RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 GGT6Q6P531 493 aa34.32■■■■□ 3.08
SHISA4-203ENST00000481699 MLECQ14165 292 aa34.31■■■■□ 3.08
SHISA4-203ENST00000481699 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.31■■■■□ 3.08
SHISA4-203ENST00000481699 TRIM52Q96A61 297 aa34.3■■■■□ 3.08
SHISA4-203ENST00000481699 KANK1Q14678 1352 aa34.27■■■■□ 3.08
SHISA4-203ENST00000481699 BCORL1Q5H9F3 1711 aa34.27■■■■□ 3.08
SHISA4-203ENST00000481699 HRCP23327 699 aa34.26■■■■□ 3.08
SHISA4-203ENST00000481699 SIGLEC1Q9BZZ2 1709 aa34.26■■■■□ 3.07
SHISA4-203ENST00000481699 RNF17Q9BXT8 1623 aaKnown RBP34.23■■■■□ 3.07
SHISA4-203ENST00000481699 ESF1Q9H501 851 aaKnown RBP34.23■■■■□ 3.07
SHISA4-203ENST00000481699 NUP155O75694 1391 aa34.21■■■■□ 3.07
SHISA4-203ENST00000481699 UNC13BO14795 1591 aa34.19■■■■□ 3.06
SHISA4-203ENST00000481699 DEPDC5O75140 1603 aa34.19■■■■□ 3.06
SHISA4-203ENST00000481699 PPP6R1Q9UPN7 881 aa34.18■■■■□ 3.06
SHISA4-203ENST00000481699 PRDM15P57071 1507 aaPredicted RBP34.17■■■■□ 3.06
SHISA4-203ENST00000481699 WASHC2CQ9Y4E1 1318 aa34.17■■■■□ 3.06
SHISA4-203ENST00000481699 MROH1Q8NDA8 1641 aa34.13■■■■□ 3.05
SHISA4-203ENST00000481699 KDM5DQ9BY66 1539 aa34.09■■■■□ 3.05
SHISA4-203ENST00000481699 FAM135AQ9P2D6 1515 aa34.09■■■■□ 3.05
SHISA4-203ENST00000481699 SLC4A1APQ9BWU0 796 aaKnown RBP34.08■■■■□ 3.05
SHISA4-203ENST00000481699 IQGAP3Q86VI3 1631 aa34.05■■■■□ 3.04
SHISA4-203ENST00000481699 CNTLNQ9NXG0 1405 aa34.04■■■■□ 3.04
SHISA4-203ENST00000481699 ABCC3O15438 1527 aa34.04■■■■□ 3.04
SHISA4-203ENST00000481699 ZC3H13Q5T200 1668 aaKnown RBP34.04■■■■□ 3.04
SHISA4-203ENST00000481699 VWDEQ8N2E2 1590 aa34.04■■■■□ 3.04
SHISA4-203ENST00000481699 MPHOSPH9Q99550 1183 aa34.02■■■■□ 3.04
SHISA4-203ENST00000481699 CEP152O94986 1710 aa34■■■■□ 3.03
SHISA4-203ENST00000481699 PZPP20742 1482 aa34■■■■□ 3.03
SHISA4-203ENST00000481699 LMTK2Q8IWU2 1503 aa33.99■■■■□ 3.03
SHISA4-203ENST00000481699 FER1L4A9Z1Z3 1794 aa33.99■■■■□ 3.03
SHISA4-203ENST00000481699 CLTCQ00610 1675 aaKnown RBP33.99■■■■□ 3.03
SHISA4-203ENST00000481699 ADAMTSL3P82987 1691 aa33.96■■■■□ 3.03
SHISA4-203ENST00000481699 MADDQ8WXG6 1647 aa33.96■■■■□ 3.03
SHISA4-203ENST00000481699 PKD2Q13563 968 aa33.95■■■■□ 3.03
SHISA4-203ENST00000481699 TET3O43151 1660 aa33.95■■■■□ 3.03
SHISA4-203ENST00000481699 CAMSAP1Q5T5Y3 1602 aa33.93■■■■□ 3.02
SHISA4-203ENST00000481699 EFCAB6Q5THR3 1501 aa33.92■■■■□ 3.02
SHISA4-203ENST00000481699 ZMYM3Q14202 1370 aa33.91■■■■□ 3.02
SHISA4-203ENST00000481699 FBXO41Q8TF61 875 aa33.91■■■■□ 3.02
SHISA4-203ENST00000481699 RIMS1Q86UR5 1692 aaKnown RBP33.9■■■■□ 3.02
SHISA4-203ENST00000481699 MROH2AA6NES4 1674 aa33.88■■■■□ 3.01
SHISA4-203ENST00000481699 PLPPR3Q6T4P5 718 aa33.87■■■■□ 3.01
SHISA4-203ENST00000481699 ARHGAP31Q2M1Z3 1444 aa33.87■■■■□ 3.01
SHISA4-203ENST00000481699 PTPRMP28827 1452 aa33.86■■■■□ 3.01
SHISA4-203ENST00000481699 DHX57Q6P158 1386 aaKnown RBP33.85■■■■□ 3.01
SHISA4-203ENST00000481699 RPRD2Q5VT52 1461 aaKnown RBP33.85■■■■□ 3.01
SHISA4-203ENST00000481699 NPATQ14207 1427 aa33.84■■■■□ 3.01
SHISA4-203ENST00000481699 FOXD1Q16676 465 aa33.83■■■■□ 3.01
SHISA4-203ENST00000481699 E9PCH4 1651 aa33.81■■■■□ 3
SHISA4-203ENST00000481699 CEBPAP49715 358 aaPredicted RBP33.79■■■■□ 3
SHISA4-203ENST00000481699 CCER1Q8TC90 406 aaPredicted RBP33.79■■■■□ 3
SHISA4-203ENST00000481699 FBXO31Q5XUX0 539 aaPredicted RBP33.76■■■□□ 2.99
SHISA4-203ENST00000481699 C3P01024 1663 aa33.76■■■□□ 2.99
SHISA4-203ENST00000481699 ERVK-7P63135 1459 aa33.73■■■□□ 2.99
SHISA4-203ENST00000481699 PREX1Q8TCU6 1659 aa33.7■■■□□ 2.99
SHISA4-203ENST00000481699 TNRQ92752 1358 aa33.68■■■□□ 2.98
SHISA4-203ENST00000481699 NOS1P29475 1434 aa33.68■■■□□ 2.98
SHISA4-203ENST00000481699 PTPRTO14522 1441 aa33.67■■■□□ 2.98
SHISA4-203ENST00000481699 SPATA31D1Q6ZQQ2 1576 aa33.67■■■□□ 2.98
SHISA4-203ENST00000481699 SPHKAPQ2M3C7 1700 aa33.67■■■□□ 2.98
SHISA4-203ENST00000481699 CFAP65Q6ZU64 1925 aaKnown RBP33.67■■■□□ 2.98
SHISA4-203ENST00000481699 ANKRD30BQ9BXX2 1392 aa33.65■■■□□ 2.98
SHISA4-203ENST00000481699 TRPM2O94759 1503 aa33.63■■■□□ 2.97
SHISA4-203ENST00000481699 CCDC144AA2RUR9 1427 aa33.63■■■□□ 2.97
SHISA4-203ENST00000481699 LMTK3Q96Q04 1460 aa33.63■■■□□ 2.97
SHISA4-203ENST00000481699 SLC52A1Q9NWF4 448 aa33.61■■■□□ 2.97
SHISA4-203ENST00000481699 PLA2R1Q13018 1463 aa33.61■■■□□ 2.97
SHISA4-203ENST00000481699 CLSPNQ9HAW4 1339 aa33.59■■■□□ 2.97
SHISA4-203ENST00000481699 SYNMO15061 1565 aa33.59■■■□□ 2.97
SHISA4-203ENST00000481699 CHGAP10645 457 aaKnown RBP33.54■■■□□ 2.96
SHISA4-203ENST00000481699 STAG3Q9UJ98 1225 aa33.54■■■□□ 2.96
SHISA4-203ENST00000481699 NLRP1Q9C000 1473 aa33.53■■■□□ 2.96
SHISA4-203ENST00000481699 IDI1Q13907 227 aa33.53■■■□□ 2.96
SHISA4-203ENST00000481699 UGGT1Q9NYU2 1555 aa33.52■■■□□ 2.96
SHISA4-203ENST00000481699 NEUROD1Q13562 356 aa33.52■■■□□ 2.96
SHISA4-203ENST00000481699 CLTCL1P53675 1640 aa33.51■■■□□ 2.96
SHISA4-203ENST00000481699 HSPA2P54652 639 aa33.51■■■□□ 2.95
SHISA4-203ENST00000481699 SIN3AQ96ST3 1273 aa33.49■■■□□ 2.95
SHISA4-203ENST00000481699 UHRF1BP1Q6BDS2 1440 aa33.47■■■□□ 2.95
SHISA4-203ENST00000481699 PIK3C2BO00750 1634 aa33.47■■■□□ 2.95
SHISA4-203ENST00000481699 MYO3AQ8NEV4 1616 aa33.46■■■□□ 2.95
SHISA4-203ENST00000481699 SETD1BQ9UPS6 1966 aaKnown RBP33.43■■■□□ 2.94
SHISA4-203ENST00000481699 A2ML1A8K2U0 1454 aa33.42■■■□□ 2.94
SHISA4-203ENST00000481699 ZNF326Q5BKZ1 582 aaKnown RBP33.4■■■□□ 2.94
SHISA4-203ENST00000481699 KIF1BO60333 1816 aa33.39■■■□□ 2.94
SHISA4-203ENST00000481699 ADGRB3O60242 1522 aa33.39■■■□□ 2.94
SHISA4-203ENST00000481699 CEP170BQ9Y4F5 1589 aaPredicted RBP33.38■■■□□ 2.93
SHISA4-203ENST00000481699 RGL3Q3MIN7 710 aa33.38■■■□□ 2.93
SHISA4-203ENST00000481699 THEMISQ8N1K5 641 aaPredicted RBP33.35■■■□□ 2.93
SHISA4-203ENST00000481699 TONSLQ96HA7 1378 aa33.34■■■□□ 2.93
SHISA4-203ENST00000481699 ZNF142P52746 1687 aaPredicted RBP33.33■■■□□ 2.93
SHISA4-203ENST00000481699 TMEM131LA2VDJ0 1609 aa33.32■■■□□ 2.92
SHISA4-203ENST00000481699 SPATA31E1Q6ZUB1 1445 aa33.32■■■□□ 2.92
SHISA4-203ENST00000481699 KDM5AP29375 1690 aaKnown RBP33.3■■■□□ 2.92
SHISA4-203ENST00000481699 UBR1Q8IWV7 1749 aa33.29■■■□□ 2.92
SHISA4-203ENST00000481699 NEURL4Q96JN8 1562 aa33.29■■■□□ 2.92
SHISA4-203ENST00000481699 HDGFP51858 240 aaKnown RBP33.27■■■□□ 2.92
SHISA4-203ENST00000481699 CERKQ8TCT0 537 aa33.27■■■□□ 2.92
SHISA4-203ENST00000481699 RPGRIP1LQ68CZ1 1315 aa33.27■■■□□ 2.92
SHISA4-203ENST00000481699 TMEM2Q9UHN6 1383 aa33.22■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms