RNA–Protein interactions for RNA: ENST00000481606.1

TFE3-202, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-202ENST00000481606 NEURL4Q96JN8 1562 aa8.97□□□□□ -0.97
TFE3-202ENST00000481606 MED1Q15648 1581 aaPredicted RBP8.96□□□□□ -0.97
TFE3-202ENST00000481606 CPS1P31327 1500 aa8.95□□□□□ -0.98
TFE3-202ENST00000481606 KDM5DQ9BY66 1539 aa8.95□□□□□ -0.98
TFE3-202ENST00000481606 ZNF644Q9H582 1327 aaPredicted RBP8.95□□□□□ -0.98
TFE3-202ENST00000481606 TNRQ92752 1358 aa8.95□□□□□ -0.98
TFE3-202ENST00000481606 MBD5Q9P267 1494 aa8.95□□□□□ -0.98
TFE3-202ENST00000481606 FAM135AQ9P2D6 1515 aa8.95□□□□□ -0.98
TFE3-202ENST00000481606 SCAF1Q9H7N4 1312 aaKnown RBP8.94□□□□□ -0.98
TFE3-202ENST00000481606 RTEL1-TNFRSF6BF6WH68 1400 aa8.94□□□□□ -0.98
TFE3-202ENST00000481606 PZPP20742 1482 aa8.94□□□□□ -0.98
TFE3-202ENST00000481606 CCDC141Q6ZP82 1450 aa8.94□□□□□ -0.98
TFE3-202ENST00000481606 VWDEQ8N2E2 1590 aa8.92□□□□□ -0.98
TFE3-202ENST00000481606 CAMSAP2Q08AD1 1489 aa8.92□□□□□ -0.98
TFE3-202ENST00000481606 SHANK2Q9UPX8 1470 aa8.92□□□□□ -0.98
TFE3-202ENST00000481606 CEP162Q5TB80 1403 aa8.92□□□□□ -0.98
TFE3-202ENST00000481606 DHX29Q7Z478 1369 aaKnown RBP8.92□□□□□ -0.98
TFE3-202ENST00000481606 HSPA1LP34931 641 aa8.92□□□□□ -0.98
TFE3-202ENST00000481606 PIP4K2BP78356 416 aa8.91□□□□□ -0.98
TFE3-202ENST00000481606 FBXO31Q5XUX0 539 aaPredicted RBP8.91□□□□□ -0.98
TFE3-202ENST00000481606 IQGAP1P46940 1657 aa8.91□□□□□ -0.98
TFE3-202ENST00000481606 DEPDC5O75140 1603 aa8.91□□□□□ -0.98
TFE3-202ENST00000481606 UGGT1Q9NYU2 1555 aa8.9□□□□□ -0.98
TFE3-202ENST00000481606 NCOA2Q15596 1464 aa8.9□□□□□ -0.98
TFE3-202ENST00000481606 NLRP1Q9C000 1473 aa8.9□□□□□ -0.98
TFE3-202ENST00000481606 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.9□□□□□ -0.98
TFE3-202ENST00000481606 KIF3BO15066 747 aa8.9□□□□□ -0.98
TFE3-202ENST00000481606 NPHP4O75161 1426 aaPredicted RBP8.89□□□□□ -0.99
TFE3-202ENST00000481606 ZC3H13Q5T200 1668 aaKnown RBP8.89□□□□□ -0.99
TFE3-202ENST00000481606 TOM1O60784 492 aa8.89□□□□□ -0.99
TFE3-202ENST00000481606 ALKQ9UM73 1620 aa8.89□□□□□ -0.99
TFE3-202ENST00000481606 SYNMO15061 1565 aa8.89□□□□□ -0.99
TFE3-202ENST00000481606 ARHGEF5Q12774 1597 aa8.89□□□□□ -0.99
TFE3-202ENST00000481606 RNF17Q9BXT8 1623 aaKnown RBP8.88□□□□□ -0.99
TFE3-202ENST00000481606 MSH5O43196 834 aa8.88□□□□□ -0.99
TFE3-202ENST00000481606 STRCP1A6NGW2 1772 aa8.88□□□□□ -0.99
TFE3-202ENST00000481606 MED14O60244 1454 aa8.88□□□□□ -0.99
TFE3-202ENST00000481606 MIA2Q96PC5 1412 aa8.88□□□□□ -0.99
TFE3-202ENST00000481606 WASHC2CQ9Y4E1 1318 aa8.87□□□□□ -0.99
TFE3-202ENST00000481606 ABCC3O15438 1527 aa8.87□□□□□ -0.99
TFE3-202ENST00000481606 ANKLE2Q86XL3 938 aa8.87□□□□□ -0.99
TFE3-202ENST00000481606 CEP152O94986 1710 aa8.86□□□□□ -0.99
TFE3-202ENST00000481606 EIF2AK4Q9P2K8 1649 aaKnown RBP8.86□□□□□ -0.99
TFE3-202ENST00000481606 ERVK-7P63135 1459 aa8.85□□□□□ -0.99
TFE3-202ENST00000481606 MROH1Q8NDA8 1641 aa8.85□□□□□ -0.99
TFE3-202ENST00000481606 THEMISQ8N1K5 641 aaPredicted RBP8.85□□□□□ -0.99
TFE3-202ENST00000481606 MAST1Q9Y2H9 1570 aa8.85□□□□□ -0.99
TFE3-202ENST00000481606 LRRC7Q96NW7 1537 aa8.85□□□□□ -0.99
TFE3-202ENST00000481606 UBR1Q8IWV7 1749 aa8.84□□□□□ -0.99
TFE3-202ENST00000481606 RSPH4AQ5TD94 716 aa8.83□□□□□ -1
TFE3-202ENST00000481606 SCAF11Q99590 1463 aaKnown RBP8.82□□□□□ -1
TFE3-202ENST00000481606 CFAP65Q6ZU64 1925 aaKnown RBP8.82□□□□□ -1
TFE3-202ENST00000481606 TSPY4P0CV99 314 aa8.81□□□□□ -1
TFE3-202ENST00000481606 TSPY10P0CW01 314 aa8.81□□□□□ -1
TFE3-202ENST00000481606 XIRP1Q702N8 1843 aaKnown RBP8.8□□□□□ -1
TFE3-202ENST00000481606 LRRC9Q6ZRR7 1453 aa8.8□□□□□ -1
TFE3-202ENST00000481606 PRDM15P57071 1507 aaPredicted RBP8.8□□□□□ -1
TFE3-202ENST00000481606 DUOX2Q9NRD8 1548 aa8.8□□□□□ -1
TFE3-202ENST00000481606 CROCC2H7BZ55 1655 aa8.79□□□□□ -1
TFE3-202ENST00000481606 ARHGAP23Q9P227 1491 aa8.79□□□□□ -1
TFE3-202ENST00000481606 PIK3C2BO00750 1634 aa8.79□□□□□ -1
TFE3-202ENST00000481606 SLIT1O75093 1534 aa8.79□□□□□ -1
TFE3-202ENST00000481606 MYOM3Q5VTT5 1437 aa8.78□□□□□ -1
TFE3-202ENST00000481606 VPS8Q8N3P4 1428 aa8.78□□□□□ -1
TFE3-202ENST00000481606 ERBINQ96RT1 1412 aa8.76□□□□□ -1.01
TFE3-202ENST00000481606 KIF15Q9NS87 1388 aa8.75□□□□□ -1.01
TFE3-202ENST00000481606 ARHGAP31Q2M1Z3 1444 aa8.75□□□□□ -1.01
TFE3-202ENST00000481606 LTKP29376 864 aa8.75□□□□□ -1.01
TFE3-202ENST00000481606 TXNDC2Q86VQ3 553 aa8.75□□□□□ -1.01
TFE3-202ENST00000481606 ROBO1Q9Y6N7 1651 aa8.75□□□□□ -1.01
TFE3-202ENST00000481606 EFCAB6Q5THR3 1501 aa8.75□□□□□ -1.01
TFE3-202ENST00000481606 PTPN23Q9H3S7 1636 aa8.74□□□□□ -1.01
TFE3-202ENST00000481606 KDM5AP29375 1690 aaKnown RBP8.74□□□□□ -1.01
TFE3-202ENST00000481606 MAP3K1Q13233 1512 aa8.74□□□□□ -1.01
TFE3-202ENST00000481606 TMEM94Q12767 1356 aa8.73□□□□□ -1.01
TFE3-202ENST00000481606 TMEM2Q9UHN6 1383 aa8.73□□□□□ -1.01
TFE3-202ENST00000481606 RGS17Q9UGC6 210 aaPredicted RBP8.73□□□□□ -1.01
TFE3-202ENST00000481606 EID1Q9Y6B2 187 aa8.73□□□□□ -1.01
TFE3-202ENST00000481606 ADGRB3O60242 1522 aa8.73□□□□□ -1.01
TFE3-202ENST00000481606 NWD1Q149M9 1564 aa8.73□□□□□ -1.01
TFE3-202ENST00000481606 ABCC5O15440 1437 aa8.72□□□□□ -1.01
TFE3-202ENST00000481606 FAM135BQ49AJ0 1406 aa8.72□□□□□ -1.01
TFE3-202ENST00000481606 SETD1AO15047 1707 aaKnown RBP8.72□□□□□ -1.01
TFE3-202ENST00000481606 KANK4Q5T7N3 995 aaPredicted RBP8.72□□□□□ -1.01
TFE3-202ENST00000481606 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.72□□□□□ -1.01
TFE3-202ENST00000481606 STAG3Q9UJ98 1225 aa8.72□□□□□ -1.01
TFE3-202ENST00000481606 KANK1Q14678 1352 aa8.72□□□□□ -1.01
TFE3-202ENST00000481606 DAPK1P53355 1430 aa8.71□□□□□ -1.01
TFE3-202ENST00000481606 NKTRP30414 1462 aaKnown RBP8.71□□□□□ -1.01
TFE3-202ENST00000481606 LMTK2Q8IWU2 1503 aa8.7□□□□□ -1.02
TFE3-202ENST00000481606 RRP7BPQ9NSQ0 103 aa8.7□□□□□ -1.02
TFE3-202ENST00000481606 TET3O43151 1660 aa8.69□□□□□ -1.02
TFE3-202ENST00000481606 PHLPP1O60346 1717 aa8.69□□□□□ -1.02
TFE3-202ENST00000481606 KCNA6P17658 529 aa8.68□□□□□ -1.02
TFE3-202ENST00000481606 POTEAQ6S8J7 498 aa8.68□□□□□ -1.02
TFE3-202ENST00000481606 PROSER2Q86WR7 435 aaPredicted RBP8.68□□□□□ -1.02
TFE3-202ENST00000481606 RBM33Q96EV2 1170 aaKnown RBP8.68□□□□□ -1.02
TFE3-202ENST00000481606 SLC26A8Q96RN1 970 aa8.68□□□□□ -1.02
TFE3-202ENST00000481606 NOS1P29475 1434 aa8.68□□□□□ -1.02
TFE3-202ENST00000481606 FGD6Q6ZV73 1430 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms