RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 FAM135AQ9P2D6 1515 aa28.92■■■□□ 2.22
HSPG2-210ENST00000481644 RNF17Q9BXT8 1623 aaKnown RBP28.91■■■□□ 2.22
HSPG2-210ENST00000481644 KDM5DQ9BY66 1539 aa28.91■■■□□ 2.22
HSPG2-210ENST00000481644 PPARGC1BQ86YN6 1023 aaKnown RBP28.91■■■□□ 2.22
HSPG2-210ENST00000481644 KIF15Q9NS87 1388 aa28.9■■■□□ 2.22
HSPG2-210ENST00000481644 NPATQ14207 1427 aa28.9■■■□□ 2.22
HSPG2-210ENST00000481644 RRP7BPQ9NSQ0 103 aa28.87■■■□□ 2.21
HSPG2-210ENST00000481644 CHIC2Q9UKJ5 165 aa28.86■■■□□ 2.21
HSPG2-210ENST00000481644 ANKRD30AQ9BXX3 1397 aa28.86■■■□□ 2.21
HSPG2-210ENST00000481644 WASHC2CQ9Y4E1 1318 aa28.85■■■□□ 2.21
HSPG2-210ENST00000481644 PTPRKQ15262 1439 aa28.85■■■□□ 2.21
HSPG2-210ENST00000481644 ERBINQ96RT1 1412 aa28.84■■■□□ 2.21
HSPG2-210ENST00000481644 ZC3H13Q5T200 1668 aaKnown RBP28.82■■■□□ 2.2
HSPG2-210ENST00000481644 MROH1Q8NDA8 1641 aa28.81■■■□□ 2.2
HSPG2-210ENST00000481644 ADGRL2O95490 1459 aa28.8■■■□□ 2.2
HSPG2-210ENST00000481644 MYO3AQ8NEV4 1616 aa28.8■■■□□ 2.2
HSPG2-210ENST00000481644 NCOA1Q15788 1441 aa28.79■■■□□ 2.2
HSPG2-210ENST00000481644 ABCC3O15438 1527 aa28.78■■■□□ 2.2
HSPG2-210ENST00000481644 PZPP20742 1482 aa28.78■■■□□ 2.2
HSPG2-210ENST00000481644 CEP152O94986 1710 aa28.76■■■□□ 2.19
HSPG2-210ENST00000481644 PRDM15P57071 1507 aaPredicted RBP28.74■■■□□ 2.19
HSPG2-210ENST00000481644 ZNF142P52746 1687 aaPredicted RBP28.74■■■□□ 2.19
HSPG2-210ENST00000481644 DEPDC5O75140 1603 aa28.73■■■□□ 2.19
HSPG2-210ENST00000481644 STRCQ7RTU9 1775 aa28.72■■■□□ 2.19
HSPG2-210ENST00000481644 CEP170BQ9Y4F5 1589 aaPredicted RBP28.71■■■□□ 2.19
HSPG2-210ENST00000481644 CAMSAP1Q5T5Y3 1602 aa28.7■■■□□ 2.19
HSPG2-210ENST00000481644 FBXO31Q5XUX0 539 aaPredicted RBP28.7■■■□□ 2.18
HSPG2-210ENST00000481644 TNRQ92752 1358 aa28.69■■■□□ 2.18
HSPG2-210ENST00000481644 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.69■■■□□ 2.18
HSPG2-210ENST00000481644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.67■■■□□ 2.18
HSPG2-210ENST00000481644 KANK1Q14678 1352 aa28.65■■■□□ 2.18
HSPG2-210ENST00000481644 ANKRD50Q9ULJ7 1429 aa28.64■■■□□ 2.18
HSPG2-210ENST00000481644 ITGAEP38570 1179 aa28.64■■■□□ 2.18
HSPG2-210ENST00000481644 A2ML1A8K2U0 1454 aa28.64■■■□□ 2.17
HSPG2-210ENST00000481644 ROCK1Q13464 1354 aa28.62■■■□□ 2.17
HSPG2-210ENST00000481644 RRBP1Q9P2E9 1410 aaKnown RBP28.62■■■□□ 2.17
HSPG2-210ENST00000481644 DMRT2Q9Y5R5 561 aa28.61■■■□□ 2.17
HSPG2-210ENST00000481644 SPATA31D1Q6ZQQ2 1576 aa28.61■■■□□ 2.17
HSPG2-210ENST00000481644 CFAP65Q6ZU64 1925 aaKnown RBP28.61■■■□□ 2.17
HSPG2-210ENST00000481644 ERVK-7P63135 1459 aa28.59■■■□□ 2.17
HSPG2-210ENST00000481644 VWDEQ8N2E2 1590 aa28.59■■■□□ 2.17
HSPG2-210ENST00000481644 NLRP1Q9C000 1473 aa28.58■■■□□ 2.17
HSPG2-210ENST00000481644 ARHGAP31Q2M1Z3 1444 aa28.57■■■□□ 2.16
HSPG2-210ENST00000481644 PLA2R1Q13018 1463 aa28.57■■■□□ 2.16
HSPG2-210ENST00000481644 LMTK2Q8IWU2 1503 aa28.56■■■□□ 2.16
HSPG2-210ENST00000481644 PTPRTO14522 1441 aa28.54■■■□□ 2.16
HSPG2-210ENST00000481644 UNC13BO14795 1591 aa28.51■■■□□ 2.15
HSPG2-210ENST00000481644 UGGT1Q9NYU2 1555 aa28.51■■■□□ 2.15
HSPG2-210ENST00000481644 NCKAP5LQ9HCH0 1330 aa28.5■■■□□ 2.15
HSPG2-210ENST00000481644 EFCAB6Q5THR3 1501 aa28.49■■■□□ 2.15
HSPG2-210ENST00000481644 PKD2Q13563 968 aa28.49■■■□□ 2.15
HSPG2-210ENST00000481644 POLR1AO95602 1720 aaPredicted RBP28.46■■■□□ 2.15
HSPG2-210ENST00000481644 THEMISQ8N1K5 641 aaPredicted RBP28.45■■■□□ 2.14
HSPG2-210ENST00000481644 TET3O43151 1660 aa28.45■■■□□ 2.14
HSPG2-210ENST00000481644 GCC2Q8IWJ2 1684 aa28.42■■■□□ 2.14
HSPG2-210ENST00000481644 UBR1Q8IWV7 1749 aa28.41■■■□□ 2.14
HSPG2-210ENST00000481644 IQGAP3Q86VI3 1631 aa28.4■■■□□ 2.14
HSPG2-210ENST00000481644 ILDR1Q86SU0 546 aaPredicted RBP28.39■■■□□ 2.14
HSPG2-210ENST00000481644 RPRD2Q5VT52 1461 aaKnown RBP28.39■■■□□ 2.13
HSPG2-210ENST00000481644 SYNMO15061 1565 aa28.37■■■□□ 2.13
HSPG2-210ENST00000481644 NEURL4Q96JN8 1562 aa28.37■■■□□ 2.13
HSPG2-210ENST00000481644 PIK3C2BO00750 1634 aa28.37■■■□□ 2.13
HSPG2-210ENST00000481644 NOS1P29475 1434 aa28.36■■■□□ 2.13
HSPG2-210ENST00000481644 ANKLE2Q86XL3 938 aa28.36■■■□□ 2.13
HSPG2-210ENST00000481644 CERKQ8TCT0 537 aa28.35■■■□□ 2.13
HSPG2-210ENST00000481644 NUP155O75694 1391 aa28.35■■■□□ 2.13
HSPG2-210ENST00000481644 NAIPQ13075 1403 aa28.33■■■□□ 2.13
HSPG2-210ENST00000481644 E9PCH4 1651 aa28.32■■■□□ 2.12
HSPG2-210ENST00000481644 KDM5AP29375 1690 aaKnown RBP28.3■■■□□ 2.12
HSPG2-210ENST00000481644 LTBP4Q8N2S1 1624 aa28.3■■■□□ 2.12
HSPG2-210ENST00000481644 FBXO41Q8TF61 875 aa28.3■■■□□ 2.12
HSPG2-210ENST00000481644 IDI1Q13907 227 aa28.29■■■□□ 2.12
HSPG2-210ENST00000481644 STAG3Q9UJ98 1225 aa28.29■■■□□ 2.12
HSPG2-210ENST00000481644 HFM1A2PYH4 1435 aa28.28■■■□□ 2.12
HSPG2-210ENST00000481644 MED14O60244 1454 aa28.27■■■□□ 2.12
HSPG2-210ENST00000481644 NPHP4O75161 1426 aaPredicted RBP28.27■■■□□ 2.12
HSPG2-210ENST00000481644 SLIT1O75093 1534 aa28.27■■■□□ 2.12
HSPG2-210ENST00000481644 IQGAP1P46940 1657 aa28.26■■■□□ 2.12
HSPG2-210ENST00000481644 ZNF335Q9H4Z2 1342 aaPredicted RBP28.26■■■□□ 2.11
HSPG2-210ENST00000481644 ARHGAP23Q9P227 1491 aa28.26■■■□□ 2.11
HSPG2-210ENST00000481644 ADGRB3O60242 1522 aa28.25■■■□□ 2.11
HSPG2-210ENST00000481644 SLC52A1Q9NWF4 448 aa28.25■■■□□ 2.11
HSPG2-210ENST00000481644 SCAF11Q99590 1463 aaKnown RBP28.23■■■□□ 2.11
HSPG2-210ENST00000481644 TMEM2Q9UHN6 1383 aa28.2■■■□□ 2.1
HSPG2-210ENST00000481644 TXNDC2Q86VQ3 553 aa28.19■■■□□ 2.1
HSPG2-210ENST00000481644 EID1Q9Y6B2 187 aa28.19■■■□□ 2.1
HSPG2-210ENST00000481644 MYO5BQ9ULV0 1848 aa28.18■■■□□ 2.1
HSPG2-210ENST00000481644 LTKP29376 864 aa28.17■■■□□ 2.1
HSPG2-210ENST00000481644 SPHKAPQ2M3C7 1700 aa28.15■■■□□ 2.1
HSPG2-210ENST00000481644 IQSEC2Q5JU85 1478 aa28.15■■■□□ 2.1
HSPG2-210ENST00000481644 TMEM131LA2VDJ0 1609 aa28.14■■■□□ 2.09
HSPG2-210ENST00000481644 TRIM52Q96A61 297 aa28.13■■■□□ 2.09
HSPG2-210ENST00000481644 CPS1P31327 1500 aa28.09■■■□□ 2.09
HSPG2-210ENST00000481644 CHGAP10645 457 aaKnown RBP28.09■■■□□ 2.09
HSPG2-210ENST00000481644 ZFYVE9O95405 1425 aa28.04■■■□□ 2.08
HSPG2-210ENST00000481644 STRCP1A6NGW2 1772 aa28.04■■■□□ 2.08
HSPG2-210ENST00000481644 RIMS2Q9UQ26 1411 aa28.03■■■□□ 2.08
HSPG2-210ENST00000481644 SLC4A1APQ9BWU0 796 aaKnown RBP28.02■■■□□ 2.08
HSPG2-210ENST00000481644 TRPM2O94759 1503 aa28.02■■■□□ 2.08
HSPG2-210ENST00000481644 HDGFP51858 240 aaKnown RBP28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms