RNA–Protein interactions for RNA: ENST00000480856.1

FNDC1-203, Transcript of fibronectin type III domain containing 1, humanhuman

TSL 3

Gene FNDC1, Length 789 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC1-203ENST00000480856 NCOA1Q15788 1441 aa24.75■■□□□ 1.55
FNDC1-203ENST00000480856 ADGRL2O95490 1459 aa24.75■■□□□ 1.55
FNDC1-203ENST00000480856 PTPRKQ15262 1439 aa24.74■■□□□ 1.55
FNDC1-203ENST00000480856 RNF17Q9BXT8 1623 aaKnown RBP24.74■■□□□ 1.55
FNDC1-203ENST00000480856 ERBINQ96RT1 1412 aa24.73■■□□□ 1.55
FNDC1-203ENST00000480856 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.73■■□□□ 1.55
FNDC1-203ENST00000480856 KDM5DQ9BY66 1539 aa24.71■■□□□ 1.55
FNDC1-203ENST00000480856 WASHC2CQ9Y4E1 1318 aa24.71■■□□□ 1.55
FNDC1-203ENST00000480856 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.69■■□□□ 1.54
FNDC1-203ENST00000480856 PPP6R1Q9UPN7 881 aa24.69■■□□□ 1.54
FNDC1-203ENST00000480856 ZMYM3Q14202 1370 aa24.68■■□□□ 1.54
FNDC1-203ENST00000480856 CEP152O94986 1710 aa24.68■■□□□ 1.54
FNDC1-203ENST00000480856 MROH1Q8NDA8 1641 aa24.67■■□□□ 1.54
FNDC1-203ENST00000480856 PREX1Q8TCU6 1659 aa24.66■■□□□ 1.54
FNDC1-203ENST00000480856 ZC3H13Q5T200 1668 aaKnown RBP24.66■■□□□ 1.54
FNDC1-203ENST00000480856 FAM135AQ9P2D6 1515 aa24.65■■□□□ 1.54
FNDC1-203ENST00000480856 ANKRD50Q9ULJ7 1429 aa24.64■■□□□ 1.54
FNDC1-203ENST00000480856 ROCK1Q13464 1354 aa24.64■■□□□ 1.53
FNDC1-203ENST00000480856 ABCC3O15438 1527 aa24.62■■□□□ 1.53
FNDC1-203ENST00000480856 PRDM15P57071 1507 aaPredicted RBP24.62■■□□□ 1.53
FNDC1-203ENST00000480856 DEPDC5O75140 1603 aa24.62■■□□□ 1.53
FNDC1-203ENST00000480856 KANK1Q14678 1352 aa24.61■■□□□ 1.53
FNDC1-203ENST00000480856 LMTK3Q96Q04 1460 aa24.61■■□□□ 1.53
FNDC1-203ENST00000480856 SETD1BQ9UPS6 1966 aaKnown RBP24.6■■□□□ 1.53
FNDC1-203ENST00000480856 CAMSAP1Q5T5Y3 1602 aa24.59■■□□□ 1.53
FNDC1-203ENST00000480856 UHRF1BP1Q6BDS2 1440 aa24.59■■□□□ 1.53
FNDC1-203ENST00000480856 NPATQ14207 1427 aa24.57■■□□□ 1.52
FNDC1-203ENST00000480856 CFAP65Q6ZU64 1925 aaKnown RBP24.57■■□□□ 1.52
FNDC1-203ENST00000480856 HSPA2P54652 639 aa24.56■■□□□ 1.52
FNDC1-203ENST00000480856 PZPP20742 1482 aa24.55■■□□□ 1.52
FNDC1-203ENST00000480856 FBXO31Q5XUX0 539 aaPredicted RBP24.54■■□□□ 1.52
FNDC1-203ENST00000480856 MYO3AQ8NEV4 1616 aa24.53■■□□□ 1.52
FNDC1-203ENST00000480856 GCC2Q8IWJ2 1684 aa24.53■■□□□ 1.52
FNDC1-203ENST00000480856 UNC13BO14795 1591 aa24.51■■□□□ 1.51
FNDC1-203ENST00000480856 TNRQ92752 1358 aa24.49■■□□□ 1.51
FNDC1-203ENST00000480856 VWDEQ8N2E2 1590 aa24.48■■□□□ 1.51
FNDC1-203ENST00000480856 NAIPQ13075 1403 aa24.46■■□□□ 1.51
FNDC1-203ENST00000480856 ZNF142P52746 1687 aaPredicted RBP24.45■■□□□ 1.5
FNDC1-203ENST00000480856 CEP170BQ9Y4F5 1589 aaPredicted RBP24.45■■□□□ 1.5
FNDC1-203ENST00000480856 ERVK-7P63135 1459 aa24.45■■□□□ 1.5
FNDC1-203ENST00000480856 EFCAB6Q5THR3 1501 aa24.44■■□□□ 1.5
FNDC1-203ENST00000480856 LMTK2Q8IWU2 1503 aa24.44■■□□□ 1.5
FNDC1-203ENST00000480856 TET3O43151 1660 aa24.43■■□□□ 1.5
FNDC1-203ENST00000480856 HFM1A2PYH4 1435 aa24.43■■□□□ 1.5
FNDC1-203ENST00000480856 SPATA31D1Q6ZQQ2 1576 aa24.42■■□□□ 1.5
FNDC1-203ENST00000480856 NUP155O75694 1391 aa24.42■■□□□ 1.5
FNDC1-203ENST00000480856 IQGAP3Q86VI3 1631 aa24.41■■□□□ 1.5
FNDC1-203ENST00000480856 ARHGAP31Q2M1Z3 1444 aa24.4■■□□□ 1.5
FNDC1-203ENST00000480856 A2ML1A8K2U0 1454 aa24.38■■□□□ 1.49
FNDC1-203ENST00000480856 TRIM52Q96A61 297 aa24.36■■□□□ 1.49
FNDC1-203ENST00000480856 NLRP1Q9C000 1473 aa24.36■■□□□ 1.49
FNDC1-203ENST00000480856 E9PCH4 1651 aa24.34■■□□□ 1.49
FNDC1-203ENST00000480856 STRCQ7RTU9 1775 aa24.33■■□□□ 1.49
FNDC1-203ENST00000480856 UGGT1Q9NYU2 1555 aa24.33■■□□□ 1.48
FNDC1-203ENST00000480856 RPRD2Q5VT52 1461 aaKnown RBP24.31■■□□□ 1.48
FNDC1-203ENST00000480856 SYNMO15061 1565 aa24.3■■□□□ 1.48
FNDC1-203ENST00000480856 PIK3C2BO00750 1634 aa24.28■■□□□ 1.48
FNDC1-203ENST00000480856 STAG3Q9UJ98 1225 aa24.27■■□□□ 1.48
FNDC1-203ENST00000480856 UBR1Q8IWV7 1749 aa24.27■■□□□ 1.48
FNDC1-203ENST00000480856 NCKAP5LQ9HCH0 1330 aa24.26■■□□□ 1.47
FNDC1-203ENST00000480856 NOS1P29475 1434 aa24.26■■□□□ 1.47
FNDC1-203ENST00000480856 THEMISQ8N1K5 641 aaPredicted RBP24.25■■□□□ 1.47
FNDC1-203ENST00000480856 SETD5Q9C0A6 1442 aa24.25■■□□□ 1.47
FNDC1-203ENST00000480856 POLR1AO95602 1720 aaPredicted RBP24.24■■□□□ 1.47
FNDC1-203ENST00000480856 PLA2R1Q13018 1463 aa24.24■■□□□ 1.47
FNDC1-203ENST00000480856 SPHKAPQ2M3C7 1700 aa24.22■■□□□ 1.47
FNDC1-203ENST00000480856 IDI1Q13907 227 aa24.21■■□□□ 1.47
FNDC1-203ENST00000480856 SLC4A1APQ9BWU0 796 aaKnown RBP24.21■■□□□ 1.47
FNDC1-203ENST00000480856 DMRT2Q9Y5R5 561 aa24.21■■□□□ 1.47
FNDC1-203ENST00000480856 RAB3GAP2Q9H2M9 1393 aa24.18■■□□□ 1.46
FNDC1-203ENST00000480856 CHGAP10645 457 aaKnown RBP24.18■■□□□ 1.46
FNDC1-203ENST00000480856 PKD2Q13563 968 aa24.18■■□□□ 1.46
FNDC1-203ENST00000480856 SLC52A1Q9NWF4 448 aa24.18■■□□□ 1.46
FNDC1-203ENST00000480856 MYO5BQ9ULV0 1848 aa24.17■■□□□ 1.46
FNDC1-203ENST00000480856 ADGRB3O60242 1522 aa24.17■■□□□ 1.46
FNDC1-203ENST00000480856 ANKLE2Q86XL3 938 aa24.16■■□□□ 1.46
FNDC1-203ENST00000480856 KDM5AP29375 1690 aaKnown RBP24.15■■□□□ 1.46
FNDC1-203ENST00000480856 PTPRTO14522 1441 aa24.14■■□□□ 1.45
FNDC1-203ENST00000480856 NEURL4Q96JN8 1562 aa24.12■■□□□ 1.45
FNDC1-203ENST00000480856 FOXD1Q16676 465 aa24.11■■□□□ 1.45
FNDC1-203ENST00000480856 TMEM131LA2VDJ0 1609 aa24.1■■□□□ 1.45
FNDC1-203ENST00000480856 TXNDC2Q86VQ3 553 aa24.09■■□□□ 1.45
FNDC1-203ENST00000480856 MPHOSPH9Q99550 1183 aa24.09■■□□□ 1.45
FNDC1-203ENST00000480856 EID1Q9Y6B2 187 aa24.09■■□□□ 1.45
FNDC1-203ENST00000480856 SLIT1O75093 1534 aa24.09■■□□□ 1.45
FNDC1-203ENST00000480856 IQGAP1P46940 1657 aa24.08■■□□□ 1.45
FNDC1-203ENST00000480856 SCAF11Q99590 1463 aaKnown RBP24.08■■□□□ 1.45
FNDC1-203ENST00000480856 TMEM2Q9UHN6 1383 aa24.08■■□□□ 1.45
FNDC1-203ENST00000480856 CLTCL1P53675 1640 aa24.08■■□□□ 1.45
FNDC1-203ENST00000480856 TRPM2O94759 1503 aa24.08■■□□□ 1.45
FNDC1-203ENST00000480856 ACIN1Q9UKV3 1341 aaKnown RBP24.08■■□□□ 1.44
FNDC1-203ENST00000480856 NPHP4O75161 1426 aaPredicted RBP24.07■■□□□ 1.44
FNDC1-203ENST00000480856 ARHGAP23Q9P227 1491 aa24.07■■□□□ 1.44
FNDC1-203ENST00000480856 SENP3Q9H4L4 574 aaPredicted RBP24.05■■□□□ 1.44
FNDC1-203ENST00000480856 KIF1BO60333 1816 aa24.05■■□□□ 1.44
FNDC1-203ENST00000480856 LTKP29376 864 aa24.04■■□□□ 1.44
FNDC1-203ENST00000480856 PPP1R15AO75807 674 aaPredicted RBP24.02■■□□□ 1.44
FNDC1-203ENST00000480856 BCANQ96GW7 911 aa24.02■■□□□ 1.44
FNDC1-203ENST00000480856 MED14O60244 1454 aa24.01■■□□□ 1.43
FNDC1-203ENST00000480856 ZNF326Q5BKZ1 582 aaKnown RBP24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms