RNA–Protein interactions for RNA: ENST00000481278.5

TMCO1-206, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-206ENST00000481278 SHANK2Q9UPX8 1470 aa17.32■□□□□ 0.36
TMCO1-206ENST00000481278 CCNB3Q8WWL7 1395 aa17.32■□□□□ 0.36
TMCO1-206ENST00000481278 PZPP20742 1482 aa17.31■□□□□ 0.36
TMCO1-206ENST00000481278 DHX29Q7Z478 1369 aaKnown RBP17.31■□□□□ 0.36
TMCO1-206ENST00000481278 FBXO31Q5XUX0 539 aaPredicted RBP17.31■□□□□ 0.36
TMCO1-206ENST00000481278 POLR1AO95602 1720 aaPredicted RBP17.3■□□□□ 0.36
TMCO1-206ENST00000481278 TNRQ92752 1358 aa17.29■□□□□ 0.36
TMCO1-206ENST00000481278 MED14O60244 1454 aa17.29■□□□□ 0.36
TMCO1-206ENST00000481278 FAM135AQ9P2D6 1515 aa17.28■□□□□ 0.36
TMCO1-206ENST00000481278 KDM5DQ9BY66 1539 aa17.27■□□□□ 0.36
TMCO1-206ENST00000481278 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.25■□□□□ 0.35
TMCO1-206ENST00000481278 DEPDC5O75140 1603 aa17.25■□□□□ 0.35
TMCO1-206ENST00000481278 CEP162Q5TB80 1403 aa17.24■□□□□ 0.35
TMCO1-206ENST00000481278 PIP4K2BP78356 416 aa17.24■□□□□ 0.35
TMCO1-206ENST00000481278 MTUS2Q5JR59 1369 aa17.24■□□□□ 0.35
TMCO1-206ENST00000481278 MIA2Q96PC5 1412 aa17.23■□□□□ 0.35
TMCO1-206ENST00000481278 TOM1O60784 492 aa17.23■□□□□ 0.35
TMCO1-206ENST00000481278 NLRP1Q9C000 1473 aa17.23■□□□□ 0.35
TMCO1-206ENST00000481278 EHBP1L1Q8N3D4 1523 aa17.22■□□□□ 0.35
TMCO1-206ENST00000481278 STRCP1A6NGW2 1772 aa17.22■□□□□ 0.35
TMCO1-206ENST00000481278 NPHP4O75161 1426 aaPredicted RBP17.21■□□□□ 0.35
TMCO1-206ENST00000481278 CCDC141Q6ZP82 1450 aa17.21■□□□□ 0.35
TMCO1-206ENST00000481278 KIF3BO15066 747 aa17.2■□□□□ 0.34
TMCO1-206ENST00000481278 LRRC7Q96NW7 1537 aa17.2■□□□□ 0.34
TMCO1-206ENST00000481278 UGGT1Q9NYU2 1555 aa17.19■□□□□ 0.34
TMCO1-206ENST00000481278 CAMSAP2Q08AD1 1489 aa17.18■□□□□ 0.34
TMCO1-206ENST00000481278 ANKLE2Q86XL3 938 aa17.18■□□□□ 0.34
TMCO1-206ENST00000481278 SCAF1Q9H7N4 1312 aaKnown RBP17.18■□□□□ 0.34
TMCO1-206ENST00000481278 IQGAP1P46940 1657 aa17.16■□□□□ 0.34
TMCO1-206ENST00000481278 RNF17Q9BXT8 1623 aaKnown RBP17.15■□□□□ 0.34
TMCO1-206ENST00000481278 THEMISQ8N1K5 641 aaPredicted RBP17.15■□□□□ 0.34
TMCO1-206ENST00000481278 ABCC3O15438 1527 aa17.15■□□□□ 0.34
TMCO1-206ENST00000481278 MROH1Q8NDA8 1641 aa17.14■□□□□ 0.33
TMCO1-206ENST00000481278 ZC3H13Q5T200 1668 aaKnown RBP17.14■□□□□ 0.33
TMCO1-206ENST00000481278 NCOA2Q15596 1464 aa17.14■□□□□ 0.33
TMCO1-206ENST00000481278 RGS17Q9UGC6 210 aaPredicted RBP17.14■□□□□ 0.33
TMCO1-206ENST00000481278 WASHC2CQ9Y4E1 1318 aa17.14■□□□□ 0.33
TMCO1-206ENST00000481278 SYNMO15061 1565 aa17.14■□□□□ 0.33
TMCO1-206ENST00000481278 ARHGEF5Q12774 1597 aa17.14■□□□□ 0.33
TMCO1-206ENST00000481278 ERVK-7P63135 1459 aa17.12■□□□□ 0.33
TMCO1-206ENST00000481278 ARHGAP23Q9P227 1491 aa17.1■□□□□ 0.33
TMCO1-206ENST00000481278 RSPH4AQ5TD94 716 aa17.09■□□□□ 0.33
TMCO1-206ENST00000481278 MAST1Q9Y2H9 1570 aa17.09■□□□□ 0.33
TMCO1-206ENST00000481278 UBR1Q8IWV7 1749 aa17.07■□□□□ 0.32
TMCO1-206ENST00000481278 SLIT1O75093 1534 aa17.06■□□□□ 0.32
TMCO1-206ENST00000481278 XIRP1Q702N8 1843 aaKnown RBP17.05■□□□□ 0.32
TMCO1-206ENST00000481278 PHF23Q9BUL5 403 aaPredicted RBP17.05■□□□□ 0.32
TMCO1-206ENST00000481278 EIF2AK4Q9P2K8 1649 aaKnown RBP17.05■□□□□ 0.32
TMCO1-206ENST00000481278 SCAF11Q99590 1463 aaKnown RBP17.05■□□□□ 0.32
TMCO1-206ENST00000481278 LTKP29376 864 aa17.04■□□□□ 0.32
TMCO1-206ENST00000481278 ARHGAP31Q2M1Z3 1444 aa17.01■□□□□ 0.31
TMCO1-206ENST00000481278 CEP152O94986 1710 aa16.99■□□□□ 0.31
TMCO1-206ENST00000481278 FAM135BQ49AJ0 1406 aa16.99■□□□□ 0.31
TMCO1-206ENST00000481278 SENP3Q9H4L4 574 aaPredicted RBP16.99■□□□□ 0.31
TMCO1-206ENST00000481278 PRDM15P57071 1507 aaPredicted RBP16.99■□□□□ 0.31
TMCO1-206ENST00000481278 TSPY4P0CV99 314 aa16.98■□□□□ 0.31
TMCO1-206ENST00000481278 TSPY10P0CW01 314 aa16.98■□□□□ 0.31
TMCO1-206ENST00000481278 MAP3K1Q13233 1512 aa16.97■□□□□ 0.31
TMCO1-206ENST00000481278 LRRC9Q6ZRR7 1453 aa16.97■□□□□ 0.31
TMCO1-206ENST00000481278 POTEAQ6S8J7 498 aa16.96■□□□□ 0.31
TMCO1-206ENST00000481278 DUOX2Q9NRD8 1548 aa16.95■□□□□ 0.3
TMCO1-206ENST00000481278 TET3O43151 1660 aa16.94■□□□□ 0.3
TMCO1-206ENST00000481278 PIK3C2BO00750 1634 aa16.93■□□□□ 0.3
TMCO1-206ENST00000481278 TMEM2Q9UHN6 1383 aa16.93■□□□□ 0.3
TMCO1-206ENST00000481278 TXNDC2Q86VQ3 553 aa16.93■□□□□ 0.3
TMCO1-206ENST00000481278 TMEM94Q12767 1356 aa16.91■□□□□ 0.3
TMCO1-206ENST00000481278 MYOM3Q5VTT5 1437 aa16.9■□□□□ 0.3
TMCO1-206ENST00000481278 KANK4Q5T7N3 995 aaPredicted RBP16.9■□□□□ 0.3
TMCO1-206ENST00000481278 ERBINQ96RT1 1412 aa16.89■□□□□ 0.29
TMCO1-206ENST00000481278 KDM5AP29375 1690 aaKnown RBP16.89■□□□□ 0.29
TMCO1-206ENST00000481278 LMTK2Q8IWU2 1503 aa16.89■□□□□ 0.29
TMCO1-206ENST00000481278 NWD1Q149M9 1564 aa16.89■□□□□ 0.29
TMCO1-206ENST00000481278 ABCC5O15440 1437 aa16.88■□□□□ 0.29
TMCO1-206ENST00000481278 ROBO1Q9Y6N7 1651 aa16.88■□□□□ 0.29
TMCO1-206ENST00000481278 KIF15Q9NS87 1388 aa16.88■□□□□ 0.29
TMCO1-206ENST00000481278 VPS8Q8N3P4 1428 aa16.87■□□□□ 0.29
TMCO1-206ENST00000481278 EFCAB6Q5THR3 1501 aa16.86■□□□□ 0.29
TMCO1-206ENST00000481278 CFAP65Q6ZU64 1925 aaKnown RBP16.86■□□□□ 0.29
TMCO1-206ENST00000481278 KCNA6P17658 529 aa16.86■□□□□ 0.29
TMCO1-206ENST00000481278 NOS1P29475 1434 aa16.85■□□□□ 0.29
TMCO1-206ENST00000481278 CROCC2H7BZ55 1655 aa16.85■□□□□ 0.29
TMCO1-206ENST00000481278 IDI1Q13907 227 aa16.84■□□□□ 0.29
TMCO1-206ENST00000481278 NKTRP30414 1462 aaKnown RBP16.84■□□□□ 0.29
TMCO1-206ENST00000481278 RBM33Q96EV2 1170 aaKnown RBP16.83■□□□□ 0.28
TMCO1-206ENST00000481278 EID1Q9Y6B2 187 aa16.83■□□□□ 0.28
TMCO1-206ENST00000481278 SETD1AO15047 1707 aaKnown RBP16.82■□□□□ 0.28
TMCO1-206ENST00000481278 SLC26A8Q96RN1 970 aa16.81■□□□□ 0.28
TMCO1-206ENST00000481278 ADGRB3O60242 1522 aa16.8■□□□□ 0.28
TMCO1-206ENST00000481278 ZFYVE9O95405 1425 aa16.79■□□□□ 0.28
TMCO1-206ENST00000481278 LRP6O75581 1613 aa16.79■□□□□ 0.28
TMCO1-206ENST00000481278 COL16A1Q07092 1604 aaPredicted RBP16.79■□□□□ 0.28
TMCO1-206ENST00000481278 RRP7BPQ9NSQ0 103 aa16.79■□□□□ 0.28
TMCO1-206ENST00000481278 DAPK1P53355 1430 aa16.79■□□□□ 0.28
TMCO1-206ENST00000481278 PROSER2Q86WR7 435 aaPredicted RBP16.77■□□□□ 0.28
TMCO1-206ENST00000481278 PTPN23Q9H3S7 1636 aa16.76■□□□□ 0.27
TMCO1-206ENST00000481278 JCADQ9P266 1359 aa16.76■□□□□ 0.27
TMCO1-206ENST00000481278 PHLPP1O60346 1717 aa16.74■□□□□ 0.27
TMCO1-206ENST00000481278 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.74■□□□□ 0.272e-6■■■■□ 19.5
TMCO1-206ENST00000481278 SLAIN2Q9P270 581 aa16.74■□□□□ 0.27
TMCO1-206ENST00000481278 MSH6P52701 1360 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms