RNA–Protein interactions for RNA: ENST00000481321.1

CRIM1-207, Transcript of cysteine rich transmembrane BMP regulator 1, humanhuman

TSL 3

Gene CRIM1, Length 346 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRIM1-207ENST00000481321 ZNF335Q9H4Z2 1342 aaPredicted RBP11.19□□□□□ -0.62
CRIM1-207ENST00000481321 POLR1AO95602 1720 aaPredicted RBP11.19□□□□□ -0.62
CRIM1-207ENST00000481321 DNMT1P26358 1616 aaKnown RBP11.19□□□□□ -0.62
CRIM1-207ENST00000481321 PLA2R1Q13018 1463 aa11.19□□□□□ -0.62
CRIM1-207ENST00000481321 ABCC5O15440 1437 aa11.18□□□□□ -0.62
CRIM1-207ENST00000481321 NPATQ14207 1427 aa11.18□□□□□ -0.62
CRIM1-207ENST00000481321 CDC42BPBQ9Y5S2 1711 aa11.18□□□□□ -0.62
CRIM1-207ENST00000481321 HNRNPMP52272 730 aaKnown RBP eCLIP11.18□□□□□ -0.62
CRIM1-207ENST00000481321 ARHGEF5Q12774 1597 aa11.18□□□□□ -0.62
CRIM1-207ENST00000481321 HFM1A2PYH4 1435 aa11.18□□□□□ -0.62
CRIM1-207ENST00000481321 CLSPNQ9HAW4 1339 aa11.17□□□□□ -0.62
CRIM1-207ENST00000481321 CHIC2Q9UKJ5 165 aa11.17□□□□□ -0.62
CRIM1-207ENST00000481321 SHANK2Q9UPX8 1470 aa11.17□□□□□ -0.62
CRIM1-207ENST00000481321 SCAF1Q9H7N4 1312 aaKnown RBP11.16□□□□□ -0.62
CRIM1-207ENST00000481321 CPS1P31327 1500 aa11.16□□□□□ -0.62
CRIM1-207ENST00000481321 HSPA1LP34931 641 aa11.16□□□□□ -0.62
CRIM1-207ENST00000481321 CCDC141Q6ZP82 1450 aa11.16□□□□□ -0.62
CRIM1-207ENST00000481321 CEP170BQ9Y4F5 1589 aaPredicted RBP11.16□□□□□ -0.62
CRIM1-207ENST00000481321 PKD2Q13563 968 aa11.15□□□□□ -0.62
CRIM1-207ENST00000481321 RAB3GAP2Q9H2M9 1393 aa11.15□□□□□ -0.63
CRIM1-207ENST00000481321 MLH3Q9UHC1 1453 aa11.14□□□□□ -0.63
CRIM1-207ENST00000481321 TOM1O60784 492 aa11.14□□□□□ -0.63
CRIM1-207ENST00000481321 RRP7BPQ9NSQ0 103 aa11.14□□□□□ -0.63
CRIM1-207ENST00000481321 SAMD9LQ8IVG5 1584 aa11.14□□□□□ -0.63
CRIM1-207ENST00000481321 CLTCQ00610 1675 aaKnown RBP11.14□□□□□ -0.63
CRIM1-207ENST00000481321 ADGRL2O95490 1459 aa11.13□□□□□ -0.63
CRIM1-207ENST00000481321 MBD5Q9P267 1494 aa11.13□□□□□ -0.63
CRIM1-207ENST00000481321 NAIPQ13075 1403 aa11.13□□□□□ -0.63
CRIM1-207ENST00000481321 PTPRKQ15262 1439 aa11.13□□□□□ -0.63
CRIM1-207ENST00000481321 MYT1LQ9UL68 1186 aa11.13□□□□□ -0.63
CRIM1-207ENST00000481321 SPAG9O60271 1321 aaKnown RBP11.12□□□□□ -0.63
CRIM1-207ENST00000481321 KIDINS220Q9ULH0 1771 aa11.12□□□□□ -0.63
CRIM1-207ENST00000481321 NCKAP5LQ9HCH0 1330 aa11.11□□□□□ -0.63
CRIM1-207ENST00000481321 ADGBQ8N7X0 1667 aa11.11□□□□□ -0.63
CRIM1-207ENST00000481321 RTEL1-TNFRSF6BF6WH68 1400 aa11.11□□□□□ -0.63
CRIM1-207ENST00000481321 PIP4K2BP78356 416 aa11.11□□□□□ -0.63
CRIM1-207ENST00000481321 ABCC1P33527 1531 aa11.1□□□□□ -0.63
CRIM1-207ENST00000481321 SYCP2Q9BX26 1530 aa11.1□□□□□ -0.63
CRIM1-207ENST00000481321 TRIM52Q96A61 297 aa11.1□□□□□ -0.63
CRIM1-207ENST00000481321 PPP6R1Q9UPN7 881 aa11.1□□□□□ -0.63
CRIM1-207ENST00000481321 MAST1Q9Y2H9 1570 aa11.1□□□□□ -0.63
CRIM1-207ENST00000481321 CROCC2H7BZ55 1655 aa11.1□□□□□ -0.63
CRIM1-207ENST00000481321 GCC2Q8IWJ2 1684 aa11.08□□□□□ -0.64
CRIM1-207ENST00000481321 KIF15Q9NS87 1388 aa11.08□□□□□ -0.64
CRIM1-207ENST00000481321 RNF17Q9BXT8 1623 aaKnown RBP11.07□□□□□ -0.64
CRIM1-207ENST00000481321 AFAP1Q8N556 730 aa11.07□□□□□ -0.64
CRIM1-207ENST00000481321 ANKRD50Q9ULJ7 1429 aa11.07□□□□□ -0.64
CRIM1-207ENST00000481321 ZMYM3Q14202 1370 aa11.06□□□□□ -0.64
CRIM1-207ENST00000481321 ALKQ9UM73 1620 aa11.06□□□□□ -0.64
CRIM1-207ENST00000481321 DHX57Q6P158 1386 aaKnown RBP11.05□□□□□ -0.64
CRIM1-207ENST00000481321 SYNMO15061 1565 aa11.05□□□□□ -0.64
CRIM1-207ENST00000481321 NEURL4Q96JN8 1562 aa11.05□□□□□ -0.64
CRIM1-207ENST00000481321 DUOX2Q9NRD8 1548 aa11.04□□□□□ -0.64
CRIM1-207ENST00000481321 PLXNC1O60486 1568 aa11.04□□□□□ -0.64
CRIM1-207ENST00000481321 TIMELESSQ9UNS1 1208 aa11.03□□□□□ -0.64
CRIM1-207ENST00000481321 A2ML1A8K2U0 1454 aa11.03□□□□□ -0.64
CRIM1-207ENST00000481321 VWDEQ8N2E2 1590 aa11.03□□□□□ -0.64
CRIM1-207ENST00000481321 ERBINQ96RT1 1412 aa11.02□□□□□ -0.64
CRIM1-207ENST00000481321 SETD1AO15047 1707 aaKnown RBP11.02□□□□□ -0.65
CRIM1-207ENST00000481321 MPHOSPH9Q99550 1183 aa11.02□□□□□ -0.65
CRIM1-207ENST00000481321 SLC4A1APQ9BWU0 796 aaKnown RBP11.01□□□□□ -0.65
CRIM1-207ENST00000481321 DEPDC5O75140 1603 aa11.01□□□□□ -0.65
CRIM1-207ENST00000481321 ATP7AQ04656 1500 aa11□□□□□ -0.65
CRIM1-207ENST00000481321 IQGAP1P46940 1657 aa11□□□□□ -0.65
CRIM1-207ENST00000481321 NUP155O75694 1391 aa11□□□□□ -0.65
CRIM1-207ENST00000481321 KANK1Q14678 1352 aa11□□□□□ -0.65
CRIM1-207ENST00000481321 DHX29Q7Z478 1369 aaKnown RBP11□□□□□ -0.65
CRIM1-207ENST00000481321 STRCP1A6NGW2 1772 aa10.98□□□□□ -0.65
CRIM1-207ENST00000481321 INO80Q9ULG1 1556 aaPredicted RBP10.98□□□□□ -0.65
CRIM1-207ENST00000481321 RGS17Q9UGC6 210 aaPredicted RBP10.96□□□□□ -0.65
CRIM1-207ENST00000481321 MED14O60244 1454 aa10.95□□□□□ -0.66
CRIM1-207ENST00000481321 A2MP01023 1474 aa10.95□□□□□ -0.66
CRIM1-207ENST00000481321 KIF3BO15066 747 aa10.95□□□□□ -0.66
CRIM1-207ENST00000481321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.95□□□□□ -0.66
CRIM1-207ENST00000481321 KDM5DQ9BY66 1539 aa10.94□□□□□ -0.66
CRIM1-207ENST00000481321 EIF2AK4Q9P2K8 1649 aaKnown RBP10.94□□□□□ -0.66
CRIM1-207ENST00000481321 FAM135AQ9P2D6 1515 aa10.94□□□□□ -0.66
CRIM1-207ENST00000481321 XIRP1Q702N8 1843 aaKnown RBP10.93□□□□□ -0.66
CRIM1-207ENST00000481321 LRRC7Q96NW7 1537 aa10.93□□□□□ -0.66
CRIM1-207ENST00000481321 NPHP4O75161 1426 aaPredicted RBP10.92□□□□□ -0.66
CRIM1-207ENST00000481321 UNC13BO14795 1591 aa10.92□□□□□ -0.66
CRIM1-207ENST00000481321 NEUROD1Q13562 356 aa10.92□□□□□ -0.66
CRIM1-207ENST00000481321 SENP3Q9H4L4 574 aaPredicted RBP10.92□□□□□ -0.66
CRIM1-207ENST00000481321 UGGT1Q9NYU2 1555 aa10.91□□□□□ -0.66
CRIM1-207ENST00000481321 ANKLE2Q86XL3 938 aa10.91□□□□□ -0.66
CRIM1-207ENST00000481321 PZPP20742 1482 aa10.91□□□□□ -0.66
CRIM1-207ENST00000481321 ZC3H13Q5T200 1668 aaKnown RBP10.91□□□□□ -0.66
CRIM1-207ENST00000481321 TONSLQ96HA7 1378 aa10.9□□□□□ -0.66
CRIM1-207ENST00000481321 TNRQ92752 1358 aa10.9□□□□□ -0.67
CRIM1-207ENST00000481321 NLRP1Q9C000 1473 aa10.89□□□□□ -0.67
CRIM1-207ENST00000481321 GGT6Q6P531 493 aa10.89□□□□□ -0.67
CRIM1-207ENST00000481321 POTEAQ6S8J7 498 aa10.89□□□□□ -0.67
CRIM1-207ENST00000481321 ANKRD30BQ9BXX2 1392 aa10.89□□□□□ -0.67
CRIM1-207ENST00000481321 IQGAP3Q86VI3 1631 aa10.88□□□□□ -0.67
CRIM1-207ENST00000481321 SIN3AQ96ST3 1273 aa10.88□□□□□ -0.67
CRIM1-207ENST00000481321 THEMISQ8N1K5 641 aaPredicted RBP10.87□□□□□ -0.67
CRIM1-207ENST00000481321 ROBO1Q9Y6N7 1651 aa10.87□□□□□ -0.67
CRIM1-207ENST00000481321 WASHC2CQ9Y4E1 1318 aa10.86□□□□□ -0.67
CRIM1-207ENST00000481321 PRDM15P57071 1507 aaPredicted RBP10.84□□□□□ -0.67
CRIM1-207ENST00000481321 PHLPP1O60346 1717 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms