RNA–Protein interactions for RNA: ENST00000481710.5

SMIM11A-205, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best)

Gene SMIM11A, Length 1,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-205ENST00000481710 KIF3BO15066 747 aa26.89■■□□□ 1.9
SMIM11A-205ENST00000481710 ITGAEP38570 1179 aa26.89■■□□□ 1.9
SMIM11A-205ENST00000481710 DEPDC5O75140 1603 aa26.89■■□□□ 1.9
SMIM11A-205ENST00000481710 GGT6Q6P531 493 aa26.87■■□□□ 1.89
SMIM11A-205ENST00000481710 CEP152O94986 1710 aa26.87■■□□□ 1.89
SMIM11A-205ENST00000481710 ZC3H13Q5T200 1668 aaKnown RBP26.85■■□□□ 1.89
SMIM11A-205ENST00000481710 KDM5DQ9BY66 1539 aa26.85■■□□□ 1.89
SMIM11A-205ENST00000481710 ROCK1Q13464 1354 aa26.84■■□□□ 1.89
SMIM11A-205ENST00000481710 CNTLNQ9NXG0 1405 aa26.84■■□□□ 1.89
SMIM11A-205ENST00000481710 PRDM15P57071 1507 aaPredicted RBP26.84■■□□□ 1.89
SMIM11A-205ENST00000481710 FAM135AQ9P2D6 1515 aa26.84■■□□□ 1.89
SMIM11A-205ENST00000481710 GCC2Q8IWJ2 1684 aa26.82■■□□□ 1.88
SMIM11A-205ENST00000481710 PLPPR3Q6T4P5 718 aa26.79■■□□□ 1.88
SMIM11A-205ENST00000481710 ESF1Q9H501 851 aaKnown RBP26.79■■□□□ 1.88
SMIM11A-205ENST00000481710 ANKRD50Q9ULJ7 1429 aa26.78■■□□□ 1.88
SMIM11A-205ENST00000481710 ABCC3O15438 1527 aa26.78■■□□□ 1.88
SMIM11A-205ENST00000481710 CAMSAP1Q5T5Y3 1602 aa26.77■■□□□ 1.88
SMIM11A-205ENST00000481710 CEBPAP49715 358 aaPredicted RBP26.76■■□□□ 1.87
SMIM11A-205ENST00000481710 UNC13BO14795 1591 aa26.75■■□□□ 1.87
SMIM11A-205ENST00000481710 PPP6R1Q9UPN7 881 aa26.75■■□□□ 1.87
SMIM11A-205ENST00000481710 PREX1Q8TCU6 1659 aa26.75■■□□□ 1.87
SMIM11A-205ENST00000481710 VWDEQ8N2E2 1590 aa26.73■■□□□ 1.87
SMIM11A-205ENST00000481710 ZMYM3Q14202 1370 aa26.71■■□□□ 1.87
SMIM11A-205ENST00000481710 WASHC2CQ9Y4E1 1318 aa26.69■■□□□ 1.86
SMIM11A-205ENST00000481710 NAIPQ13075 1403 aa26.68■■□□□ 1.86
SMIM11A-205ENST00000481710 SETD1BQ9UPS6 1966 aaKnown RBP26.67■■□□□ 1.86
SMIM11A-205ENST00000481710 CFAP65Q6ZU64 1925 aaKnown RBP26.67■■□□□ 1.86
SMIM11A-205ENST00000481710 PZPP20742 1482 aa26.66■■□□□ 1.86
SMIM11A-205ENST00000481710 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.65■■□□□ 1.86
SMIM11A-205ENST00000481710 MYO3AQ8NEV4 1616 aa26.65■■□□□ 1.86
SMIM11A-205ENST00000481710 HFM1A2PYH4 1435 aa26.65■■□□□ 1.86
SMIM11A-205ENST00000481710 LMTK3Q96Q04 1460 aa26.64■■□□□ 1.86
SMIM11A-205ENST00000481710 IQGAP3Q86VI3 1631 aa26.64■■□□□ 1.85
SMIM11A-205ENST00000481710 LMTK2Q8IWU2 1503 aa26.64■■□□□ 1.85
SMIM11A-205ENST00000481710 NPATQ14207 1427 aa26.64■■□□□ 1.85
SMIM11A-205ENST00000481710 KANK1Q14678 1352 aa26.62■■□□□ 1.85
SMIM11A-205ENST00000481710 TET3O43151 1660 aa26.62■■□□□ 1.85
SMIM11A-205ENST00000481710 EFCAB6Q5THR3 1501 aa26.61■■□□□ 1.85
SMIM11A-205ENST00000481710 ZNF142P52746 1687 aaPredicted RBP26.6■■□□□ 1.85
SMIM11A-205ENST00000481710 SPATA31D1Q6ZQQ2 1576 aa26.58■■□□□ 1.85
SMIM11A-205ENST00000481710 UHRF1BP1Q6BDS2 1440 aa26.56■■□□□ 1.84
SMIM11A-205ENST00000481710 ARHGAP31Q2M1Z3 1444 aa26.55■■□□□ 1.84
SMIM11A-205ENST00000481710 ERVK-7P63135 1459 aa26.55■■□□□ 1.84
SMIM11A-205ENST00000481710 E9PCH4 1651 aa26.54■■□□□ 1.84
SMIM11A-205ENST00000481710 FBXO31Q5XUX0 539 aaPredicted RBP26.54■■□□□ 1.84
SMIM11A-205ENST00000481710 CEP170BQ9Y4F5 1589 aaPredicted RBP26.52■■□□□ 1.84
SMIM11A-205ENST00000481710 TNRQ92752 1358 aa26.5■■□□□ 1.83
SMIM11A-205ENST00000481710 NUP155O75694 1391 aa26.48■■□□□ 1.83
SMIM11A-205ENST00000481710 SYNMO15061 1565 aa26.47■■□□□ 1.83
SMIM11A-205ENST00000481710 RPRD2Q5VT52 1461 aaKnown RBP26.45■■□□□ 1.82
SMIM11A-205ENST00000481710 HSPA2P54652 639 aa26.44■■□□□ 1.82
SMIM11A-205ENST00000481710 A2ML1A8K2U0 1454 aa26.43■■□□□ 1.82
SMIM11A-205ENST00000481710 NLRP1Q9C000 1473 aa26.42■■□□□ 1.82
SMIM11A-205ENST00000481710 SETD5Q9C0A6 1442 aa26.41■■□□□ 1.82
SMIM11A-205ENST00000481710 STRCQ7RTU9 1775 aa26.41■■□□□ 1.82
SMIM11A-205ENST00000481710 SPHKAPQ2M3C7 1700 aa26.41■■□□□ 1.82
SMIM11A-205ENST00000481710 PIK3C2BO00750 1634 aa26.4■■□□□ 1.82
SMIM11A-205ENST00000481710 UBR1Q8IWV7 1749 aa26.4■■□□□ 1.82
SMIM11A-205ENST00000481710 NOS1P29475 1434 aa26.39■■□□□ 1.82
SMIM11A-205ENST00000481710 UGGT1Q9NYU2 1555 aa26.36■■□□□ 1.81
SMIM11A-205ENST00000481710 RAB3GAP2Q9H2M9 1393 aa26.35■■□□□ 1.81
SMIM11A-205ENST00000481710 MYO5BQ9ULV0 1848 aa26.35■■□□□ 1.81
SMIM11A-205ENST00000481710 TRIM52Q96A61 297 aa26.34■■□□□ 1.81
SMIM11A-205ENST00000481710 POLR1AO95602 1720 aaPredicted RBP26.34■■□□□ 1.81
SMIM11A-205ENST00000481710 KDM5AP29375 1690 aaKnown RBP26.33■■□□□ 1.81
SMIM11A-205ENST00000481710 PLA2R1Q13018 1463 aa26.29■■□□□ 1.8
SMIM11A-205ENST00000481710 ADGRB3O60242 1522 aa26.29■■□□□ 1.8
SMIM11A-205ENST00000481710 TRPM2O94759 1503 aa26.25■■□□□ 1.79
SMIM11A-205ENST00000481710 CLTCL1P53675 1640 aa26.25■■□□□ 1.79
SMIM11A-205ENST00000481710 PTPRTO14522 1441 aa26.24■■□□□ 1.79
SMIM11A-205ENST00000481710 TMEM131LA2VDJ0 1609 aa26.24■■□□□ 1.79
SMIM11A-205ENST00000481710 SLC4A1APQ9BWU0 796 aaKnown RBP26.23■■□□□ 1.79
SMIM11A-205ENST00000481710 NEURL4Q96JN8 1562 aa26.23■■□□□ 1.79
SMIM11A-205ENST00000481710 PKD2Q13563 968 aa26.22■■□□□ 1.79
SMIM11A-205ENST00000481710 IDI1Q13907 227 aa26.22■■□□□ 1.79
SMIM11A-205ENST00000481710 KIF1BO60333 1816 aa26.19■■□□□ 1.78
SMIM11A-205ENST00000481710 SLIT1O75093 1534 aa26.19■■□□□ 1.78
SMIM11A-205ENST00000481710 SLC52A1Q9NWF4 448 aa26.18■■□□□ 1.78
SMIM11A-205ENST00000481710 ARHGAP23Q9P227 1491 aa26.17■■□□□ 1.78
SMIM11A-205ENST00000481710 THEMISQ8N1K5 641 aaPredicted RBP26.17■■□□□ 1.78
SMIM11A-205ENST00000481710 MPHOSPH9Q99550 1183 aa26.17■■□□□ 1.78
SMIM11A-205ENST00000481710 NCKAP5LQ9HCH0 1330 aa26.16■■□□□ 1.78
SMIM11A-205ENST00000481710 ACIN1Q9UKV3 1341 aaKnown RBP26.16■■□□□ 1.78
SMIM11A-205ENST00000481710 TRIM26Q12899 539 aaPredicted RBP26.16■■□□□ 1.78
SMIM11A-205ENST00000481710 FOXD1Q16676 465 aa26.14■■□□□ 1.78
SMIM11A-205ENST00000481710 IQGAP1P46940 1657 aa26.13■■□□□ 1.77
SMIM11A-205ENST00000481710 HRCP23327 699 aa26.12■■□□□ 1.77
SMIM11A-205ENST00000481710 STAG3Q9UJ98 1225 aa26.12■■□□□ 1.77
SMIM11A-205ENST00000481710 TMEM2Q9UHN6 1383 aa26.1■■□□□ 1.77
SMIM11A-205ENST00000481710 SCAF11Q99590 1463 aaKnown RBP26.1■■□□□ 1.77
SMIM11A-205ENST00000481710 MED14O60244 1454 aa26.08■■□□□ 1.77
SMIM11A-205ENST00000481710 CHGAP10645 457 aaKnown RBP26.06■■□□□ 1.76
SMIM11A-205ENST00000481710 ANKLE2Q86XL3 938 aa26.06■■□□□ 1.76
SMIM11A-205ENST00000481710 ZFYVE9O95405 1425 aa26.05■■□□□ 1.76
SMIM11A-205ENST00000481710 NPHP4O75161 1426 aaPredicted RBP26.05■■□□□ 1.76
SMIM11A-205ENST00000481710 DMRT2Q9Y5R5 561 aa26.04■■□□□ 1.76
SMIM11A-205ENST00000481710 LTKP29376 864 aa26.03■■□□□ 1.76
SMIM11A-205ENST00000481710 RIMS2Q9UQ26 1411 aa26.02■■□□□ 1.76
SMIM11A-205ENST00000481710 CCDC144AA2RUR9 1427 aa26■■□□□ 1.75
SMIM11A-205ENST00000481710 TXNDC2Q86VQ3 553 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms