RNA–Protein interactions for RNA: ENST00000479994.1

HCLS1-206, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-206ENST00000479994 SHANK2Q9UPX8 1470 aa17.49■□□□□ 0.39
HCLS1-206ENST00000479994 ABCC1P33527 1531 aa17.48■□□□□ 0.39
HCLS1-206ENST00000479994 MYO3AQ8NEV4 1616 aa17.48■□□□□ 0.39
HCLS1-206ENST00000479994 CROCC2H7BZ55 1655 aa17.48■□□□□ 0.39
HCLS1-206ENST00000479994 CNTLNQ9NXG0 1405 aa17.47■□□□□ 0.39
HCLS1-206ENST00000479994 DNMT1P26358 1616 aaKnown RBP17.47■□□□□ 0.39
HCLS1-206ENST00000479994 ABCA6Q8N139 1617 aa17.47■□□□□ 0.39
HCLS1-206ENST00000479994 MROH2AA6NES4 1674 aa17.46■□□□□ 0.39
HCLS1-206ENST00000479994 CEP170BQ9Y4F5 1589 aaPredicted RBP17.46■□□□□ 0.39
HCLS1-206ENST00000479994 KDM5CP41229 1560 aa17.45■□□□□ 0.38
HCLS1-206ENST00000479994 ADGBQ8N7X0 1667 aa17.44■□□□□ 0.38
HCLS1-206ENST00000479994 ZNF518AQ6AHZ1 1483 aa17.44■□□□□ 0.38
HCLS1-206ENST00000479994 FAM50AQ14320 339 aaKnown RBP17.43■□□□□ 0.38
HCLS1-206ENST00000479994 AFAP1Q8N556 730 aa17.43■□□□□ 0.38
HCLS1-206ENST00000479994 UPF1Q92900 1129 aaKnown RBP eCLIP17.43■□□□□ 0.38
HCLS1-206ENST00000479994 ZNF777Q9ULD5 760 aaPredicted RBP17.42■□□□□ 0.38
HCLS1-206ENST00000479994 CCDC141Q6ZP82 1450 aa17.42■□□□□ 0.38
HCLS1-206ENST00000479994 SYCP2Q9BX26 1530 aa17.42■□□□□ 0.38
HCLS1-206ENST00000479994 MYT1LQ9UL68 1186 aa17.41■□□□□ 0.38
HCLS1-206ENST00000479994 ZMYM3Q14202 1370 aa17.4■□□□□ 0.38
HCLS1-206ENST00000479994 MAST1Q9Y2H9 1570 aa17.4■□□□□ 0.38
HCLS1-206ENST00000479994 POLR1AO95602 1720 aaPredicted RBP17.4■□□□□ 0.38
HCLS1-206ENST00000479994 VWDEQ8N2E2 1590 aa17.39■□□□□ 0.37
HCLS1-206ENST00000479994 NEURL4Q96JN8 1562 aa17.38■□□□□ 0.37
HCLS1-206ENST00000479994 DAPK1P53355 1430 aa17.38■□□□□ 0.37
HCLS1-206ENST00000479994 MBD5Q9P267 1494 aa17.37■□□□□ 0.37
HCLS1-206ENST00000479994 TSPY4P0CV99 314 aa17.37■□□□□ 0.37
HCLS1-206ENST00000479994 TSPY10P0CW01 314 aa17.37■□□□□ 0.37
HCLS1-206ENST00000479994 ACIN1Q9UKV3 1341 aaKnown RBP17.35■□□□□ 0.37
HCLS1-206ENST00000479994 MLH3Q9UHC1 1453 aa17.35■□□□□ 0.37
HCLS1-206ENST00000479994 RTEL1-TNFRSF6BF6WH68 1400 aa17.34■□□□□ 0.37
HCLS1-206ENST00000479994 PLXNC1O60486 1568 aa17.34■□□□□ 0.37
HCLS1-206ENST00000479994 ROCK1Q13464 1354 aa17.34■□□□□ 0.37
HCLS1-206ENST00000479994 RNF17Q9BXT8 1623 aaKnown RBP17.33■□□□□ 0.37
HCLS1-206ENST00000479994 ABCC5O15440 1437 aa17.33■□□□□ 0.36
HCLS1-206ENST00000479994 ZNF644Q9H582 1327 aaPredicted RBP17.33■□□□□ 0.36
HCLS1-206ENST00000479994 CLTCQ00610 1675 aaKnown RBP17.32■□□□□ 0.36
HCLS1-206ENST00000479994 INO80Q9ULG1 1556 aaPredicted RBP17.32■□□□□ 0.36
HCLS1-206ENST00000479994 ADGRL2O95490 1459 aa17.32■□□□□ 0.36
HCLS1-206ENST00000479994 GCC2Q8IWJ2 1684 aa17.32■□□□□ 0.36
HCLS1-206ENST00000479994 STRCP1A6NGW2 1772 aa17.31■□□□□ 0.36
HCLS1-206ENST00000479994 HNRNPMP52272 730 aaKnown RBP eCLIP17.31■□□□□ 0.36
HCLS1-206ENST00000479994 ANKRD30AQ9BXX3 1397 aa17.3■□□□□ 0.36
HCLS1-206ENST00000479994 ATP7AQ04656 1500 aa17.3■□□□□ 0.36
HCLS1-206ENST00000479994 LRRC7Q96NW7 1537 aa17.29■□□□□ 0.36
HCLS1-206ENST00000479994 A2ML1A8K2U0 1454 aa17.29■□□□□ 0.36
HCLS1-206ENST00000479994 SPAG9O60271 1321 aaKnown RBP17.28■□□□□ 0.36
HCLS1-206ENST00000479994 KIDINS220Q9ULH0 1771 aa17.28■□□□□ 0.36
HCLS1-206ENST00000479994 HFM1A2PYH4 1435 aa17.25■□□□□ 0.35
HCLS1-206ENST00000479994 ITGAEP38570 1179 aa17.24■□□□□ 0.35
HCLS1-206ENST00000479994 DUOX2Q9NRD8 1548 aa17.24■□□□□ 0.35
HCLS1-206ENST00000479994 EIF2AK4Q9P2K8 1649 aaKnown RBP17.23■□□□□ 0.35
HCLS1-206ENST00000479994 SYNMO15061 1565 aa17.22■□□□□ 0.35
HCLS1-206ENST00000479994 PCGF6Q9BYE7 350 aa17.21■□□□□ 0.35
HCLS1-206ENST00000479994 ERBINQ96RT1 1412 aa17.2■□□□□ 0.34
HCLS1-206ENST00000479994 KIF15Q9NS87 1388 aa17.19■□□□□ 0.34
HCLS1-206ENST00000479994 HRCP23327 699 aa17.19■□□□□ 0.34
HCLS1-206ENST00000479994 TRIM52Q96A61 297 aa17.19■□□□□ 0.34
HCLS1-206ENST00000479994 ANKLE2Q86XL3 938 aa17.18■□□□□ 0.34
HCLS1-206ENST00000479994 NPHP4O75161 1426 aaPredicted RBP17.18■□□□□ 0.34
HCLS1-206ENST00000479994 SETD5Q9C0A6 1442 aa17.18■□□□□ 0.34
HCLS1-206ENST00000479994 MED14O60244 1454 aa17.18■□□□□ 0.34
HCLS1-206ENST00000479994 NAIPQ13075 1403 aa17.17■□□□□ 0.34
HCLS1-206ENST00000479994 CHIC2Q9UKJ5 165 aa17.17■□□□□ 0.34
HCLS1-206ENST00000479994 XIRP1Q702N8 1843 aaKnown RBP17.17■□□□□ 0.34
HCLS1-206ENST00000479994 IQGAP1P46940 1657 aa17.16■□□□□ 0.34
HCLS1-206ENST00000479994 DEPDC5O75140 1603 aa17.16■□□□□ 0.34
HCLS1-206ENST00000479994 FAM135BQ49AJ0 1406 aa17.15■□□□□ 0.34
HCLS1-206ENST00000479994 ANKRD50Q9ULJ7 1429 aa17.14■□□□□ 0.33
HCLS1-206ENST00000479994 A2MP01023 1474 aa17.14■□□□□ 0.33
HCLS1-206ENST00000479994 DHX29Q7Z478 1369 aaKnown RBP17.13■□□□□ 0.33
HCLS1-206ENST00000479994 RRP7BPQ9NSQ0 103 aa17.12■□□□□ 0.33
HCLS1-206ENST00000479994 FAM135AQ9P2D6 1515 aa17.11■□□□□ 0.33
HCLS1-206ENST00000479994 UNC13BO14795 1591 aa17.11■□□□□ 0.33
HCLS1-206ENST00000479994 ROBO1Q9Y6N7 1651 aa17.1■□□□□ 0.33
HCLS1-206ENST00000479994 RAB3GAP2Q9H2M9 1393 aa17.08■□□□□ 0.32
HCLS1-206ENST00000479994 GGT6Q6P531 493 aa17.08■□□□□ 0.32
HCLS1-206ENST00000479994 ZC3H13Q5T200 1668 aaKnown RBP17.07■□□□□ 0.32
HCLS1-206ENST00000479994 TNRQ92752 1358 aa17.06■□□□□ 0.32
HCLS1-206ENST00000479994 THEMISQ8N1K5 641 aaPredicted RBP17.06■□□□□ 0.32
HCLS1-206ENST00000479994 KDM5DQ9BY66 1539 aa17.06■□□□□ 0.32
HCLS1-206ENST00000479994 FBXO31Q5XUX0 539 aaPredicted RBP17.05■□□□□ 0.32
HCLS1-206ENST00000479994 KANK1Q14678 1352 aa17.04■□□□□ 0.32
HCLS1-206ENST00000479994 IQGAP3Q86VI3 1631 aa17.04■□□□□ 0.32
HCLS1-206ENST00000479994 SETBP1Q9Y6X0 1596 aa17.04■□□□□ 0.32
HCLS1-206ENST00000479994 ZNF772Q68DY9 489 aaPredicted RBP17.04■□□□□ 0.32
HCLS1-206ENST00000479994 PRDM15P57071 1507 aaPredicted RBP17.04■□□□□ 0.32
HCLS1-206ENST00000479994 UGGT1Q9NYU2 1555 aa17.02■□□□□ 0.32
HCLS1-206ENST00000479994 CDK12Q9NYV4 1490 aaPredicted RBP17.02■□□□□ 0.32
HCLS1-206ENST00000479994 LRP6O75581 1613 aa17.01■□□□□ 0.31
HCLS1-206ENST00000479994 RXRBP28702 533 aa17.01■□□□□ 0.31
HCLS1-206ENST00000479994 PHLPP1O60346 1717 aa17.01■□□□□ 0.31
HCLS1-206ENST00000479994 JCADQ9P266 1359 aa17.01■□□□□ 0.31
HCLS1-206ENST00000479994 KIF3BO15066 747 aa16.99■□□□□ 0.31
HCLS1-206ENST00000479994 TET3O43151 1660 aa16.98■□□□□ 0.31
HCLS1-206ENST00000479994 ZRANB1Q9UGI0 708 aa16.98■□□□□ 0.31
HCLS1-206ENST00000479994 MROH1Q8NDA8 1641 aa16.97■□□□□ 0.31
HCLS1-206ENST00000479994 LMTK2Q8IWU2 1503 aa16.96■□□□□ 0.31
HCLS1-206ENST00000479994 NLRP1Q9C000 1473 aa16.96■□□□□ 0.31
HCLS1-206ENST00000479994 PZPP20742 1482 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms