RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 CD109Q6YHK3 1445 aa15.42■□□□□ 0.06
LINC00173-203ENST00000480237 ATP7AQ04656 1500 aa15.4■□□□□ 0.06
LINC00173-203ENST00000480237 UNC13BO14795 1591 aa15.4■□□□□ 0.06
LINC00173-203ENST00000480237 HECW2Q9P2P5 1572 aa15.39■□□□□ 0.05
LINC00173-203ENST00000480237 TSPY4P0CV99 314 aa15.39■□□□□ 0.05
LINC00173-203ENST00000480237 TSPY10P0CW01 314 aa15.39■□□□□ 0.05
LINC00173-203ENST00000480237 RSPH4AQ5TD94 716 aa15.38■□□□□ 0.05
LINC00173-203ENST00000480237 CLSPNQ9HAW4 1339 aa15.38■□□□□ 0.05
LINC00173-203ENST00000480237 DUOX2Q9NRD8 1548 aa15.37■□□□□ 0.05
LINC00173-203ENST00000480237 TRAPPC8Q9Y2L5 1435 aa15.37■□□□□ 0.05
LINC00173-203ENST00000480237 KDM5CP41229 1560 aa15.37■□□□□ 0.05
LINC00173-203ENST00000480237 NEO1Q92859 1461 aa15.37■□□□□ 0.05
LINC00173-203ENST00000480237 KIF15Q9NS87 1388 aa15.37■□□□□ 0.05
LINC00173-203ENST00000480237 EIF2AK4Q9P2K8 1649 aaKnown RBP15.36■□□□□ 0.05
LINC00173-203ENST00000480237 ANKRD50Q9ULJ7 1429 aa15.35■□□□□ 0.05
LINC00173-203ENST00000480237 ZNF518AQ6AHZ1 1483 aa15.35■□□□□ 0.05
LINC00173-203ENST00000480237 SCAPERQ9BY12 1400 aa15.34■□□□□ 0.05
LINC00173-203ENST00000480237 DEPDC5O75140 1603 aa15.34■□□□□ 0.05
LINC00173-203ENST00000480237 IQGAP3Q86VI3 1631 aa15.34■□□□□ 0.05
LINC00173-203ENST00000480237 ABCA6Q8N139 1617 aa15.33■□□□□ 0.05
LINC00173-203ENST00000480237 KDM5DQ9BY66 1539 aa15.33■□□□□ 0.04
LINC00173-203ENST00000480237 ACIN1Q9UKV3 1341 aaKnown RBP15.32■□□□□ 0.04
LINC00173-203ENST00000480237 POGZQ7Z3K3 1410 aa15.31■□□□□ 0.04
LINC00173-203ENST00000480237 TEX14Q8IWB6 1497 aa15.31■□□□□ 0.04
LINC00173-203ENST00000480237 FRMPD1Q5SYB0 1578 aa15.31■□□□□ 0.04
LINC00173-203ENST00000480237 TRIM52Q96A61 297 aa15.31■□□□□ 0.04
LINC00173-203ENST00000480237 CEP152O94986 1710 aa15.31■□□□□ 0.04
LINC00173-203ENST00000480237 RTEL1-TNFRSF6BF6WH68 1400 aa15.3■□□□□ 0.04
LINC00173-203ENST00000480237 CFAP65Q6ZU64 1925 aaKnown RBP15.3■□□□□ 0.04
LINC00173-203ENST00000480237 BCORL1Q5H9F3 1711 aa15.29■□□□□ 0.04
LINC00173-203ENST00000480237 FKBP8Q14318 412 aa15.29■□□□□ 0.04
LINC00173-203ENST00000480237 SPAG9O60271 1321 aaKnown RBP15.29■□□□□ 0.04
LINC00173-203ENST00000480237 ERBINQ96RT1 1412 aa15.29■□□□□ 0.04
LINC00173-203ENST00000480237 PZPP20742 1482 aa15.28■□□□□ 0.04
LINC00173-203ENST00000480237 DENND4BO75064 1496 aaPredicted RBP15.27■□□□□ 0.03
LINC00173-203ENST00000480237 FAM69CQ0P6D2 419 aa15.27■□□□□ 0.03
LINC00173-203ENST00000480237 RNF17Q9BXT8 1623 aaKnown RBP15.26■□□□□ 0.03
LINC00173-203ENST00000480237 DIP2CQ9Y2E4 1556 aa15.26■□□□□ 0.03
LINC00173-203ENST00000480237 ZMYM4Q5VZL5 1548 aa15.26■□□□□ 0.03
LINC00173-203ENST00000480237 MAGI2Q86UL8 1455 aa15.25■□□□□ 0.03
LINC00173-203ENST00000480237 SPHKAPQ2M3C7 1700 aa15.25■□□□□ 0.03
LINC00173-203ENST00000480237 TET3O43151 1660 aa15.25■□□□□ 0.03
LINC00173-203ENST00000480237 FAM135AQ9P2D6 1515 aa15.25■□□□□ 0.03
LINC00173-203ENST00000480237 SPDYE4A6NLX3 237 aa15.24■□□□□ 0.03
LINC00173-203ENST00000480237 AFAP1Q8N556 730 aa15.24■□□□□ 0.03
LINC00173-203ENST00000480237 E9PCH4 1651 aa15.24■□□□□ 0.03
LINC00173-203ENST00000480237 MYT1LQ9UL68 1186 aa15.23■□□□□ 0.03
LINC00173-203ENST00000480237 MLH3Q9UHC1 1453 aa15.23■□□□□ 0.03
LINC00173-203ENST00000480237 MROH1Q8NDA8 1641 aa15.22■□□□□ 0.03
LINC00173-203ENST00000480237 PRDM15P57071 1507 aaPredicted RBP15.21■□□□□ 0.03
LINC00173-203ENST00000480237 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
LINC00173-203ENST00000480237 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
LINC00173-203ENST00000480237 SPDYE2Q495Y8 402 aa15.2■□□□□ 0.02
LINC00173-203ENST00000480237 MPHOSPH9Q99550 1183 aa15.2■□□□□ 0.02
LINC00173-203ENST00000480237 ZNF692Q9BU19 519 aaPredicted RBP15.2■□□□□ 0.02
LINC00173-203ENST00000480237 RBM42Q9BTD8 480 aaKnown RBP15.19■□□□□ 0.02
LINC00173-203ENST00000480237 ZC3H13Q5T200 1668 aaKnown RBP15.19■□□□□ 0.02
LINC00173-203ENST00000480237 NUP155O75694 1391 aa15.19■□□□□ 0.02
LINC00173-203ENST00000480237 A2MP01023 1474 aa15.18■□□□□ 0.02
LINC00173-203ENST00000480237 KIF1BO60333 1816 aa15.18■□□□□ 0.02
LINC00173-203ENST00000480237 ARHGEF40Q8TER5 1519 aa15.16■□□□□ 0.02
LINC00173-203ENST00000480237 VWDEQ8N2E2 1590 aa15.16■□□□□ 0.02
LINC00173-203ENST00000480237 CAMSAP1Q5T5Y3 1602 aa15.16■□□□□ 0.02
LINC00173-203ENST00000480237 NEUROD1Q13562 356 aa15.15■□□□□ 0.02
LINC00173-203ENST00000480237 SIN3AQ96ST3 1273 aa15.15■□□□□ 0.02
LINC00173-203ENST00000480237 SIGLEC1Q9BZZ2 1709 aa15.13■□□□□ 0.01
LINC00173-203ENST00000480237 REREQ9P2R6 1566 aa15.13■□□□□ 0.01
LINC00173-203ENST00000480237 DHX29Q7Z478 1369 aaKnown RBP15.13■□□□□ 0.01
LINC00173-203ENST00000480237 TONSLQ96HA7 1378 aa15.13■□□□□ 0.01
LINC00173-203ENST00000480237 RAPGEF3O95398 923 aa15.12■□□□□ 0.01
LINC00173-203ENST00000480237 RPRD2Q5VT52 1461 aaKnown RBP15.12■□□□□ 0.01
LINC00173-203ENST00000480237 EFCAB6Q5THR3 1501 aa15.11■□□□□ 0.01
LINC00173-203ENST00000480237 ANKRD30BQ9BXX2 1392 aa15.11■□□□□ 0.01
LINC00173-203ENST00000480237 KANK1Q14678 1352 aa15.1■□□□□ 0.01
LINC00173-203ENST00000480237 PKD2Q13563 968 aa15.1■□□□□ 0.01
LINC00173-203ENST00000480237 DNAJC5Q9H3Z4 198 aa15.1■□□□□ 0.01
LINC00173-203ENST00000480237 YEATS2Q9ULM3 1422 aa15.09■□□□□ 0.01
LINC00173-203ENST00000480237 CLTCQ00610 1675 aaKnown RBP15.08■□□□□ 0.01
LINC00173-203ENST00000480237 MYO5BQ9ULV0 1848 aa15.08■□□□□ 0
LINC00173-203ENST00000480237 SSUH2Q9Y2M2 353 aa15.07■□□□□ 0
LINC00173-203ENST00000480237 CLTCL1P53675 1640 aa15.07■□□□□ 0
LINC00173-203ENST00000480237 KIF3BO15066 747 aa15.07■□□□□ 0
LINC00173-203ENST00000480237 TIMELESSQ9UNS1 1208 aa15.07■□□□□ 0
LINC00173-203ENST00000480237 TRPM2O94759 1503 aa15.06■□□□□ 0
LINC00173-203ENST00000480237 LMTK2Q8IWU2 1503 aa15.06■□□□□ 0
LINC00173-203ENST00000480237 POLR1AO95602 1720 aaPredicted RBP15.05■□□□□ -0
LINC00173-203ENST00000480237 PREX1Q8TCU6 1659 aa15.05■□□□□ -0
LINC00173-203ENST00000480237 ABCC3O15438 1527 aa15.05■□□□□ -0
LINC00173-203ENST00000480237 ATP10AO60312 1499 aa15.04■□□□□ -0
LINC00173-203ENST00000480237 IFT172Q9UG01 1749 aa15.04■□□□□ -0
LINC00173-203ENST00000480237 MROH2AA6NES4 1674 aa15.04■□□□□ -0
LINC00173-203ENST00000480237 COL17A1Q9UMD9 1497 aaPredicted RBP15.03■□□□□ -0
LINC00173-203ENST00000480237 AGLP35573 1532 aa15.03■□□□□ -0
LINC00173-203ENST00000480237 AKT1S1Q96B36 256 aa15.02□□□□□ -0.01
LINC00173-203ENST00000480237 FER1L4A9Z1Z3 1794 aa15.01□□□□□ -0.01
LINC00173-203ENST00000480237 CCDC144AA2RUR9 1427 aa15.01□□□□□ -0.01
LINC00173-203ENST00000480237 PPLO60437 1756 aa14.99□□□□□ -0.01
LINC00173-203ENST00000480237 PLA2R1Q13018 1463 aa14.97□□□□□ -0.01
LINC00173-203ENST00000480237 TRPM1Q7Z4N2 1603 aa14.97□□□□□ -0.01
LINC00173-203ENST00000480237 PIK3C2BO00750 1634 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms