RNA–Protein interactions for RNA: ENST00000482747.1

NELFCD-208, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 2

Gene NELFCD, Length 1,701 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-208ENST00000482747 DUOX2Q9NRD8 1548 aa26.11■■□□□ 1.77
NELFCD-208ENST00000482747 MROH2AA6NES4 1674 aa26.1■■□□□ 1.77
NELFCD-208ENST00000482747 ANKRD30AQ9BXX3 1397 aa26.09■■□□□ 1.77
NELFCD-208ENST00000482747 PPP6R1Q9UPN7 881 aa26.09■■□□□ 1.77
NELFCD-208ENST00000482747 NCOA1Q15788 1441 aa26.08■■□□□ 1.77
NELFCD-208ENST00000482747 PREX1Q8TCU6 1659 aa26.07■■□□□ 1.76
NELFCD-208ENST00000482747 FBXO31Q5XUX0 539 aaPredicted RBP26.05■■□□□ 1.76
NELFCD-208ENST00000482747 KDM5DQ9BY66 1539 aa26.05■■□□□ 1.76
NELFCD-208ENST00000482747 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.05■■□□□ 1.761e-7■■□□□ 12.3
NELFCD-208ENST00000482747 UHRF1BP1Q6BDS2 1440 aa26.04■■□□□ 1.76
NELFCD-208ENST00000482747 EIF2AK4Q9P2K8 1649 aaKnown RBP26.04■■□□□ 1.76
NELFCD-208ENST00000482747 SETD1BQ9UPS6 1966 aaKnown RBP26.04■■□□□ 1.76
NELFCD-208ENST00000482747 RNF17Q9BXT8 1623 aaKnown RBP26.03■■□□□ 1.76
NELFCD-208ENST00000482747 MROH1Q8NDA8 1641 aa26.03■■□□□ 1.76
NELFCD-208ENST00000482747 ERBINQ96RT1 1412 aa26.02■■□□□ 1.76
NELFCD-208ENST00000482747 ADGRL2O95490 1459 aa26.02■■□□□ 1.76
NELFCD-208ENST00000482747 NPATQ14207 1427 aa25.99■■□□□ 1.75
NELFCD-208ENST00000482747 ABCC3O15438 1527 aa25.98■■□□□ 1.75
NELFCD-208ENST00000482747 RRBP1Q9P2E9 1410 aaKnown RBP25.96■■□□□ 1.75
NELFCD-208ENST00000482747 CEP152O94986 1710 aa25.96■■□□□ 1.75
NELFCD-208ENST00000482747 ANKRD50Q9ULJ7 1429 aa25.94■■□□□ 1.74
NELFCD-208ENST00000482747 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.93■■□□□ 1.74
NELFCD-208ENST00000482747 PZPP20742 1482 aa25.93■■□□□ 1.74
NELFCD-208ENST00000482747 PRDM15P57071 1507 aaPredicted RBP25.92■■□□□ 1.74
NELFCD-208ENST00000482747 FAM135AQ9P2D6 1515 aa25.92■■□□□ 1.74
NELFCD-208ENST00000482747 MYO3AQ8NEV4 1616 aa25.91■■□□□ 1.74
NELFCD-208ENST00000482747 CFAP65Q6ZU64 1925 aaKnown RBP25.9■■□□□ 1.74
NELFCD-208ENST00000482747 DEPDC5O75140 1603 aa25.89■■□□□ 1.74
NELFCD-208ENST00000482747 TNRQ92752 1358 aa25.89■■□□□ 1.74
NELFCD-208ENST00000482747 ZC3H13Q5T200 1668 aaKnown RBP25.89■■□□□ 1.74
NELFCD-208ENST00000482747 ROCK1Q13464 1354 aa25.88■■□□□ 1.73
NELFCD-208ENST00000482747 CAMSAP1Q5T5Y3 1602 aa25.88■■□□□ 1.73
NELFCD-208ENST00000482747 KANK1Q14678 1352 aa25.86■■□□□ 1.73
NELFCD-208ENST00000482747 STRCQ7RTU9 1775 aa25.85■■□□□ 1.73
NELFCD-208ENST00000482747 CEP170BQ9Y4F5 1589 aaPredicted RBP25.84■■□□□ 1.73
NELFCD-208ENST00000482747 ERVK-7P63135 1459 aa25.81■■□□□ 1.72
NELFCD-208ENST00000482747 ZNF142P52746 1687 aaPredicted RBP25.8■■□□□ 1.72
NELFCD-208ENST00000482747 VWDEQ8N2E2 1590 aa25.8■■□□□ 1.72
NELFCD-208ENST00000482747 NCKAP5LQ9HCH0 1330 aa25.8■■□□□ 1.72
NELFCD-208ENST00000482747 A2ML1A8K2U0 1454 aa25.79■■□□□ 1.72
NELFCD-208ENST00000482747 SPATA31D1Q6ZQQ2 1576 aa25.78■■□□□ 1.72
NELFCD-208ENST00000482747 ARHGAP31Q2M1Z3 1444 aa25.76■■□□□ 1.71
NELFCD-208ENST00000482747 LMTK2Q8IWU2 1503 aa25.75■■□□□ 1.71
NELFCD-208ENST00000482747 UNC13BO14795 1591 aa25.72■■□□□ 1.71
NELFCD-208ENST00000482747 NLRP1Q9C000 1473 aa25.72■■□□□ 1.71
NELFCD-208ENST00000482747 NAIPQ13075 1403 aa25.71■■□□□ 1.71
NELFCD-208ENST00000482747 NUP155O75694 1391 aa25.71■■□□□ 1.71
NELFCD-208ENST00000482747 EFCAB6Q5THR3 1501 aa25.71■■□□□ 1.71
NELFCD-208ENST00000482747 UGGT1Q9NYU2 1555 aa25.7■■□□□ 1.71
NELFCD-208ENST00000482747 DMRT2Q9Y5R5 561 aa25.69■■□□□ 1.7
NELFCD-208ENST00000482747 THEMISQ8N1K5 641 aaPredicted RBP25.67■■□□□ 1.7
NELFCD-208ENST00000482747 PLA2R1Q13018 1463 aa25.67■■□□□ 1.7
NELFCD-208ENST00000482747 TET3O43151 1660 aa25.64■■□□□ 1.7
NELFCD-208ENST00000482747 IDI1Q13907 227 aa25.64■■□□□ 1.7
NELFCD-208ENST00000482747 SYNMO15061 1565 aa25.64■■□□□ 1.69
NELFCD-208ENST00000482747 PTPRTO14522 1441 aa25.63■■□□□ 1.69
NELFCD-208ENST00000482747 PKD2Q13563 968 aa25.63■■□□□ 1.69
NELFCD-208ENST00000482747 IQGAP3Q86VI3 1631 aa25.63■■□□□ 1.69
NELFCD-208ENST00000482747 GCC2Q8IWJ2 1684 aa25.62■■□□□ 1.69
NELFCD-208ENST00000482747 HFM1A2PYH4 1435 aa25.62■■□□□ 1.69
NELFCD-208ENST00000482747 NOS1P29475 1434 aa25.62■■□□□ 1.69
NELFCD-208ENST00000482747 PIK3C2BO00750 1634 aa25.6■■□□□ 1.69
NELFCD-208ENST00000482747 UBR1Q8IWV7 1749 aa25.6■■□□□ 1.69
NELFCD-208ENST00000482747 E9PCH4 1651 aa25.6■■□□□ 1.69
NELFCD-208ENST00000482747 ANKLE2Q86XL3 938 aa25.6■■□□□ 1.69
NELFCD-208ENST00000482747 STAG3Q9UJ98 1225 aa25.6■■□□□ 1.69
NELFCD-208ENST00000482747 TRIM52Q96A61 297 aa25.58■■□□□ 1.69
NELFCD-208ENST00000482747 RPRD2Q5VT52 1461 aaKnown RBP25.58■■□□□ 1.68
NELFCD-208ENST00000482747 NEURL4Q96JN8 1562 aa25.57■■□□□ 1.68
NELFCD-208ENST00000482747 POLR1AO95602 1720 aaPredicted RBP25.56■■□□□ 1.68
NELFCD-208ENST00000482747 ZNF335Q9H4Z2 1342 aaPredicted RBP25.55■■□□□ 1.68
NELFCD-208ENST00000482747 ILDR1Q86SU0 546 aaPredicted RBP25.54■■□□□ 1.68
NELFCD-208ENST00000482747 LTKP29376 864 aa25.54■■□□□ 1.68
NELFCD-208ENST00000482747 CERKQ8TCT0 537 aa25.52■■□□□ 1.68
NELFCD-208ENST00000482747 SLC52A1Q9NWF4 448 aa25.52■■□□□ 1.68
NELFCD-208ENST00000482747 TXNDC2Q86VQ3 553 aa25.51■■□□□ 1.67
NELFCD-208ENST00000482747 CHGAP10645 457 aaKnown RBP25.5■■□□□ 1.67
NELFCD-208ENST00000482747 SENP3Q9H4L4 574 aaPredicted RBP25.5■■□□□ 1.67
NELFCD-208ENST00000482747 NPHP4O75161 1426 aaPredicted RBP25.49■■□□□ 1.67
NELFCD-208ENST00000482747 TMEM2Q9UHN6 1383 aa25.48■■□□□ 1.67
NELFCD-208ENST00000482747 ARHGAP23Q9P227 1491 aa25.47■■□□□ 1.67
NELFCD-208ENST00000482747 SLIT1O75093 1534 aa25.46■■□□□ 1.67
NELFCD-208ENST00000482747 LTBP4Q8N2S1 1624 aa25.46■■□□□ 1.67
NELFCD-208ENST00000482747 ADGRB3O60242 1522 aa25.45■■□□□ 1.67
NELFCD-208ENST00000482747 SLC4A1APQ9BWU0 796 aaKnown RBP25.45■■□□□ 1.66
NELFCD-208ENST00000482747 MED14O60244 1454 aa25.45■■□□□ 1.66
NELFCD-208ENST00000482747 SCAF11Q99590 1463 aaKnown RBP25.45■■□□□ 1.66
NELFCD-208ENST00000482747 MYO5BQ9ULV0 1848 aa25.44■■□□□ 1.66
NELFCD-208ENST00000482747 EID1Q9Y6B2 187 aa25.44■■□□□ 1.66
NELFCD-208ENST00000482747 FOXD1Q16676 465 aa25.43■■□□□ 1.66
NELFCD-208ENST00000482747 IQGAP1P46940 1657 aa25.42■■□□□ 1.66
NELFCD-208ENST00000482747 NUTM2DQ5VT03 806 aaPredicted RBP25.41■■□□□ 1.66
NELFCD-208ENST00000482747 KDM5AP29375 1690 aaKnown RBP25.4■■□□□ 1.66
NELFCD-208ENST00000482747 TMEM131LA2VDJ0 1609 aa25.4■■□□□ 1.66
NELFCD-208ENST00000482747 SPHKAPQ2M3C7 1700 aa25.4■■□□□ 1.66
NELFCD-208ENST00000482747 FBXO41Q8TF61 875 aa25.4■■□□□ 1.66
NELFCD-208ENST00000482747 SETD5Q9C0A6 1442 aa25.4■■□□□ 1.66
NELFCD-208ENST00000482747 SLC26A8Q96RN1 970 aa25.35■■□□□ 1.65
NELFCD-208ENST00000482747 RAB3GAP2Q9H2M9 1393 aa25.35■■□□□ 1.65
NELFCD-208ENST00000482747 BCANQ96GW7 911 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms