RNA–Protein interactions for RNA: ENST00000482110.5

PBX1-208, Transcript of PBX homeobox 1, humanhuman

TSL 5

Gene PBX1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-208ENST00000482110 RNF17Q9BXT8 1623 aaKnown RBP34.66■■■■□ 3.14
PBX1-208ENST00000482110 ANKRD30AQ9BXX3 1397 aa34.63■■■■□ 3.13
PBX1-208ENST00000482110 KDM5DQ9BY66 1539 aa34.63■■■■□ 3.13
PBX1-208ENST00000482110 NPATQ14207 1427 aa34.62■■■■□ 3.13
PBX1-208ENST00000482110 ERBINQ96RT1 1412 aa34.61■■■■□ 3.13
PBX1-208ENST00000482110 PPARGC1BQ86YN6 1023 aaKnown RBP34.6■■■■□ 3.13
PBX1-208ENST00000482110 ADGRL2O95490 1459 aa34.59■■■■□ 3.13
PBX1-208ENST00000482110 UHRF1BP1Q6BDS2 1440 aa34.58■■■■□ 3.13
PBX1-208ENST00000482110 RRP7BPQ9NSQ0 103 aa34.57■■■■□ 3.12
PBX1-208ENST00000482110 CHIC2Q9UKJ5 165 aa34.56■■■■□ 3.12
PBX1-208ENST00000482110 NCOA1Q15788 1441 aa34.55■■■■□ 3.12
PBX1-208ENST00000482110 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.55■■■■□ 3.12
PBX1-208ENST00000482110 WASHC2CQ9Y4E1 1318 aa34.55■■■■□ 3.12
PBX1-208ENST00000482110 ZC3H13Q5T200 1668 aaKnown RBP34.54■■■■□ 3.12
PBX1-208ENST00000482110 PTPRKQ15262 1439 aa34.51■■■■□ 3.12
PBX1-208ENST00000482110 MROH1Q8NDA8 1641 aa34.5■■■■□ 3.11
PBX1-208ENST00000482110 ABCC3O15438 1527 aa34.47■■■■□ 3.11
PBX1-208ENST00000482110 PZPP20742 1482 aa34.46■■■■□ 3.11
PBX1-208ENST00000482110 PRDM15P57071 1507 aaPredicted RBP34.46■■■■□ 3.11
PBX1-208ENST00000482110 HSPA2P54652 639 aa34.46■■■■□ 3.11
PBX1-208ENST00000482110 DEPDC5O75140 1603 aa34.45■■■■□ 3.11
PBX1-208ENST00000482110 RRBP1Q9P2E9 1410 aaKnown RBP34.43■■■■□ 3.1
PBX1-208ENST00000482110 ROCK1Q13464 1354 aa34.41■■■■□ 3.1
PBX1-208ENST00000482110 MYO3AQ8NEV4 1616 aa34.41■■■■□ 3.1
PBX1-208ENST00000482110 CEP152O94986 1710 aa34.39■■■■□ 3.1
PBX1-208ENST00000482110 ZNF142P52746 1687 aaPredicted RBP34.38■■■■□ 3.09
PBX1-208ENST00000482110 ANKRD50Q9ULJ7 1429 aa34.37■■■■□ 3.09
PBX1-208ENST00000482110 KANK1Q14678 1352 aa34.36■■■■□ 3.09
PBX1-208ENST00000482110 CAMSAP1Q5T5Y3 1602 aa34.36■■■■□ 3.09
PBX1-208ENST00000482110 TNRQ92752 1358 aa34.33■■■■□ 3.09
PBX1-208ENST00000482110 CEP170BQ9Y4F5 1589 aaPredicted RBP34.32■■■■□ 3.09
PBX1-208ENST00000482110 FBXO31Q5XUX0 539 aaPredicted RBP34.3■■■■□ 3.08
PBX1-208ENST00000482110 VWDEQ8N2E2 1590 aa34.3■■■■□ 3.08
PBX1-208ENST00000482110 ITGAEP38570 1179 aa34.29■■■■□ 3.08
PBX1-208ENST00000482110 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.29■■■■□ 3.08
PBX1-208ENST00000482110 LMTK2Q8IWU2 1503 aa34.28■■■■□ 3.08
PBX1-208ENST00000482110 ARHGAP31Q2M1Z3 1444 aa34.28■■■■□ 3.08
PBX1-208ENST00000482110 SPATA31D1Q6ZQQ2 1576 aa34.28■■■■□ 3.08
PBX1-208ENST00000482110 A2ML1A8K2U0 1454 aa34.27■■■■□ 3.08
PBX1-208ENST00000482110 STRCQ7RTU9 1775 aa34.25■■■■□ 3.07
PBX1-208ENST00000482110 ERVK-7P63135 1459 aa34.24■■■■□ 3.07
PBX1-208ENST00000482110 NLRP1Q9C000 1473 aa34.23■■■■□ 3.07
PBX1-208ENST00000482110 DMRT2Q9Y5R5 561 aa34.21■■■■□ 3.07
PBX1-208ENST00000482110 UNC13BO14795 1591 aa34.2■■■■□ 3.07
PBX1-208ENST00000482110 PLA2R1Q13018 1463 aa34.2■■■■□ 3.06
PBX1-208ENST00000482110 EFCAB6Q5THR3 1501 aa34.16■■■■□ 3.06
PBX1-208ENST00000482110 CFAP65Q6ZU64 1925 aaKnown RBP34.16■■■■□ 3.06
PBX1-208ENST00000482110 PTPRTO14522 1441 aa34.12■■■■□ 3.05
PBX1-208ENST00000482110 TET3O43151 1660 aa34.11■■■■□ 3.05
PBX1-208ENST00000482110 UGGT1Q9NYU2 1555 aa34.1■■■■□ 3.05
PBX1-208ENST00000482110 RPRD2Q5VT52 1461 aaKnown RBP34.08■■■■□ 3.05
PBX1-208ENST00000482110 PKD2Q13563 968 aa34.08■■■■□ 3.05
PBX1-208ENST00000482110 GCC2Q8IWJ2 1684 aa34.07■■■■□ 3.04
PBX1-208ENST00000482110 IQGAP3Q86VI3 1631 aa34.07■■■■□ 3.04
PBX1-208ENST00000482110 THEMISQ8N1K5 641 aaPredicted RBP34.05■■■■□ 3.04
PBX1-208ENST00000482110 NAIPQ13075 1403 aa34.03■■■■□ 3.04
PBX1-208ENST00000482110 HFM1A2PYH4 1435 aa34.01■■■■□ 3.03
PBX1-208ENST00000482110 NCKAP5LQ9HCH0 1330 aa34.01■■■■□ 3.03
PBX1-208ENST00000482110 POLR1AO95602 1720 aaPredicted RBP34■■■■□ 3.03
PBX1-208ENST00000482110 NOS1P29475 1434 aa34■■■■□ 3.03
PBX1-208ENST00000482110 NUP155O75694 1391 aa33.99■■■■□ 3.03
PBX1-208ENST00000482110 UBR1Q8IWV7 1749 aa33.99■■■■□ 3.03
PBX1-208ENST00000482110 SYNMO15061 1565 aa33.96■■■■□ 3.03
PBX1-208ENST00000482110 KDM5AP29375 1690 aaKnown RBP33.94■■■■□ 3.02
PBX1-208ENST00000482110 PIK3C2BO00750 1634 aa33.93■■■■□ 3.02
PBX1-208ENST00000482110 E9PCH4 1651 aa33.93■■■■□ 3.02
PBX1-208ENST00000482110 ANKLE2Q86XL3 938 aa33.92■■■■□ 3.02
PBX1-208ENST00000482110 NEURL4Q96JN8 1562 aa33.9■■■■□ 3.02
PBX1-208ENST00000482110 SLC52A1Q9NWF4 448 aa33.9■■■■□ 3.02
PBX1-208ENST00000482110 IDI1Q13907 227 aa33.86■■■■□ 3.01
PBX1-208ENST00000482110 SLIT1O75093 1534 aa33.85■■■■□ 3.01
PBX1-208ENST00000482110 MED14O60244 1454 aa33.85■■■■□ 3.01
PBX1-208ENST00000482110 STAG3Q9UJ98 1225 aa33.84■■■■□ 3.01
PBX1-208ENST00000482110 ADGRB3O60242 1522 aa33.84■■■■□ 3.01
PBX1-208ENST00000482110 ARHGAP23Q9P227 1491 aa33.83■■■■□ 3.01
PBX1-208ENST00000482110 NPHP4O75161 1426 aaPredicted RBP33.8■■■■□ 3
PBX1-208ENST00000482110 IQGAP1P46940 1657 aa33.78■■■■□ 3
PBX1-208ENST00000482110 SCAF11Q99590 1463 aaKnown RBP33.78■■■■□ 3
PBX1-208ENST00000482110 CERKQ8TCT0 537 aa33.78■■■■□ 3
PBX1-208ENST00000482110 TMEM2Q9UHN6 1383 aa33.77■■■■□ 3
PBX1-208ENST00000482110 LTBP4Q8N2S1 1624 aa33.76■■■■□ 3
PBX1-208ENST00000482110 SPHKAPQ2M3C7 1700 aa33.74■■■□□ 2.99
PBX1-208ENST00000482110 EID1Q9Y6B2 187 aa33.74■■■□□ 2.99
PBX1-208ENST00000482110 TRIM52Q96A61 297 aa33.73■■■□□ 2.99
PBX1-208ENST00000482110 TXNDC2Q86VQ3 553 aa33.71■■■□□ 2.99
PBX1-208ENST00000482110 FBXO41Q8TF61 875 aa33.7■■■□□ 2.99
PBX1-208ENST00000482110 TMEM131LA2VDJ0 1609 aa33.7■■■□□ 2.99
PBX1-208ENST00000482110 ZNF335Q9H4Z2 1342 aaPredicted RBP33.7■■■□□ 2.99
PBX1-208ENST00000482110 ACIN1Q9UKV3 1341 aaKnown RBP33.69■■■□□ 2.98
PBX1-208ENST00000482110 LTKP29376 864 aa33.68■■■□□ 2.98
PBX1-208ENST00000482110 ILDR1Q86SU0 546 aaPredicted RBP33.68■■■□□ 2.98
PBX1-208ENST00000482110 MYO5BQ9ULV0 1848 aa33.67■■■□□ 2.98
PBX1-208ENST00000482110 IQSEC2Q5JU85 1478 aa33.66■■■□□ 2.98
PBX1-208ENST00000482110 SETD5Q9C0A6 1442 aa33.63■■■□□ 2.97
PBX1-208ENST00000482110 TRPM2O94759 1503 aa33.63■■■□□ 2.97
PBX1-208ENST00000482110 SLC4A1APQ9BWU0 796 aaKnown RBP33.62■■■□□ 2.97
PBX1-208ENST00000482110 CPS1P31327 1500 aa33.6■■■□□ 2.97
PBX1-208ENST00000482110 HDGFP51858 240 aaKnown RBP33.6■■■□□ 2.97
PBX1-208ENST00000482110 CHGAP10645 457 aaKnown RBP33.59■■■□□ 2.97
PBX1-208ENST00000482110 ZFYVE9O95405 1425 aa33.59■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms