RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 MAP3K1Q13233 1512 aa18.41■□□□□ 0.54
GARNL3-217ENST00000481875 VPS8Q8N3P4 1428 aa18.39■□□□□ 0.53
GARNL3-217ENST00000481875 A2ML1A8K2U0 1454 aa18.38■□□□□ 0.53
GARNL3-217ENST00000481875 LRRC9Q6ZRR7 1453 aa18.38■□□□□ 0.53
GARNL3-217ENST00000481875 PZPP20742 1482 aa18.36■□□□□ 0.53
GARNL3-217ENST00000481875 DNMT1P26358 1616 aaKnown RBP18.36■□□□□ 0.53
GARNL3-217ENST00000481875 KDM5DQ9BY66 1539 aa18.36■□□□□ 0.53
GARNL3-217ENST00000481875 NCKAP5LQ9HCH0 1330 aa18.35■□□□□ 0.53
GARNL3-217ENST00000481875 KIF3BO15066 747 aa18.35■□□□□ 0.53
GARNL3-217ENST00000481875 MAST1Q9Y2H9 1570 aa18.34■□□□□ 0.53
GARNL3-217ENST00000481875 TSPY4P0CV99 314 aa18.34■□□□□ 0.53
GARNL3-217ENST00000481875 TSPY10P0CW01 314 aa18.34■□□□□ 0.53
GARNL3-217ENST00000481875 MIA2Q96PC5 1412 aa18.32■□□□□ 0.52
GARNL3-217ENST00000481875 RNF17Q9BXT8 1623 aaKnown RBP18.31■□□□□ 0.52
GARNL3-217ENST00000481875 TNRQ92752 1358 aa18.3■□□□□ 0.52
GARNL3-217ENST00000481875 WASHC2CQ9Y4E1 1318 aa18.3■□□□□ 0.52
GARNL3-217ENST00000481875 NLRP1Q9C000 1473 aa18.29■□□□□ 0.52
GARNL3-217ENST00000481875 PIAS4Q8N2W9 510 aaPredicted RBP18.29■□□□□ 0.52
GARNL3-217ENST00000481875 EIF2AK4Q9P2K8 1649 aaKnown RBP18.29■□□□□ 0.52
GARNL3-217ENST00000481875 POLR1AO95602 1720 aaPredicted RBP18.29■□□□□ 0.52
GARNL3-217ENST00000481875 ZNF335Q9H4Z2 1342 aaPredicted RBP18.28■□□□□ 0.52
GARNL3-217ENST00000481875 FBXO31Q5XUX0 539 aaPredicted RBP18.28■□□□□ 0.52
GARNL3-217ENST00000481875 ZC3H13Q5T200 1668 aaKnown RBP18.28■□□□□ 0.52
GARNL3-217ENST00000481875 MYOM3Q5VTT5 1437 aa18.27■□□□□ 0.52
GARNL3-217ENST00000481875 LOC105371045A0A1W2PR82 267 aa18.27■□□□□ 0.52
GARNL3-217ENST00000481875 NEURL4Q96JN8 1562 aa18.25■□□□□ 0.51
GARNL3-217ENST00000481875 KANK4Q5T7N3 995 aaPredicted RBP18.25■□□□□ 0.51
GARNL3-217ENST00000481875 THEMISQ8N1K5 641 aaPredicted RBP18.25■□□□□ 0.51
GARNL3-217ENST00000481875 DEPDC5O75140 1603 aa18.24■□□□□ 0.51
GARNL3-217ENST00000481875 MED14O60244 1454 aa18.24■□□□□ 0.51
GARNL3-217ENST00000481875 SPATA31D1Q6ZQQ2 1576 aa18.23■□□□□ 0.51
GARNL3-217ENST00000481875 ABCC3O15438 1527 aa18.23■□□□□ 0.51
GARNL3-217ENST00000481875 ANKLE2Q86XL3 938 aa18.22■□□□□ 0.51
GARNL3-217ENST00000481875 UGGT1Q9NYU2 1555 aa18.21■□□□□ 0.51
GARNL3-217ENST00000481875 MROH1Q8NDA8 1641 aa18.21■□□□□ 0.51
GARNL3-217ENST00000481875 CPS1P31327 1500 aa18.21■□□□□ 0.51
GARNL3-217ENST00000481875 DUOX2Q9NRD8 1548 aa18.21■□□□□ 0.51
GARNL3-217ENST00000481875 SHANK2Q9UPX8 1470 aa18.19■□□□□ 0.5
GARNL3-217ENST00000481875 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.18■□□□□ 0.5
GARNL3-217ENST00000481875 DISP3Q9P2K9 1392 aa18.18■□□□□ 0.5
GARNL3-217ENST00000481875 UBAP1LF5GYI3 381 aa18.17■□□□□ 0.5
GARNL3-217ENST00000481875 ARHGAP31Q2M1Z3 1444 aa18.16■□□□□ 0.5
GARNL3-217ENST00000481875 ERVK-7P63135 1459 aa18.16■□□□□ 0.5
GARNL3-217ENST00000481875 VWDEQ8N2E2 1590 aa18.16■□□□□ 0.5
GARNL3-217ENST00000481875 CROCC2H7BZ55 1655 aa18.15■□□□□ 0.5
GARNL3-217ENST00000481875 ERBINQ96RT1 1412 aa18.15■□□□□ 0.5
GARNL3-217ENST00000481875 ABCC5O15440 1437 aa18.15■□□□□ 0.5
GARNL3-217ENST00000481875 PRDM15P57071 1507 aaPredicted RBP18.14■□□□□ 0.49
GARNL3-217ENST00000481875 CFAP65Q6ZU64 1925 aaKnown RBP18.14■□□□□ 0.49
GARNL3-217ENST00000481875 NPHP4O75161 1426 aaPredicted RBP18.14■□□□□ 0.49
GARNL3-217ENST00000481875 PTPN23Q9H3S7 1636 aa18.13■□□□□ 0.49
GARNL3-217ENST00000481875 IQGAP1P46940 1657 aa18.13■□□□□ 0.49
GARNL3-217ENST00000481875 CEP152O94986 1710 aa18.13■□□□□ 0.49
GARNL3-217ENST00000481875 ILDR2Q71H61 639 aa18.12■□□□□ 0.49
GARNL3-217ENST00000481875 KIF15Q9NS87 1388 aa18.12■□□□□ 0.49
GARNL3-217ENST00000481875 UBR1Q8IWV7 1749 aa18.12■□□□□ 0.49
GARNL3-217ENST00000481875 TOM1O60784 492 aa18.1■□□□□ 0.49
GARNL3-217ENST00000481875 DAPK1P53355 1430 aa18.09■□□□□ 0.49
GARNL3-217ENST00000481875 FGD6Q6ZV73 1430 aa18.09■□□□□ 0.49
GARNL3-217ENST00000481875 SOCS7O14512 581 aa18.09■□□□□ 0.49
GARNL3-217ENST00000481875 APLP2Q06481 763 aa18.09■□□□□ 0.49
GARNL3-217ENST00000481875 SLIT1O75093 1534 aa18.08■□□□□ 0.49
GARNL3-217ENST00000481875 ARHGAP23Q9P227 1491 aa18.08■□□□□ 0.49
GARNL3-217ENST00000481875 KDM5AP29375 1690 aaKnown RBP18.08■□□□□ 0.48
GARNL3-217ENST00000481875 LMTK2Q8IWU2 1503 aa18.06■□□□□ 0.48
GARNL3-217ENST00000481875 STRCP1A6NGW2 1772 aa18.06■□□□□ 0.48
GARNL3-217ENST00000481875 RRP7BPQ9NSQ0 103 aa18.05■□□□□ 0.48
GARNL3-217ENST00000481875 SCAF11Q99590 1463 aaKnown RBP18.04■□□□□ 0.48
GARNL3-217ENST00000481875 ALKQ9UM73 1620 aa18.04■□□□□ 0.48
GARNL3-217ENST00000481875 SYNMO15061 1565 aa18.04■□□□□ 0.48
GARNL3-217ENST00000481875 ANKRD30AQ9BXX3 1397 aa18.04■□□□□ 0.48
GARNL3-217ENST00000481875 KANK1Q14678 1352 aa18.03■□□□□ 0.48
GARNL3-217ENST00000481875 LRRC7Q96NW7 1537 aa18.03■□□□□ 0.48
GARNL3-217ENST00000481875 ADGRL2O95490 1459 aa18.01■□□□□ 0.47
GARNL3-217ENST00000481875 LTKP29376 864 aa18■□□□□ 0.47
GARNL3-217ENST00000481875 HSPA1LP34931 641 aa18■□□□□ 0.47
GARNL3-217ENST00000481875 PIK3C2BO00750 1634 aa17.98■□□□□ 0.47
GARNL3-217ENST00000481875 TXNDC2Q86VQ3 553 aa17.98■□□□□ 0.47
GARNL3-217ENST00000481875 TMEM2Q9UHN6 1383 aa17.98■□□□□ 0.47
GARNL3-217ENST00000481875 NOS1P29475 1434 aa17.98■□□□□ 0.47
GARNL3-217ENST00000481875 EID1Q9Y6B2 187 aa17.97■□□□□ 0.47
GARNL3-217ENST00000481875 PIP4K2BP78356 416 aa17.96■□□□□ 0.47
GARNL3-217ENST00000481875 EFCAB6Q5THR3 1501 aa17.95■□□□□ 0.46
GARNL3-217ENST00000481875 KCNA4P22459 653 aa17.95■□□□□ 0.46
GARNL3-217ENST00000481875 IDI1Q13907 227 aa17.95■□□□□ 0.46
GARNL3-217ENST00000481875 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.95■□□□□ 0.46
GARNL3-217ENST00000481875 RPRD2Q5VT52 1461 aaKnown RBP17.95■□□□□ 0.46
GARNL3-217ENST00000481875 XIRP1Q702N8 1843 aaKnown RBP17.94■□□□□ 0.46
GARNL3-217ENST00000481875 SLC52A1Q9NWF4 448 aa17.94■□□□□ 0.46
GARNL3-217ENST00000481875 CHIC2Q9UKJ5 165 aa17.93■□□□□ 0.46
GARNL3-217ENST00000481875 TET3O43151 1660 aa17.93■□□□□ 0.46
GARNL3-217ENST00000481875 SCAF1Q9H7N4 1312 aaKnown RBP17.92■□□□□ 0.46
GARNL3-217ENST00000481875 MED1Q15648 1581 aaPredicted RBP17.91■□□□□ 0.46
GARNL3-217ENST00000481875 ANKRD50Q9ULJ7 1429 aa17.9■□□□□ 0.46
GARNL3-217ENST00000481875 STAG3Q9UJ98 1225 aa17.88■□□□□ 0.45
GARNL3-217ENST00000481875 ADGRB3O60242 1522 aa17.88■□□□□ 0.45
GARNL3-217ENST00000481875 KCNA6P17658 529 aa17.87■□□□□ 0.45
GARNL3-217ENST00000481875 ROCK1Q13464 1354 aa17.85■□□□□ 0.45
GARNL3-217ENST00000481875 FAM135BQ49AJ0 1406 aa17.85■□□□□ 0.45
GARNL3-217ENST00000481875 GCC2Q8IWJ2 1684 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms