 MAP3K1Q13233 1512 aa20.12■□□□□ 0.81
TMEM54-206ENST00000482771 TMEM2Q9UHN6 1383 aa20.11■□□□□ 0.81
TMEM54-206ENST00000482771 SLIT1O75093 1534 aa20.11■□□□□ 0.81
TMEM54-206ENST00000482771 KANK1Q14678 1352 aa20.1■□□□□ 0.81
TMEM54-206ENST00000482771 KCNA6P17658 529 aa20.1■□□□□ 0.81
TMEM54-206ENST00000482771 PROSER2Q86WR7 435 aaPredicted RBP20.1■□□□□ 0.81
TMEM54-206ENST00000482771 RBM33Q96EV2 1170 aaKnown RBP20.1■□□□□ 0.81
TMEM54-206ENST00000482771 SLC26A8Q96RN1 970 aa20.1■□□□□ 0.81
TMEM54-206ENST00000482771 ERBINQ96RT1 1412 aa20.08■□□□□ 0.8
TMEM54-206ENST00000482771 SYNMO15061 1565 aa20.08■□□□□ 0.8
TMEM54-206ENST00000482771 BCANQ96GW7 911 aa20.07■□□□□ 0.8
TMEM54-206ENST00000482771 TMEM94Q12767 1356 aa20.07■□□□□ 0.8
TMEM54-206ENST00000482771 FAM135BQ49AJ0 1406 aa20.06■□□□□ 0.8
TMEM54-206ENST00000482771 DAPK1P53355 1430 aa20.03■□□□□ 0.8
TMEM54-206ENST00000482771 PRDM15P57071 1507 aaPredicted RBP20.03■□□□□ 0.8
TMEM54-206ENST00000482771 ANKRD30AQ9BXX3 1397 aa20.03■□□□□ 0.8
TMEM54-206ENST00000482771 PIK3C2BO00750 1634 aa20.02■□□□□ 0.79
TMEM54-206ENST00000482771 POTEAQ6S8J7 498 aa20.01■□□□□ 0.79
TMEM54-206ENST00000482771 SLC52A1Q9NWF4 448 aa20.01■□□□□ 0.79
TMEM54-206ENST00000482771 PTPN23Q9H3S7 1636 aa20■□□□□ 0.79
TMEM54-206ENST00000482771 XIRP1Q702N8 1843 aaKnown RBP19.99■□□□□ 0.79
TMEM54-206ENST00000482771 EFCAB6Q5THR3 1501 aa19.99■□□□□ 0.79
TMEM54-206ENST00000482771 SLAIN2Q9P270 581 aa19.98■□□□□ 0.79
TMEM54-206ENST00000482771 FGD6Q6ZV73 1430 aa19.98■□□□□ 0.79
TMEM54-206ENST00000482771 TET3O43151 1660 aa19.96■□□□□ 0.79
TMEM54-206ENST00000482771 NOS1P29475 1434 aa19.95■□□□□ 0.78
TMEM54-206ENST00000482771 HDGFP51858 240 aaKnown RBP19.95■□□□□ 0.78
TMEM54-206ENST00000482771 FAM50AQ14320 339 aaKnown RBP19.95■□□□□ 0.78
TMEM54-206ENST00000482771 LMTK2Q8IWU2 1503 aa19.95■□□□□ 0.78
TMEM54-206ENST00000482771 CROCC2H7BZ55 1655 aa19.93■□□□□ 0.78
TMEM54-206ENST00000482771 MSH6P52701 1360 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms