RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 CEBPAP49715 358 aaPredicted RBP31.81■■■□□ 2.68
SEC13-217ENST00000482647 ERBINQ96RT1 1412 aa31.8■■■□□ 2.68
SEC13-217ENST00000482647 ROCK1Q13464 1354 aa31.78■■■□□ 2.68
SEC13-217ENST00000482647 WASHC2CQ9Y4E1 1318 aa31.76■■■□□ 2.68
SEC13-217ENST00000482647 ZMYM3Q14202 1370 aa31.76■■■□□ 2.67
SEC13-217ENST00000482647 EIF2AK4Q9P2K8 1649 aaKnown RBP31.75■■■□□ 2.67
SEC13-217ENST00000482647 ANKRD50Q9ULJ7 1429 aa31.69■■■□□ 2.66
SEC13-217ENST00000482647 FAM135AQ9P2D6 1515 aa31.68■■■□□ 2.66
SEC13-217ENST00000482647 RNF17Q9BXT8 1623 aaKnown RBP31.67■■■□□ 2.66
SEC13-217ENST00000482647 GRWD1Q9BQ67 446 aaKnown RBP eCLIP31.67■■■□□ 2.66
SEC13-217ENST00000482647 KDM5DQ9BY66 1539 aa31.66■■■□□ 2.66
SEC13-217ENST00000482647 CLTCQ00610 1675 aaKnown RBP31.66■■■□□ 2.66
SEC13-217ENST00000482647 MROH2AA6NES4 1674 aa31.64■■■□□ 2.66
SEC13-217ENST00000482647 C3P01024 1663 aa31.62■■■□□ 2.65
SEC13-217ENST00000482647 KANK1Q14678 1352 aa31.62■■■□□ 2.65
SEC13-217ENST00000482647 NPATQ14207 1427 aa31.59■■■□□ 2.65
SEC13-217ENST00000482647 MROH1Q8NDA8 1641 aa31.59■■■□□ 2.65
SEC13-217ENST00000482647 ABCC3O15438 1527 aa31.58■■■□□ 2.65
SEC13-217ENST00000482647 PRDM15P57071 1507 aaPredicted RBP31.56■■■□□ 2.64
SEC13-217ENST00000482647 DEPDC5O75140 1603 aa31.53■■■□□ 2.64
SEC13-217ENST00000482647 FBXO31Q5XUX0 539 aaPredicted RBP31.52■■■□□ 2.64
SEC13-217ENST00000482647 PZPP20742 1482 aa31.52■■■□□ 2.64
SEC13-217ENST00000482647 LMTK3Q96Q04 1460 aa31.52■■■□□ 2.64
SEC13-217ENST00000482647 UHRF1BP1Q6BDS2 1440 aa31.51■■■□□ 2.64
SEC13-217ENST00000482647 SETD1BQ9UPS6 1966 aaKnown RBP31.51■■■□□ 2.63
SEC13-217ENST00000482647 ZC3H13Q5T200 1668 aaKnown RBP31.51■■■□□ 2.63
SEC13-217ENST00000482647 NAIPQ13075 1403 aa31.48■■■□□ 2.63
SEC13-217ENST00000482647 HFM1A2PYH4 1435 aa31.45■■■□□ 2.63
SEC13-217ENST00000482647 HSPA2P54652 639 aa31.45■■■□□ 2.63
SEC13-217ENST00000482647 PREX1Q8TCU6 1659 aa31.44■■■□□ 2.62
SEC13-217ENST00000482647 VWDEQ8N2E2 1590 aa31.44■■■□□ 2.62
SEC13-217ENST00000482647 ARHGAP31Q2M1Z3 1444 aa31.44■■■□□ 2.62
SEC13-217ENST00000482647 LMTK2Q8IWU2 1503 aa31.44■■■□□ 2.62
SEC13-217ENST00000482647 TNRQ92752 1358 aa31.43■■■□□ 2.62
SEC13-217ENST00000482647 NUP155O75694 1391 aa31.42■■■□□ 2.62
SEC13-217ENST00000482647 CEP152O94986 1710 aa31.41■■■□□ 2.62
SEC13-217ENST00000482647 CAMSAP1Q5T5Y3 1602 aa31.4■■■□□ 2.62
SEC13-217ENST00000482647 UNC13BO14795 1591 aa31.38■■■□□ 2.61
SEC13-217ENST00000482647 ERVK-7P63135 1459 aa31.35■■■□□ 2.61
SEC13-217ENST00000482647 SPATA31D1Q6ZQQ2 1576 aa31.32■■■□□ 2.6
SEC13-217ENST00000482647 GCC2Q8IWJ2 1684 aa31.32■■■□□ 2.6
SEC13-217ENST00000482647 EFCAB6Q5THR3 1501 aa31.3■■■□□ 2.6
SEC13-217ENST00000482647 MYO3AQ8NEV4 1616 aa31.3■■■□□ 2.6
SEC13-217ENST00000482647 NLRP1Q9C000 1473 aa31.29■■■□□ 2.6
SEC13-217ENST00000482647 TRIM52Q96A61 297 aa31.29■■■□□ 2.6
SEC13-217ENST00000482647 A2ML1A8K2U0 1454 aa31.28■■■□□ 2.6
SEC13-217ENST00000482647 RPRD2Q5VT52 1461 aaKnown RBP31.27■■■□□ 2.6
SEC13-217ENST00000482647 CEP170BQ9Y4F5 1589 aaPredicted RBP31.26■■■□□ 2.6
SEC13-217ENST00000482647 IQGAP3Q86VI3 1631 aa31.26■■■□□ 2.59
SEC13-217ENST00000482647 TET3O43151 1660 aa31.25■■■□□ 2.59
SEC13-217ENST00000482647 THEMISQ8N1K5 641 aaPredicted RBP31.23■■■□□ 2.59
SEC13-217ENST00000482647 SETD5Q9C0A6 1442 aa31.23■■■□□ 2.59
SEC13-217ENST00000482647 NOS1P29475 1434 aa31.22■■■□□ 2.59
SEC13-217ENST00000482647 ACIN1Q9UKV3 1341 aaKnown RBP31.22■■■□□ 2.59
SEC13-217ENST00000482647 ZNF142P52746 1687 aaPredicted RBP31.21■■■□□ 2.59
SEC13-217ENST00000482647 CFAP65Q6ZU64 1925 aaKnown RBP31.2■■■□□ 2.59
SEC13-217ENST00000482647 SLC52A1Q9NWF4 448 aa31.19■■■□□ 2.58
SEC13-217ENST00000482647 DMRT2Q9Y5R5 561 aa31.18■■■□□ 2.58
SEC13-217ENST00000482647 IDI1Q13907 227 aa31.17■■■□□ 2.58
SEC13-217ENST00000482647 UGGT1Q9NYU2 1555 aa31.15■■■□□ 2.58
SEC13-217ENST00000482647 SLC4A1APQ9BWU0 796 aaKnown RBP31.15■■■□□ 2.58
SEC13-217ENST00000482647 PKD2Q13563 968 aa31.14■■■□□ 2.58
SEC13-217ENST00000482647 STAG3Q9UJ98 1225 aa31.14■■■□□ 2.58
SEC13-217ENST00000482647 PLA2R1Q13018 1463 aa31.14■■■□□ 2.57
SEC13-217ENST00000482647 NCKAP5LQ9HCH0 1330 aa31.11■■■□□ 2.57
SEC13-217ENST00000482647 E9PCH4 1651 aa31.1■■■□□ 2.57
SEC13-217ENST00000482647 SYNMO15061 1565 aa31.1■■■□□ 2.57
SEC13-217ENST00000482647 RAB3GAP2Q9H2M9 1393 aa31.1■■■□□ 2.57
SEC13-217ENST00000482647 ANKLE2Q86XL3 938 aa31.09■■■□□ 2.57
SEC13-217ENST00000482647 HRCP23327 699 aa31.06■■■□□ 2.56
SEC13-217ENST00000482647 MPHOSPH9Q99550 1183 aa31.06■■■□□ 2.56
SEC13-217ENST00000482647 STRCQ7RTU9 1775 aa31.05■■■□□ 2.56
SEC13-217ENST00000482647 PTPRTO14522 1441 aa31.03■■■□□ 2.56
SEC13-217ENST00000482647 PIK3C2BO00750 1634 aa31.01■■■□□ 2.55
SEC13-217ENST00000482647 UBR1Q8IWV7 1749 aa30.99■■■□□ 2.55
SEC13-217ENST00000482647 CHGAP10645 457 aaKnown RBP30.98■■■□□ 2.55
SEC13-217ENST00000482647 EID1Q9Y6B2 187 aa30.98■■■□□ 2.55
SEC13-217ENST00000482647 TMEM2Q9UHN6 1383 aa30.97■■■□□ 2.55
SEC13-217ENST00000482647 TXNDC2Q86VQ3 553 aa30.97■■■□□ 2.55
SEC13-217ENST00000482647 TRIM26Q12899 539 aaPredicted RBP30.96■■■□□ 2.55
SEC13-217ENST00000482647 FOXD1Q16676 465 aa30.95■■■□□ 2.55
SEC13-217ENST00000482647 ADGRB3O60242 1522 aa30.94■■■□□ 2.54
SEC13-217ENST00000482647 ARHGAP23Q9P227 1491 aa30.94■■■□□ 2.54
SEC13-217ENST00000482647 KDM5AP29375 1690 aaKnown RBP30.93■■■□□ 2.54
SEC13-217ENST00000482647 SLIT1O75093 1534 aa30.93■■■□□ 2.54
SEC13-217ENST00000482647 LTKP29376 864 aa30.92■■■□□ 2.54
SEC13-217ENST00000482647 HDGFP51858 240 aaKnown RBP30.91■■■□□ 2.54
SEC13-217ENST00000482647 SPHKAPQ2M3C7 1700 aa30.9■■■□□ 2.54
SEC13-217ENST00000482647 SCAF11Q99590 1463 aaKnown RBP30.89■■■□□ 2.54
SEC13-217ENST00000482647 TRPM2O94759 1503 aa30.89■■■□□ 2.54
SEC13-217ENST00000482647 NPHP4O75161 1426 aaPredicted RBP30.89■■■□□ 2.53
SEC13-217ENST00000482647 MED14O60244 1454 aa30.89■■■□□ 2.53
SEC13-217ENST00000482647 TMEM131LA2VDJ0 1609 aa30.86■■■□□ 2.53
SEC13-217ENST00000482647 NEURL4Q96JN8 1562 aa30.85■■■□□ 2.53
SEC13-217ENST00000482647 POLR1AO95602 1720 aaPredicted RBP30.84■■■□□ 2.53
SEC13-217ENST00000482647 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.83■■■□□ 2.53
SEC13-217ENST00000482647 RIMS2Q9UQ26 1411 aa30.81■■■□□ 2.52
SEC13-217ENST00000482647 PPP1R15AO75807 674 aaPredicted RBP30.81■■■□□ 2.52
SEC13-217ENST00000482647 ZNF326Q5BKZ1 582 aaKnown RBP30.81■■■□□ 2.52
SEC13-217ENST00000482647 CLTCL1P53675 1640 aa30.79■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms