RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 PCGF6Q9BYE7 350 aa30.98■■■□□ 2.55
VPS16-207ENST00000481812 PPP6R1Q9UPN7 881 aa30.98■■■□□ 2.55
VPS16-207ENST00000481812 UNC13BO14795 1591 aa30.97■■■□□ 2.55
VPS16-207ENST00000481812 MROH1Q8NDA8 1641 aa30.95■■■□□ 2.55
VPS16-207ENST00000481812 RAB3GAP2Q9H2M9 1393 aa30.95■■■□□ 2.55
VPS16-207ENST00000481812 FAM135AQ9P2D6 1515 aa30.95■■■□□ 2.55
VPS16-207ENST00000481812 PRDM15P57071 1507 aaPredicted RBP30.94■■■□□ 2.54
VPS16-207ENST00000481812 GGT6Q6P531 493 aa30.92■■■□□ 2.54
VPS16-207ENST00000481812 KDM5DQ9BY66 1539 aa30.89■■■□□ 2.54
VPS16-207ENST00000481812 VWDEQ8N2E2 1590 aa30.89■■■□□ 2.54
VPS16-207ENST00000481812 KANK1Q14678 1352 aa30.88■■■□□ 2.53
VPS16-207ENST00000481812 ADAMTSL3P82987 1691 aa30.87■■■□□ 2.53
VPS16-207ENST00000481812 MLECQ14165 292 aa30.86■■■□□ 2.53
VPS16-207ENST00000481812 ZC3H13Q5T200 1668 aaKnown RBP30.86■■■□□ 2.53
VPS16-207ENST00000481812 IQGAP3Q86VI3 1631 aa30.84■■■□□ 2.53
VPS16-207ENST00000481812 NUP155O75694 1391 aa30.82■■■□□ 2.52
VPS16-207ENST00000481812 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.82■■■□□ 2.52
VPS16-207ENST00000481812 LMTK2Q8IWU2 1503 aa30.82■■■□□ 2.52
VPS16-207ENST00000481812 FER1L4A9Z1Z3 1794 aa30.82■■■□□ 2.52
VPS16-207ENST00000481812 CNTLNQ9NXG0 1405 aa30.81■■■□□ 2.52
VPS16-207ENST00000481812 ABCC3O15438 1527 aa30.8■■■□□ 2.52
VPS16-207ENST00000481812 WASHC2CQ9Y4E1 1318 aa30.79■■■□□ 2.52
VPS16-207ENST00000481812 CEP152O94986 1710 aa30.78■■■□□ 2.52
VPS16-207ENST00000481812 TRIM52Q96A61 297 aa30.78■■■□□ 2.52
VPS16-207ENST00000481812 MROH2AA6NES4 1674 aa30.78■■■□□ 2.52
VPS16-207ENST00000481812 ESF1Q9H501 851 aaKnown RBP30.77■■■□□ 2.52
VPS16-207ENST00000481812 CLTCQ00610 1675 aaKnown RBP30.77■■■□□ 2.52
VPS16-207ENST00000481812 MADDQ8WXG6 1647 aa30.76■■■□□ 2.52
VPS16-207ENST00000481812 TET3O43151 1660 aa30.75■■■□□ 2.51
VPS16-207ENST00000481812 PZPP20742 1482 aa30.73■■■□□ 2.51
VPS16-207ENST00000481812 CAMSAP1Q5T5Y3 1602 aa30.72■■■□□ 2.51
VPS16-207ENST00000481812 ARHGAP31Q2M1Z3 1444 aa30.71■■■□□ 2.51
VPS16-207ENST00000481812 RIMS1Q86UR5 1692 aaKnown RBP30.69■■■□□ 2.5
VPS16-207ENST00000481812 EFCAB6Q5THR3 1501 aa30.68■■■□□ 2.5
VPS16-207ENST00000481812 ZMYM3Q14202 1370 aa30.66■■■□□ 2.5
VPS16-207ENST00000481812 MPHOSPH9Q99550 1183 aa30.66■■■□□ 2.5
VPS16-207ENST00000481812 SLC4A1APQ9BWU0 796 aaKnown RBP30.66■■■□□ 2.5
VPS16-207ENST00000481812 RPRD2Q5VT52 1461 aaKnown RBP30.65■■■□□ 2.5
VPS16-207ENST00000481812 KDM4FA0A1W2PPD8 638 aa30.64■■■□□ 2.5
VPS16-207ENST00000481812 E9PCH4 1651 aa30.63■■■□□ 2.49
VPS16-207ENST00000481812 C3P01024 1663 aa30.62■■■□□ 2.49
VPS16-207ENST00000481812 NPATQ14207 1427 aa30.6■■■□□ 2.49
VPS16-207ENST00000481812 PTPRMP28827 1452 aa30.58■■■□□ 2.49
VPS16-207ENST00000481812 PKD2Q13563 968 aa30.58■■■□□ 2.49
VPS16-207ENST00000481812 CFAP65Q6ZU64 1925 aaKnown RBP30.55■■■□□ 2.48
VPS16-207ENST00000481812 PREX1Q8TCU6 1659 aa30.54■■■□□ 2.48
VPS16-207ENST00000481812 SPATA31D1Q6ZQQ2 1576 aa30.52■■■□□ 2.48
VPS16-207ENST00000481812 DHX57Q6P158 1386 aaKnown RBP30.52■■■□□ 2.48
VPS16-207ENST00000481812 NOS1P29475 1434 aa30.51■■■□□ 2.47
VPS16-207ENST00000481812 ERVK-7P63135 1459 aa30.5■■■□□ 2.47
VPS16-207ENST00000481812 SETD1BQ9UPS6 1966 aaKnown RBP30.5■■■□□ 2.47
VPS16-207ENST00000481812 PTPRTO14522 1441 aa30.5■■■□□ 2.47
VPS16-207ENST00000481812 SPHKAPQ2M3C7 1700 aa30.5■■■□□ 2.47
VPS16-207ENST00000481812 CEBPAP49715 358 aaPredicted RBP30.49■■■□□ 2.47
VPS16-207ENST00000481812 FBXO31Q5XUX0 539 aaPredicted RBP30.46■■■□□ 2.47
VPS16-207ENST00000481812 TRPM2O94759 1503 aa30.42■■■□□ 2.46
VPS16-207ENST00000481812 FOXD1Q16676 465 aa30.42■■■□□ 2.46
VPS16-207ENST00000481812 PLA2R1Q13018 1463 aa30.42■■■□□ 2.46
VPS16-207ENST00000481812 TNRQ92752 1358 aa30.41■■■□□ 2.46
VPS16-207ENST00000481812 SYNMO15061 1565 aa30.41■■■□□ 2.46
VPS16-207ENST00000481812 ANKRD30BQ9BXX2 1392 aa30.41■■■□□ 2.46
VPS16-207ENST00000481812 SLC52A1Q9NWF4 448 aa30.38■■■□□ 2.45
VPS16-207ENST00000481812 PIK3C2BO00750 1634 aa30.37■■■□□ 2.45
VPS16-207ENST00000481812 PLPPR3Q6T4P5 718 aa30.35■■■□□ 2.45
VPS16-207ENST00000481812 NLRP1Q9C000 1473 aa30.35■■■□□ 2.45
VPS16-207ENST00000481812 CLSPNQ9HAW4 1339 aa30.33■■■□□ 2.45
VPS16-207ENST00000481812 MYO3AQ8NEV4 1616 aa30.31■■■□□ 2.44
VPS16-207ENST00000481812 CCDC144AA2RUR9 1427 aa30.3■■■□□ 2.44
VPS16-207ENST00000481812 CLTCL1P53675 1640 aa30.3■■■□□ 2.44
VPS16-207ENST00000481812 IDI1Q13907 227 aa30.29■■■□□ 2.44
VPS16-207ENST00000481812 KDM5AP29375 1690 aaKnown RBP30.29■■■□□ 2.44
VPS16-207ENST00000481812 ZNF142P52746 1687 aaPredicted RBP30.27■■■□□ 2.44
VPS16-207ENST00000481812 UGGT1Q9NYU2 1555 aa30.27■■■□□ 2.44
VPS16-207ENST00000481812 KIF1BO60333 1816 aa30.26■■■□□ 2.44
VPS16-207ENST00000481812 A2ML1A8K2U0 1454 aa30.25■■■□□ 2.43
VPS16-207ENST00000481812 UHRF1BP1Q6BDS2 1440 aa30.25■■■□□ 2.43
VPS16-207ENST00000481812 CCER1Q8TC90 406 aaPredicted RBP30.24■■■□□ 2.43
VPS16-207ENST00000481812 NEURL4Q96JN8 1562 aa30.23■■■□□ 2.43
VPS16-207ENST00000481812 CEP170BQ9Y4F5 1589 aaPredicted RBP30.23■■■□□ 2.43
VPS16-207ENST00000481812 UBR1Q8IWV7 1749 aa30.2■■■□□ 2.43
VPS16-207ENST00000481812 TMEM131LA2VDJ0 1609 aa30.2■■■□□ 2.43
VPS16-207ENST00000481812 ADGRB3O60242 1522 aa30.2■■■□□ 2.42
VPS16-207ENST00000481812 MYO5BQ9ULV0 1848 aa30.15■■■□□ 2.42
VPS16-207ENST00000481812 SPATA31E1Q6ZUB1 1445 aa30.14■■■□□ 2.42
VPS16-207ENST00000481812 THEMISQ8N1K5 641 aaPredicted RBP30.13■■■□□ 2.41
VPS16-207ENST00000481812 STAG3Q9UJ98 1225 aa30.13■■■□□ 2.41
VPS16-207ENST00000481812 SIN3AQ96ST3 1273 aa30.12■■■□□ 2.41
VPS16-207ENST00000481812 CHGAP10645 457 aaKnown RBP30.1■■■□□ 2.41
VPS16-207ENST00000481812 LMTK3Q96Q04 1460 aa30.1■■■□□ 2.41
VPS16-207ENST00000481812 SLIT1O75093 1534 aa30.06■■■□□ 2.4
VPS16-207ENST00000481812 RPGRIP1LQ68CZ1 1315 aa30.06■■■□□ 2.4
VPS16-207ENST00000481812 NEUROD1Q13562 356 aa30.05■■■□□ 2.4
VPS16-207ENST00000481812 ARHGAP23Q9P227 1491 aa30.05■■■□□ 2.4
VPS16-207ENST00000481812 AEBP2Q6ZN18 517 aaPredicted RBP30.04■■■□□ 2.4
VPS16-207ENST00000481812 TMEM2Q9UHN6 1383 aa30.03■■■□□ 2.4
VPS16-207ENST00000481812 HDGFP51858 240 aaKnown RBP30.01■■■□□ 2.39
VPS16-207ENST00000481812 ZNF326Q5BKZ1 582 aaKnown RBP30.01■■■□□ 2.39
VPS16-207ENST00000481812 STAC3Q96MF2 364 aa30.01■■■□□ 2.39
VPS16-207ENST00000481812 IFT172Q9UG01 1749 aa30.01■■■□□ 2.39
VPS16-207ENST00000481812 ZFYVE9O95405 1425 aa30■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms