RNA–Protein interactions for RNA: ENST00000480617.1

CNKSR1-205, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 467 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-205ENST00000480617 CFDP1Q9UEE9 299 aaPredicted RBP12.2□□□□□ -0.46
CNKSR1-205ENST00000480617 VWDEQ8N2E2 1590 aa12.2□□□□□ -0.46
CNKSR1-205ENST00000480617 ADRA2BP18089 450 aa12.19□□□□□ -0.46
CNKSR1-205ENST00000480617 SYCP2Q9BX26 1530 aa12.19□□□□□ -0.46
CNKSR1-205ENST00000480617 PLEKHH2Q8IVE3 1493 aa12.19□□□□□ -0.46
CNKSR1-205ENST00000480617 DHX29Q7Z478 1369 aaKnown RBP12.18□□□□□ -0.46
CNKSR1-205ENST00000480617 TNRQ92752 1358 aa12.18□□□□□ -0.46
CNKSR1-205ENST00000480617 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.18□□□□□ -0.46
CNKSR1-205ENST00000480617 EHMT2Q96KQ7 1210 aa12.18□□□□□ -0.46
CNKSR1-205ENST00000480617 MIA2Q96PC5 1412 aa12.17□□□□□ -0.46
CNKSR1-205ENST00000480617 INO80Q9ULG1 1556 aaPredicted RBP12.17□□□□□ -0.46
CNKSR1-205ENST00000480617 RTEL1-TNFRSF6BF6WH68 1400 aa12.16□□□□□ -0.46
CNKSR1-205ENST00000480617 NPHP4O75161 1426 aaPredicted RBP12.16□□□□□ -0.46
CNKSR1-205ENST00000480617 LRRC7Q96NW7 1537 aa12.16□□□□□ -0.46
CNKSR1-205ENST00000480617 PZPP20742 1482 aa12.14□□□□□ -0.47
CNKSR1-205ENST00000480617 MBD5Q9P267 1494 aa12.14□□□□□ -0.47
CNKSR1-205ENST00000480617 ZNF644Q9H582 1327 aaPredicted RBP12.14□□□□□ -0.47
CNKSR1-205ENST00000480617 KIF3BO15066 747 aa12.14□□□□□ -0.47
CNKSR1-205ENST00000480617 POTEAQ6S8J7 498 aa12.14□□□□□ -0.47
CNKSR1-205ENST00000480617 WASHC2CQ9Y4E1 1318 aa12.13□□□□□ -0.47
CNKSR1-205ENST00000480617 DEPDC5O75140 1603 aa12.13□□□□□ -0.47
CNKSR1-205ENST00000480617 POLR1AO95602 1720 aaPredicted RBP12.13□□□□□ -0.47
CNKSR1-205ENST00000480617 NLRP1Q9C000 1473 aa12.13□□□□□ -0.47
CNKSR1-205ENST00000480617 CCNB3Q8WWL7 1395 aa12.12□□□□□ -0.47
CNKSR1-205ENST00000480617 ADGBQ8N7X0 1667 aa12.11□□□□□ -0.47
CNKSR1-205ENST00000480617 UGGT1Q9NYU2 1555 aa12.1□□□□□ -0.47
CNKSR1-205ENST00000480617 FYCO1Q9BQS8 1478 aa12.1□□□□□ -0.47
CNKSR1-205ENST00000480617 RSPH4AQ5TD94 716 aa12.1□□□□□ -0.47
CNKSR1-205ENST00000480617 FAM135AQ9P2D6 1515 aa12.1□□□□□ -0.47
CNKSR1-205ENST00000480617 STRCP1A6NGW2 1772 aa12.09□□□□□ -0.47
CNKSR1-205ENST00000480617 FAM135BQ49AJ0 1406 aa12.09□□□□□ -0.47
CNKSR1-205ENST00000480617 KDM5DQ9BY66 1539 aa12.06□□□□□ -0.48
CNKSR1-205ENST00000480617 LTKP29376 864 aa12.05□□□□□ -0.48
CNKSR1-205ENST00000480617 IQGAP1P46940 1657 aa12.05□□□□□ -0.48
CNKSR1-205ENST00000480617 RNF17Q9BXT8 1623 aaKnown RBP12.04□□□□□ -0.48
CNKSR1-205ENST00000480617 MTUS2Q5JR59 1369 aa12.04□□□□□ -0.48
CNKSR1-205ENST00000480617 TXNDC2Q86VQ3 553 aa12.03□□□□□ -0.48
CNKSR1-205ENST00000480617 SYNMO15061 1565 aa12.02□□□□□ -0.49
CNKSR1-205ENST00000480617 ZC3H13Q5T200 1668 aaKnown RBP12□□□□□ -0.49
CNKSR1-205ENST00000480617 TSPY4P0CV99 314 aa12□□□□□ -0.49
CNKSR1-205ENST00000480617 TSPY10P0CW01 314 aa12□□□□□ -0.49
CNKSR1-205ENST00000480617 NCOA2Q15596 1464 aa12□□□□□ -0.49
CNKSR1-205ENST00000480617 ARHGAP23Q9P227 1491 aa12□□□□□ -0.49
CNKSR1-205ENST00000480617 KCNA6P17658 529 aa11.99□□□□□ -0.49
CNKSR1-205ENST00000480617 UPF1Q92900 1129 aaKnown RBP eCLIP11.99□□□□□ -0.49
CNKSR1-205ENST00000480617 CEP162Q5TB80 1403 aa11.99□□□□□ -0.49
CNKSR1-205ENST00000480617 SCAF11Q99590 1463 aaKnown RBP11.99□□□□□ -0.49
CNKSR1-205ENST00000480617 TIAM1Q13009 1591 aa11.99□□□□□ -0.49
CNKSR1-205ENST00000480617 ERVK-7P63135 1459 aa11.98□□□□□ -0.49
CNKSR1-205ENST00000480617 CCDC141Q6ZP82 1450 aa11.98□□□□□ -0.49
CNKSR1-205ENST00000480617 XIRP1Q702N8 1843 aaKnown RBP11.97□□□□□ -0.49
CNKSR1-205ENST00000480617 SLIT1O75093 1534 aa11.97□□□□□ -0.49
CNKSR1-205ENST00000480617 TMEM94Q12767 1356 aa11.97□□□□□ -0.49
CNKSR1-205ENST00000480617 EID1Q9Y6B2 187 aa11.96□□□□□ -0.49
CNKSR1-205ENST00000480617 ABCC3O15438 1527 aa11.96□□□□□ -0.5
CNKSR1-205ENST00000480617 SLAIN2Q9P270 581 aa11.95□□□□□ -0.5
CNKSR1-205ENST00000480617 PROSER2Q86WR7 435 aaPredicted RBP11.94□□□□□ -0.5
CNKSR1-205ENST00000480617 UBR1Q8IWV7 1749 aa11.94□□□□□ -0.5
CNKSR1-205ENST00000480617 TMEM2Q9UHN6 1383 aa11.93□□□□□ -0.5
CNKSR1-205ENST00000480617 ARHGAP31Q2M1Z3 1444 aa11.93□□□□□ -0.5
CNKSR1-205ENST00000480617 JCADQ9P266 1359 aa11.92□□□□□ -0.5
CNKSR1-205ENST00000480617 CAMSAP2Q08AD1 1489 aa11.92□□□□□ -0.5
CNKSR1-205ENST00000480617 ARHGEF5Q12774 1597 aa11.92□□□□□ -0.5
CNKSR1-205ENST00000480617 SRCAPQ6ZRS2 3230 aa11.91□□□□□ -0.5
CNKSR1-205ENST00000480617 RBM33Q96EV2 1170 aaKnown RBP11.91□□□□□ -0.5
CNKSR1-205ENST00000480617 EHBP1L1Q8N3D4 1523 aa11.91□□□□□ -0.5
CNKSR1-205ENST00000480617 TET3O43151 1660 aa11.91□□□□□ -0.5
CNKSR1-205ENST00000480617 IDI1Q13907 227 aa11.9□□□□□ -0.5
CNKSR1-205ENST00000480617 ZNF772Q68DY9 489 aaPredicted RBP11.9□□□□□ -0.5
CNKSR1-205ENST00000480617 SLC26A8Q96RN1 970 aa11.9□□□□□ -0.5
CNKSR1-205ENST00000480617 ROBO1Q9Y6N7 1651 aa11.9□□□□□ -0.5
CNKSR1-205ENST00000480617 MAP3K1Q13233 1512 aa11.9□□□□□ -0.5
CNKSR1-205ENST00000480617 MROH1Q8NDA8 1641 aa11.89□□□□□ -0.51
CNKSR1-205ENST00000480617 LRRC9Q6ZRR7 1453 aa11.89□□□□□ -0.51
CNKSR1-205ENST00000480617 SPATA31A6Q5VVP1 1343 aa11.88□□□□□ -0.51
CNKSR1-205ENST00000480617 PRDM15P57071 1507 aaPredicted RBP11.88□□□□□ -0.51
CNKSR1-205ENST00000480617 SETD1AO15047 1707 aaKnown RBP11.86□□□□□ -0.51
CNKSR1-205ENST00000480617 CFAP65Q6ZU64 1925 aaKnown RBP11.86□□□□□ -0.51
CNKSR1-205ENST00000480617 RXRBP28702 533 aa11.86□□□□□ -0.51
CNKSR1-205ENST00000480617 MSH6P52701 1360 aa11.86□□□□□ -0.51
CNKSR1-205ENST00000480617 MAST1Q9Y2H9 1570 aa11.86□□□□□ -0.51
CNKSR1-205ENST00000480617 EIF2AK4Q9P2K8 1649 aaKnown RBP11.86□□□□□ -0.51
CNKSR1-205ENST00000480617 FGD6Q6ZV73 1430 aa11.86□□□□□ -0.51
CNKSR1-205ENST00000480617 TRIM52Q96A61 297 aa11.85□□□□□ -0.51
CNKSR1-205ENST00000480617 STAG3Q9UJ98 1225 aa11.85□□□□□ -0.51
CNKSR1-205ENST00000480617 NCOA3Q9Y6Q9 1424 aa11.84□□□□□ -0.51
CNKSR1-205ENST00000480617 NKTRP30414 1462 aaKnown RBP11.83□□□□□ -0.52
CNKSR1-205ENST00000480617 LRP6O75581 1613 aa11.83□□□□□ -0.52
CNKSR1-205ENST00000480617 CDK12Q9NYV4 1490 aaPredicted RBP11.83□□□□□ -0.52
CNKSR1-205ENST00000480617 PIAS4Q8N2W9 510 aaPredicted RBP11.82□□□□□ -0.52
CNKSR1-205ENST00000480617 PIK3C2BO00750 1634 aa11.82□□□□□ -0.52
CNKSR1-205ENST00000480617 KDM5AP29375 1690 aaKnown RBP11.81□□□□□ -0.52
CNKSR1-205ENST00000480617 EFCAB6Q5THR3 1501 aa11.81□□□□□ -0.52
CNKSR1-205ENST00000480617 DUOX2Q9NRD8 1548 aa11.81□□□□□ -0.52
CNKSR1-205ENST00000480617 PHLPP1O60346 1717 aa11.81□□□□□ -0.52
CNKSR1-205ENST00000480617 SLC52A1Q9NWF4 448 aa11.81□□□□□ -0.52
CNKSR1-205ENST00000480617 TBX22Q9Y458 520 aa11.81□□□□□ -0.52
CNKSR1-205ENST00000480617 COL16A1Q07092 1604 aaPredicted RBP11.81□□□□□ -0.52
CNKSR1-205ENST00000480617 CEP152O94986 1710 aa11.8□□□□□ -0.52
CNKSR1-205ENST00000480617 NWD1Q149M9 1564 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms