RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 CACNB1Q02641 598 aaPredicted RBP12.48□□□□□ -0.41
LINC00888-203ENST00000482098 DDX27Q96GQ7 796 aaKnown RBP12.48□□□□□ -0.41
LINC00888-203ENST00000482098 KDM4CQ9H3R0 1056 aa12.48□□□□□ -0.41
LINC00888-203ENST00000482098 MAP3K4Q9Y6R4 1608 aa12.47□□□□□ -0.41
LINC00888-203ENST00000482098 PITPNM1O00562 1244 aa12.46□□□□□ -0.41
LINC00888-203ENST00000482098 CCDC61Q9Y6R9 512 aa12.46□□□□□ -0.41
LINC00888-203ENST00000482098 KIF27Q86VH2 1401 aa12.45□□□□□ -0.42
LINC00888-203ENST00000482098 CUL7Q14999 1698 aa12.45□□□□□ -0.42
LINC00888-203ENST00000482098 RBM26Q5T8P6 1007 aaKnown RBP12.44□□□□□ -0.42
LINC00888-203ENST00000482098 CRISPLD2Q9H0B8 497 aa12.43□□□□□ -0.42
LINC00888-203ENST00000482098 FARP1Q9Y4F1 1045 aaPredicted RBP12.42□□□□□ -0.42
LINC00888-203ENST00000482098 CARMIL1Q5VZK9 1371 aa12.42□□□□□ -0.42
LINC00888-203ENST00000482098 MAGI3Q5TCQ9 1506 aa12.42□□□□□ -0.42
LINC00888-203ENST00000482098 TTBK1Q5TCY1 1321 aaPredicted RBP12.41□□□□□ -0.42
LINC00888-203ENST00000482098 PDE4DQ08499 809 aa12.41□□□□□ -0.42
LINC00888-203ENST00000482098 CAMK2BQ13554 666 aa12.41□□□□□ -0.42
LINC00888-203ENST00000482098 TRIM66O15016 1216 aa12.4□□□□□ -0.42
LINC00888-203ENST00000482098 CHADLQ6NUI6 762 aa12.4□□□□□ -0.42
LINC00888-203ENST00000482098 IFNL1Q8IU54 200 aa12.4□□□□□ -0.42
LINC00888-203ENST00000482098 TRIM26Q12899 539 aaPredicted RBP12.39□□□□□ -0.43
LINC00888-203ENST00000482098 LMTK3Q96Q04 1460 aa12.39□□□□□ -0.43
LINC00888-203ENST00000482098 WDR7Q9Y4E6 1490 aa12.39□□□□□ -0.43
LINC00888-203ENST00000482098 CD109Q6YHK3 1445 aa12.38□□□□□ -0.43
LINC00888-203ENST00000482098 DISP1Q96F81 1524 aa12.38□□□□□ -0.43
LINC00888-203ENST00000482098 PAK3O75914 559 aaPredicted RBP12.38□□□□□ -0.43
LINC00888-203ENST00000482098 IQGAP2Q13576 1575 aa12.38□□□□□ -0.43
LINC00888-203ENST00000482098 ARID3AQ99856 593 aa12.37□□□□□ -0.43
LINC00888-203ENST00000482098 MLLT3P42568 568 aaPredicted RBP12.36□□□□□ -0.43
LINC00888-203ENST00000482098 POTEDQ86YR6 584 aa12.36□□□□□ -0.43
LINC00888-203ENST00000482098 PHLDB1Q86UU1 1377 aa12.35□□□□□ -0.43
LINC00888-203ENST00000482098 PTPRMP28827 1452 aa12.34□□□□□ -0.43
LINC00888-203ENST00000482098 ARAP3Q8WWN8 1544 aa12.34□□□□□ -0.43
LINC00888-203ENST00000482098 ZCCHC11Q5TAX3 1644 aaKnown RBP12.33□□□□□ -0.43
LINC00888-203ENST00000482098 UGGT2Q9NYU1 1516 aa12.33□□□□□ -0.44
LINC00888-203ENST00000482098 SOCS7O14512 581 aa12.33□□□□□ -0.44
LINC00888-203ENST00000482098 CFAP43Q8NDM7 1665 aa12.3□□□□□ -0.44
LINC00888-203ENST00000482098 ZNF316A6NFI3 1004 aaPredicted RBP12.3□□□□□ -0.44
LINC00888-203ENST00000482098 MAP3K13O43283 966 aa12.3□□□□□ -0.44
LINC00888-203ENST00000482098 MKRN3Q13064 507 aaKnown RBP12.3□□□□□ -0.44
LINC00888-203ENST00000482098 PCF11O94913 1555 aaKnown RBP12.3□□□□□ -0.44
LINC00888-203ENST00000482098 FLIIQ13045 1269 aa12.29□□□□□ -0.44
LINC00888-203ENST00000482098 MS4A4AQ96JQ5 239 aa12.29□□□□□ -0.44
LINC00888-203ENST00000482098 ADAMTSL3P82987 1691 aa12.29□□□□□ -0.44
LINC00888-203ENST00000482098 SPDYE16A6NNV3 312 aaPredicted RBP12.28□□□□□ -0.44
LINC00888-203ENST00000482098 GOLGA2Q08379 1002 aa12.28□□□□□ -0.44
LINC00888-203ENST00000482098 DDRGK1Q96HY6 314 aa12.28□□□□□ -0.44
LINC00888-203ENST00000482098 KIF12Q96FN5 646 aa12.27□□□□□ -0.45
LINC00888-203ENST00000482098 KCNH8Q96L42 1107 aa12.27□□□□□ -0.45
LINC00888-203ENST00000482098 FAM117AQ9C073 453 aa12.27□□□□□ -0.45
LINC00888-203ENST00000482098 KIF21BO75037 1637 aa12.26□□□□□ -0.45
LINC00888-203ENST00000482098 HRCP23327 699 aa12.26□□□□□ -0.45
LINC00888-203ENST00000482098 NPM2Q86SE8 214 aaKnown RBP12.26□□□□□ -0.45
LINC00888-203ENST00000482098 CERKQ8TCT0 537 aa12.26□□□□□ -0.45
LINC00888-203ENST00000482098 KIAA0556O60303 1618 aa12.26□□□□□ -0.45
LINC00888-203ENST00000482098 PPP1R15BQ5SWA1 713 aa12.25□□□□□ -0.45
LINC00888-203ENST00000482098 APBB1O00213 710 aa12.24□□□□□ -0.45
LINC00888-203ENST00000482098 C1orf115Q9H7X2 142 aa12.24□□□□□ -0.45
LINC00888-203ENST00000482098 RAPGEF2Q9Y4G8 1499 aa12.23□□□□□ -0.45
LINC00888-203ENST00000482098 GOLGA3Q08378 1498 aa12.22□□□□□ -0.45
LINC00888-203ENST00000482098 MINK1Q8N4C8 1332 aaPredicted RBP12.22□□□□□ -0.45
LINC00888-203ENST00000482098 ILDR2Q71H61 639 aa12.22□□□□□ -0.45
LINC00888-203ENST00000482098 DISP3Q9P2K9 1392 aa12.21□□□□□ -0.45
LINC00888-203ENST00000482098 DPYSL4O14531 572 aa12.21□□□□□ -0.45
LINC00888-203ENST00000482098 ABCA8O94911 1581 aa12.21□□□□□ -0.46
LINC00888-203ENST00000482098 PDIA6Q15084 440 aa12.2□□□□□ -0.46
LINC00888-203ENST00000482098 FAM9AQ8IZU1 332 aaPredicted RBP12.2□□□□□ -0.46
LINC00888-203ENST00000482098 GPHNQ9NQX3 736 aaPredicted RBP12.2□□□□□ -0.46
LINC00888-203ENST00000482098 NEO1Q92859 1461 aa12.2□□□□□ -0.46
LINC00888-203ENST00000482098 ARID3CA6NKF2 412 aa12.19□□□□□ -0.46
LINC00888-203ENST00000482098 RAPGEF3O95398 923 aa12.19□□□□□ -0.46
LINC00888-203ENST00000482098 PDIA4P13667 645 aaKnown RBP12.19□□□□□ -0.46
LINC00888-203ENST00000482098 PRKAR2AP13861 404 aaKnown RBP12.19□□□□□ -0.46
LINC00888-203ENST00000482098 ARID4BQ4LE39 1312 aaPredicted RBP12.18□□□□□ -0.46
LINC00888-203ENST00000482098 BCORL1Q5H9F3 1711 aa12.18□□□□□ -0.46
LINC00888-203ENST00000482098 ZBTB7CA1YPR0 619 aa12.17□□□□□ -0.46
LINC00888-203ENST00000482098 PLEKHG3A1L390 1219 aa12.16□□□□□ -0.46
LINC00888-203ENST00000482098 MAP2K5Q13163 448 aa12.16□□□□□ -0.46
LINC00888-203ENST00000482098 MADDQ8WXG6 1647 aa12.15□□□□□ -0.46
LINC00888-203ENST00000482098 GPR37O15354 613 aa12.15□□□□□ -0.46
LINC00888-203ENST00000482098 HSPA2P54652 639 aa12.15□□□□□ -0.46
LINC00888-203ENST00000482098 POGZQ7Z3K3 1410 aa12.14□□□□□ -0.47
LINC00888-203ENST00000482098 AMHR2Q16671 573 aa12.14□□□□□ -0.47
LINC00888-203ENST00000482098 CCDC102AQ96A19 550 aa12.14□□□□□ -0.47
LINC00888-203ENST00000482098 ABCA9Q8IUA7 1624 aa12.14□□□□□ -0.47
LINC00888-203ENST00000482098 NUTM2FA1L443 756 aa12.13□□□□□ -0.47
LINC00888-203ENST00000482098 GOPCQ9HD26 462 aa12.13□□□□□ -0.47
LINC00888-203ENST00000482098 EMILIN3Q9NT22 766 aa12.13□□□□□ -0.47
LINC00888-203ENST00000482098 ATP10BO94823 1461 aa12.13□□□□□ -0.47
LINC00888-203ENST00000482098 IRF6O14896 467 aa12.12□□□□□ -0.47
LINC00888-203ENST00000482098 PARP9Q8IXQ6 854 aa12.11□□□□□ -0.47
LINC00888-203ENST00000482098 TMEM106CQ9BVX2 250 aa12.11□□□□□ -0.47
LINC00888-203ENST00000482098 A6NJR5 290 aa12.1□□□□□ -0.47
LINC00888-203ENST00000482098 CCDC9Q9Y3X0 531 aaKnown RBP12.1□□□□□ -0.47
LINC00888-203ENST00000482098 FHOD3Q2V2M9 1422 aa12.1□□□□□ -0.47
LINC00888-203ENST00000482098 ARHGEF40Q8TER5 1519 aa12.09□□□□□ -0.47
LINC00888-203ENST00000482098 AKNAQ7Z591 1439 aa12.09□□□□□ -0.47
LINC00888-203ENST00000482098 YEATS2Q9ULM3 1422 aa12.09□□□□□ -0.47
LINC00888-203ENST00000482098 FRMPD1Q5SYB0 1578 aa12.09□□□□□ -0.47
LINC00888-203ENST00000482098 FANCAO15360 1455 aa12.08□□□□□ -0.47
LINC00888-203ENST00000482098 DENND4BO75064 1496 aaPredicted RBP12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms